Oncorhynchus tshawytscha (Chinook salmon): 112260296
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Entry
112260296 CDS
T05605
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112260296
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
112260296
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
DALR_1
Ion_trans
Motif
Other DBs
NCBI-GeneID:
112260296
NCBI-ProteinID:
XP_024291061
UniProt:
A0AAZ3P4K9
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Position
LG10:complement(46127825..46190536)
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AA seq
970 aa
AA seq
DB search
MRHRYAGAVYQHQIPDEERGSVQSQDPNPVAPVFSLPPPPPSFRERSTTTSHYLNHHQLP
CLSKPSRRGIHACQPQHGDPPPLTSYDIAQRPSHRVCEPAGQPAHLQQNLWAAAGSQPQS
EQPFFQSCHCNFSEEASLSHQRQRQPLAHPPQPSPSLPPSSSQLFLQESNHGDNLQSSDN
YQQASNVERYRGGGGGGHRDQKQLLQQQQQQHSRLQHRDPSPETTRANSQKGRTINVCES
IEANRRVFESQTQDLQQLQQLPQLRAQQQLLVGSSFPVYYCANGSGELCRNNQAPLLQQH
QQDAQGRPQHCDQDRNKPGRTNQANQPQHPNQPQHPNQPQHHCRDSRVNSPTQPYGGNSS
ATGSSSKSSPNYGSSYHLWPESPHKGEERILIDHHQATTEQKKLSHAGSSLSESSGRLPQ
IAMNTCKHNGGVVRPLGSLASSRRNLAELDSETQPLQTLHSSGLEVVVSKGNSEDPGKAS
NESLVRDGNGAPVKKNKDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWG
VYGKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIV
LELLVCAIHPIPGHYRFTWTARIAFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHSK
LFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDT
QEVTSNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLE
LTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQA
IHQAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGMLEDKLD
SVTGSLQALPCLISQAITQQQQEFLDGFLHRFRPASLGSERSERSERSWTSTARRRRSPS
TAPHTSSDSG
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcgatacgcgggagctgtctatcagcaccaaatccccgacgaagagcgaggc
agcgtgcagagccaagacccaaacccagtcgctcccgttttcagtctgccgccccctcct
ccgtctttcagagagcgttcgactaccacctcgcactacctgaaccaccaccaactgcct
tgtctgagcaagccctctcgaagaggtatccatgcctgtcagccgcagcacggcgacccc
ccgcctctgacaagctacgacatcgcccagcgaccttcacaccgggtctgtgaacccgca
gggcagccagcgcacctacagcagaacctttgggccgcagccggttcccagccgcagtcg
gagcagcctttttttcagagctgccactgcaatttttccgaggaggcgagcctttctcac
cagcgccagcgacagcccctcgctcacccgccgcagccctccccatctttgccgccgtcg
tcctctcagctgtttttgcaggagtctaatcacggggataatttgcaaagcagtgacaat
tatcaacaggcgagcaacgtggaacgctaccggggaggaggaggaggagggcaccgagac
cagaagcagttgttgcagcaacagcagcagcagcacagcagactccaacacagggacccc
tcccctgaaacaacccgagcaaactcacagaaggggcgcactataaatgtatgtgagtca
atcgaggctaatcggcgagtattcgagtcccagactcaggacctgcaacagctacagcaa
ctcccacaattgcgagctcaacaacagctactggtggggagcagcttccctgtctactac
tgcgccaacggttcaggagagctctgtcggaataaccaggcaccactgctgcaacagcat
cagcaagacgcacaggggcgtccgcagcactgtgaccaagaccgcaataagccagggagg
acaaaccaagccaaccagccacagcaccccaaccagccacagcaccccaaccagccgcag
caccattgccgcgactctcgtgtaaactcaccaacgcaaccgtacggagggaactcgtct
gcgactggcagtagcagcaagagcagccctaactacggctccagctatcacctgtggccc
gagagcccgcataagggagaagagaggatactcatcgatcatcatcaggcaaccactgag
caaaagaagctgagccatgctggatcctccctctccgagagcagcggccgactccctcag
atagccatgaacacctgcaagcacaatggcggcgtagtgagaccactgggcagcctggcg
tcgtcgcggcgcaacctagcagagctcgactccgaaacacagcccctccagacgctgcac
agttctggcctggaggtggttgtttccaagggaaacagtgaggaccccggcaaggcgtcc
aacgagagcctggtcagagacgggaacggtgctcctgtgaagaagaacaaagacatcggc
tatagactcggccaccggagggcactctttgagaagcgaaagagactcagtgactacgca
ctcatcttcgggatgtttgggattgtcgtcatggtgacggagacggaactgtcctgggga
gtttacggcaaggaatcttcgtactcatttgcactgaaatgccttatcagcctttccact
gttatattgcttggtcttataataatgtaccatgcccgggaaatccagctgttcatggtg
gacaatggggcggacgactggaggatagccatgacgtacgagcgcatcttcttcatcgtg
ctggagctgctggtgtgcgccatccaccccatcccgggccattaccgcttcacgtggacg
gcgcggatcgccttcacctacacgccgtcgacagccaacgccgacgtggacatcatcctc
tccattcccatgttcctgcgcctctacctgatcggccgtgtcatgctgctgcacagcaag
ctcttcacggacgcctcgtcgcgcagcatcggcgccctcaacaagatcaacttcaatacg
cgcttcgtcatgaagaccctcatgaccatctgccccggcaccgtgctgcttgtcttcagc
atctcctcctggatcattgccgcctggacggtgcgcgtctgcgagaggtatcatgacaca
caggaagtgaccagtaacttcctgggagccatgtggctcatctctattaccttcctctcc
attggctacggagacatggtacctaacacgtactgtgggaaaggcgtatgtctgcttaca
gggatcatgggagcgggctgcactgcactggtggtcgccgtggtagccaggaagttggag
ttgaccaaggctgagaagcatgtccacaacttcatgatggacacacaactctgcaaacga
gtaaagaacacagctgccaatgtactcagggaaacatggctcatctacaaacacactaag
ctggtcaagaagatagatcacgctaaggtgcgcaaacaccagcggaagtttctacaggcc
atccatcaagctcagaaactacgcagtgtaaagatggagcagaggaaactcaacgatcag
gccaacacgctagtggacctggcgaagacccagaacgtgatgtatgacctggtgtcagag
ctgcaggagcgcagcgaggagctagacaagcgcatcggcatgctggaggacaagctggac
tcggtgacgggcagcctacaggcactgccctgcctcatctcccaagccataacccagcag
cagcaggaatttctggacggtttcctgcaccgcttccggcctgcctcgctgggctcagag
cgctccgaacgctcagagcgctcctggacctccaccgcccgccgacgccgctcgccctcc
acggcgccacacacctcctctgacagcggctag
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