Oncorhynchus tshawytscha (Chinook salmon): 112260393
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Entry
112260393 CDS
T05605
Symbol
gigyf2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112260393 (gigyf2)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112260393 (gigyf2)
Surveillance factors
Other surveillance factors
112260393 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
112260393
NCBI-ProteinID:
XP_024291220
LinkDB
All DBs
Position
LG10:complement(50257828..50295449)
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AA seq
1452 aa
AA seq
DB search
MRVVIAACLLGLEAWDSSMWEHRIGSEREVLERMAETQTLNFGPEWLRALSGGGHGGGSS
SSVATSPPLSPALPKYKLADYRYGREEMLALYVKDREIPVDLHDKDFLPILQEEPLPPLA
LVAFTEEEQRNFSMSVNSAAVLRLMGRGGGPVGPGAPRGRSTSRGRGRGRGDGGFYQRSF
DDVEGGFGRGGREMHRSQSWEESHAESIFSPSRGDRRFEKPGRKESEVAPAHFPMNHIRA
NYEDVGTGVGGLPVRKHDFTRSESENWRTSRDEANGEDGDEGGWRLAGASRRDSDRWCPP
SPDGLRSAVRREVHPGEQPRQRRFPFDAREDERGYRRPRSGSGSLEEDGSSLPEWCLEDA
EEETGTFDSSGAFLSLKVRKAPKEPILEEAELDFRPLEECDEGLEEDGQPRETKNPDREA
RRDPDRKQDVGRGVVEAPPAPSPPEPQPSAPLLPPSQPDRAEEPERPLDRPPAPQHRPEA
NKVPLNVPMSMPMSNTMLDSLPIPHTAAHTLTVSPVSAPSSTIQMQQKPPDVPVAMPVPL
PFSTSLMAQSTSIMTPNIMAPSTGLMAPIGRPTVMPPHHTMVEDERLKHFEQEAEKMVAY
LQDSDDRLAAKNSAPEPAGLPLTHEAALKWFYKDPQGEMQGPFSNPEMTEWFQAGYFTMT
LLVKRGCDEVFQPLGEIIKMWGRVPFAPGPAPPPLLGDAGDQERLKLQQELTALNLYQLQ
QLQYQYLLRQQYAQALAQQKAQALSSAPHQQQQQQQQQINLLLQQYQALKMRSAEHTTSE
SLLTPVTRSMSVPDSQGSVWEMQHPSSQVSCAPNIQQPVPSAWEGSSVWDLPIDSMAQAP
TIEQMQQLEKNKAAKVSPPHLLEMERREAELRAKREEEEKERKRLEEALRSRQEAERKRL
EEELSRHKQEEELRQREQEEAQRRQKEEEERQAQEEALRRLEERRREEEERQQREEFLRK
QEEEHRKQEEERREEERRKQEEERRKQEELEALRRCEEEKRLEEEAVAAVIALARQQQEE
AKRREQEAARQQELARQQELARQRQQQQEALRRLQQQQQQQQLAQMKLPSSSKWGQQSAV
TSAAISQSQNALSLSEIQKVEEERERQAREEQRRQQAELLKLQQQQALQEALQPQAKLSG
WGSVAKQPAATKSLLEIQREEAQQVKQRKEQGGGSQQPSHPTVTQSNRAQNRATTALSSS
VWGSVATSSMGGGAPNWGGESSSIWGDSTNSNMGFWDETAQPPPQAPPPARKPNAQKNNK
ANANLSSRANKKVEEEEKLLKLFQGVNKSQQDGFMQWCEQTLHTLNTANNLDVPTFASFL
KEVDSPYEVHDYVRAYLGDTSEAKEFAKQFLERRAKQKANQQKEPQAPQNQQPTLKQQQQ
DSVWGVSGMGSPSRYQSNHTSLQQQARFETVTSGKKKKKQKMVRADPSLLGFSVNAASER
LNMGEIETVEDF
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgagggttgttatagcagcatgtttgcttggccttgaggcttgggactcaagtatgtgg
gagcaccgcattggatcagagcgagaagttctagaaagaatggcagaaactcagacactc
aacttcggaccagaatggctccgggccctgtctgggggtggccatgggggtgggagcagc
agtagcgttgccacctcaccaccactctctcctgcattgccaaagtataaacttgcggac
taccgctacgggagagaagaaatgctagcactttatgtcaaggatagggagatccctgta
gacctacatgataaggattttctgcccattttacaagaggagcccctgccaccgctggca
cttgtagcttttacagaggaagagcagagaaatttctccatgtctgtaaacagtgcagcg
gtgctcaggctgatgggaagaggagggggcccggtggggccaggggcaccgaggggtcga
agcacttcacggggaagaggacggggtagaggagatggagggttttaccaaagaagtttt
gatgacgtggagggaggctttggccgcggaggcagggagatgcaccgctcccagagctgg
gaggagagtcacgctgagtctattttctccccatctaggggagacagaaggtttgaaaag
ccaggtcgaaaagagtcagaagttgctcctgcccactttccgatgaatcatatccgtgct
aactacgaggatgttgggaccggcgtgggaggcctgcctgtgaggaagcatgattttaca
cgttcggagagcgagaactggcgcacgtcccgcgacgaagcaaatggtgaggacggtgac
gaggggggctggcgcctggcgggtgcctcgcgacgcgacagtgaccggtggtgccccccg
agtccagacgggctgcggtcggcagtgcggcgagaggtgcacccgggggagcagccacgg
cagcgccggttcccgttcgacgccagagaggacgagcgtggctacaggcgtccccggtca
ggcagtggcagcctggaggaggatgggagcagcctgccagagtggtgcttggaggacgct
gaggaggagacgggcaccttcgattcgtccggagccttcctctcgctcaaggttcgaaaa
