Oncorhynchus tshawytscha (Chinook salmon): 112260331
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Entry
112260331 CDS
T05605
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112260331
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112260331
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
112260331
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112260331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Coatomer_WDAD
WD40
NBCH_WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
112260331
NCBI-ProteinID:
XP_024291121
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All DBs
Position
LG10:47376586..47390823
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AA seq
944 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSAPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKLG
REEPAMSMDTNGKIIWAKHSEVQQANLKAMGDTEIKDGERLALAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELVRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLSEKVAASQENNEGVTEDGIEDAFEVQGEIQEVVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDSEHRFELSLQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNAAMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDHCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAADSLADPTEYENLFPGLKESFVAEQFLRETCLGNSRPATDYPLVTPNEERNILEDA
TGYEPKGVPLSLATLVPGEDCREEITLAAGVLASVLTPPAIPSEPEPEAAPEEEASPGSS
EALKNKALDELEDDLDNLELDDIDTADINLDNTDINLEDDFLDD
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaggctggacatcaagcggaagctgacagcccggtcagaccgggtgaagagt
gtggacctccacccgaccgagccgtggatgctggccagcctgtacaatggtagtgtctgc
gtctggaaccatgaaacacagaccttggtgaagacctttgaagtgtgtgaccttccagtg
agagcatcgaagtttgtagccaggaagaactgggtcataacaggagccgatgacatgcag
atccgtgtgttcaactacaacaccctggagagggttcacatgtttgaggcccactctgac
tacatccgttgtattgccgtgcatcccacccagccctacatcctcacaagcagtgacgac
atgctgattaagctgtgggactgggagaagaagtggtcttgcagccaggtgttcgagggc
cacacccactacgtcatgcagatcgtcatcaaccctaaagacaacaaccaatttgccagc
gcttctctggacagaaccatcaaggtttggcagctaggctcctctgctcctaacttcacc
cttgagggccatgagaaaggtgtcaactgcattgactactacagtggaggggacaagccc
taccttatatcaggagctgatgaccgcctggtcaagatctgggactaccagaacaagacg
tgtgtgcagaccctggagggacatgcccagaatgtgtcgtgtgtcagctttcacccagag
ctgcccatcatcatcacaggctcagaggacggcactgtgcgcatctggcactcgagtacg
taccgtctggagagcacgctgaactacggcatggagcgcgtgtggtgtgtgtgtggcctg
cgaggctccaacaacgtggccctgggttacgacgaaggcagcatcatcatcaagctgggg
cgtgaggagccagccatgtccatggacaccaatgggaagatcatctgggccaagcactca
gaggtgcagcaggccaacctgaaggccatgggcgacacggagatcaaggacggagagagg
ctggcgctggccgtcaaagacatgggcagctgtgagatctacccccagaccattcagcac
aaccccaacggaaggtttgttgtggtgtgtggagacggagagtacatcatctacactgcc
atggcactgaggaacaagagcttcggctcagcccaagagtttgtctgggcacatgactcc
tctgagtatgccatcagagaaagcaacagtgtggtcaaaatcttcaagaacttcaaagag
aagaagtctttcaagccagactttggggctgaaggtatctatggaggcttcttgctgggc
gtcaggtcggtgaacggtctggccttctatgactgggagaacacagagctggtccgccgc
attgagatccagcccaaacatatcttctggtcagactcaggggagttggtgtgtatagcc
acagaggagtccttcttcatcctgcgctacctgtccgagaaagtagccgcctcccaagag
aacaacgagggagtgacggaggatggcatcgaagacgcctttgaggtccagggggagatc
caggaagtggtgaagacaggtctgtgggtgggagactgcttcatctacaccagctctgtc
aacagactcaactactttgtggggggagagattgtcaccatcgctcacctggacagaacc
atgtacctgctgggctacatccccaaggacgaccgcctgtacctgggcgacaaagagctg
aacatcgtcagctactccctgctggtgtctgtgctggagtaccagacagctgtgatgcgc
agggactttggcatggccgacaaagtgttgcccaccatccccaaggaacagaggacccgt
gtggcccacttcctggagaaacagggcttcaagcagcaggctctggccgtgtcgtcagac
tcggagcacaggtttgagctgtccctgcagcttggggagttgaagatcgcctatcagctg
gctgtggaggcagagtcggagcagaagtggaagcagctggcagagctggccatcagtaag
tgccagtttagcctggcccaggagtgcctccatcatgcccaggactacggcggcctgcta
ctgctcgccacggcctcgggcaacgctgccatggtgggcaagctggccgagggcgctgag
cgggacggcaagaacaacgtggccttcatgacttatttcctgcaggggaaactggaccac
tgtctggagctgctgatccggaccaaccggctgcccgaggcagccttcctggcccgcacc
tacctgcccagccaggtgtccagggtggtcaagctgtggagggagagcctggccaaggtc
aaccagaaggcggccgactcgctggccgaccccaccgagtatgagaacctattccccggt
ctgaaggagtcgtttgtggccgagcagttcctccgggagacctgcctgggcaactcccgg
ccagccaccgactaccctctggtcacacccaatgaagaacgtaatatactagaggatgcc
acgggctacgagcccaaaggagttcccctctcacttgccacactggtaccaggtgaagac
tgcagggaggagatcacgttggctgctggagtgctggcatccgtgttgacgccccccgcg
atcccctcggagccagagcctgaggctgcacctgaagaggaggcgagccccggttcatct
gaggcactgaagaacaaggccctggacgaacttgaagatgacctagacaacttggagctg
gacgacatcgacaccgcggacattaacctggacaacacagacattaacctggaagatgac
ttcttagatgactga
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