gctccgaaggagcccatcctggaggaggcagagctggacttcagacccctggaggagtgt
gacgagggccttgaggaggacggacagccccgggagaccaaaaacccagacagagaggca
agaagagaccccgacagaaaacaggatgtggggagaggggtagtagaggcgccgcctgct
ccctcgcctccagaaccccagccctccgcccctctgctgccccccagccagcccgacaga
gcagaggagcctgagaggccacttgaccgacccccagccccgcaacacaggccagaagcc
aacaaagtccccctgaacgtccccatgtcgatgcccatgtccaacacaatgctggactcc
ctccccatcccccacaccgcagcacacactctcacagtgtctccagtgtcggccccgtcg
tccaccatacagatgcagcagaagcccccggacgtgcccgtggctatgcctgtcccgctg
cccttcagcaccagcctcatggctcagagcacgtctatcatgacccccaacattatggcc
cccagcacgggcctcatggctcctattggaaggcccacggtcatgccgccacaccacacc
atggttgaagatgagagactgaagcactttgaacaggaagcagagaagatggtggcgtat
ctacaggacagtgacgaccggctggctgccaagaactcagcacccgaaccagccggcctg
ccgctcacacacgaggctgctctgaagtggttctataaagacccccagggagagatgcag
ggtccgttcagtaacccggagatgacagagtggttccaggcaggctacttcacaatgacc
ctgctggtgaagagaggctgtgacgaggtcttccaacccctgggggagatcatcaaaatg
tggggcagggtccccttcgcccctggaccagcaccgccacccttactgggtgacgctggg
gaccaggagcgtctgaaactgcagcaggagctgactgccctcaatctgtaccagctgcag
cagctgcagtaccagtacctgttgaggcagcaatacgcccaggccctggcccagcagaaa
gcccaggccctcagctcagcaccacaccagcagcagcagcagcagcagcagcagatcaac
ctgctcctccagcaataccaggccctcaagatgaggtcagcggaacacacaacatccgag
agtctcttaactccggtgacgcggtccatgtctgtaccagactcccagggttctgtgtgg
gaaatgcagcacccctcctctcaggtctcttgcgcaccaaacatccagcaacctgtccca
agtgcgtgggagggcagcagtgtgtgggatctgcccatagactccatggcccaggccccc
accatagaacagatgcaacagctggagaagaacaaggctgctaaggtctctcctcctcat
ctactggagatggagcggcgtgaggctgagctgagggccaagagggaagaggaggagaag
gagaggaaaagactggaggaagcgttacggtcccgacaggaggcggaacgcaaacgcctg
gaggaggagctatcacgtcataaacaggaggaggagttgaggcagcgggagcaggaggag
gcacagcgcagacagaaggaggaagaggaacggcaggcacaggaggaggctctccgcaga
ctagaggaaaggaggagggaggaggaagagcggcagcaaagggaagagttcctccgtaaa
caggaggaggagcaccggaagcaggaggaggagcgccgggaggaggagcgccggaagcag
gaggaggagcgccggaagcaggaggagctggaggccctgaggaggtgcgaggaggagaag
cggctggaggaggaggcggtggcggccgtgattgcgttggcaaggcaacagcaggaagag
gcgaagaggagggagcaggaggccgcgaggcagcaggagctagcgaggcagcaggagcta
gccagacagaggcaacagcagcaggaggcgctccgccgactacagcagcaacagcagcag
caacagctagcccagatgaagctgccgtcgtcctctaagtggggccagcagtcagcggtc
acgtcagcagccatctcccagtcccagaacgccttgtcgctctctgagatccagaaagtg
gaggaggagagggaacgacaagcacgagaagagcagcggcgccagcaagcagagctccta
aagctccagcagcagcaggccctgcaggaggccctgcagcctcaggccaagctctctggt
tggggcagcgtggccaagcagccggccgccaccaagtccctgctggagatccagagggag
gaggcccagcaggtgaagcagaggaaagagcaggggggtgggagccagcagcccagtcac
cccaccgtcacccagtcgaaccgcgcccagaacagagctaccactgctctgagttcctca
gtgtggggctcggtggccaccagcagcatgggcggcggagctcctaactggggcggagaa
agcagcagcatctggggcgacagcaccaactccaacatgggcttctgggacgagacggcc
cagcccccgccacaggccccaccccccgccaggaagcccaacgctcaaaagaacaacaag
gccaacgccaacctcagcagtcgggccaataagaaggtggaggaggaggagaagctgctg
aagttgttccagggggttaataagagccagcaggatggcttcatgcagtggtgtgagcag
accctgcacaccctcaacaccgccaacaacctggacgtcccgacatttgcgtctttcctg
aaggaggtggacagtccgtacgaggtgcacgactacgtgcgcgcctacttgggggacacg
tccgaggctaaggagtttgccaagcagttcctggaacgccgtgccaagcagaaggccaac
caacagaaagagccccaggccccacagaaccagcagccgactctcaaacagcaacagcag
gattcagtgtggggcgtgagcgggatgggctctccgtctcggtaccagtcgaaccacacc
agcctccagcagcaggcacgtttcgagaccgtcacttcagggaagaagaagaaaaagcag
aagatggtccgggcagaccccagcctgctaggtttttctgtgaacgcggcgtctgagagg
ttgaatatgggcgagatagagacggtggaggacttttaa
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