Oncorhynchus tshawytscha (Chinook salmon): 112260407
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Entry
112260407 CDS
T05605
Symbol
eif4g1a
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1a isoform X1
KO
K03260
translation initiation factor 4G
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112260407 (eif4g1a)
03012 Translation factors [BR:
otw03012
]
112260407 (eif4g1a)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112260407 (eif4g1a)
mRNA cycle factors
Stress granule specific factors
112260407 (eif4g1a)
Translation factors [BR:
otw03012
]
Eukaryotic type
Initiation factors
eIF-4
112260407 (eif4g1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
112260407
NCBI-ProteinID:
XP_042184609
LinkDB
All DBs
Position
LG10:49998527..50024638
Genome browser
AA seq
1826 aa
AA seq
DB search
MKALLLSVHLQDRLASQRHPNAEPSEMNKPPQPITGPTSVPHPSPSPGLTQAAYAPGQPP
SLVFATPPPQQMNSSPQPRQFAAGPRALHQQGGYRALQPYYANRATMSTSAPRVQTSSGP
RPVGPTHVYQPSSQMMMIPGQQLSFAGSPQGYFIPPGQYRAPYMPPSPQYPVTSGTAGFY
PGTSPAEYPTYEPSLAARERRGGGGRGGGRENGRLSLHGAPLTSQRYPAGAYYPAQPQYS
HTPPVQTAPVMISPAQPQQQALPPQPPPSQQLAPKRERIAIRIRDPNQGGRDITEEIMSG
GRATSTPPSQSSTTEGEGPSQTNGEVTKPVTMMTRTDDNTEPAETMAAMTPPPALVTPEP
ATATVSTEAKQEKDSLAAPPTEQVASQSAVPTAAEEAIPPEEDQAPPPSPSPPAAPTSPA
PAEVQTPPPSTTIAQVSDTVDAGVTLAGKAVTPEAPPIEEEPSAALAAVEKPPALVAEKE
EAENKKEEEVVVEEEIVEKVKQEPVLTTKPEVVAPVTVAVAKEHTKPAPRPLTPVATATI
KHSAPAVKPVVSVEAPTKTESVVEPTAPKQESAAAVPVSAPVPAVTPSVPEAEPAMAQKS
EVQTPLSNGLPQEYPDEVDAPVPAQERTAMPNTEPAVPTPQETAILADAAVAEEGEKEED
AATVPLASSPSEDTSMQAAVSVPKKKRNMKELNKKEAIGDMLDAFKEEKEAAAAPEPLST
LAEPSPVAPPPLVPADAPDETWEEKEDKQNADTPPLKPGDLKYQYKGEQWKPIDPEDKKR
YDREFLLGFRYIGASMNKPEGLPLICDVVLDKANKTPMRPAEPGRNMMNAGPDFTPAFMG
NLGRQSSGGGGGGPRGPGRDHMGPPGPRRSQQGQRKEPRKIIISSSLGGDVELNKAEKAW
KPAVKMAGSRGTGPEEEESDDPEQAKTQELFKRVRSILNKLTPQMFQQLMKQVTELTIDT
EERLKGVIDLIFEKAISEPNFSVAYANMCRCLMGLKVPTTDKPGVTVNFRKLLLNRCQKE
FEKDQDDDVIFEAKQKEMEAAKEEEKAGLKAELEEAKDKARRRSLGNIKFIGELFKLKML
TEAIMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFAQMDKIIKEKKT
SSRIRFMLQDVIDLRRSGWVPRRGEQGPKTIDQIHKDAEREEQMQLVKVQQQLMSRNDSG
GGGGGGGGGGGRGGGGGGGGGGRDGRGGDRDRGGRDQGGRGGQHGGQGARGSQPQDEGWN
TVPISTKNRPIDTSRLSKITKPGALDFNNQLLAPQLGGKGMWGSWGKGSSGGTTGAKPAA
GAEPAETGRPATGNRFSALQQSAPPASSSDADRRVPQRSSSSRDRGGDRDRFDRFERRDS
SRDARPPVTKRSFSRETEERRSDSRTPTEPPVRRVASMSDDRNRGSRDRGGSGSRDRAPS
KEAVVKRETGPTLPPAAPAKPAMTEEELDKKSSAIIEEYLHLNDMKEALQCVGELNSAPL
LFVFVRNGLEDTLERSAIARERMGLLLHQLLKAGTLPTTQYYKGLQEILEVAEDMAIDIP
HIWQYLAELITPMLHDGGIPMGQLFREISKPLVPLGKAGLLLVQILNLLCKGMTHKKVGG
LWTEAGLNWRDFLPEDEDVNKFVTEQKMEFTLGEESDETNQKKPMSGEELSKHLDRLIQD
RANNQRIRDWVEANLDEQQAAANQFVRALMTSICQSAVICENPYKVDVEQITQRAKLLQR
YLSDEHRELQALYALQALMVHMEQPANLLRMFFDALYDEDVIKEEAFYRWESSKDPAEQT
GKGVALKSVTAFFTWLREAEEESDKD
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccctgctcttgtcagtccatttacaagataggctggcaagtcagcgccaccct
aatgcagaaccaagtgaaatgaacaaaccaccgcagcctataacgggacccacctctgtc
ccacacccctccccctcccctggactgacacaggctgcctatgccccaggtcagccccct
tctctcgtcttcgccaccccaccacctcaacaaatgaactcttcaccgcaaccgcgacag
ttcgccgcagggcctcgtgctttacaccaacagggcggatacagggcactgcagccctac
tatgccaacagggccaccatgtccaccagtgccccccgggtccagaccagcagcgggcct
cgtccggtgggtcccacccacgtctaccagcccagctcccagatgatgatgatccctggg
cagcagctgtcctttgctggctcccctcagggctacttcatcccccctggacagtaccgg
gctccctacatgccacccagtccacaataccccgtgaccagtggcacggcaggcttctac
ccaggaaccagcccggctgaataccccacctatgagccctctctggctgcgagggaaagg
cgggggggtggggggagagggggcgggcgagagaacgggcgtctctctctccacggcgct
cctctcacctcccagcgctaccccgcaggtgcctactacccagcccagccccagtacagc
cacacaccccctgtccaaacggcgcctgtcatgataagccccgcccagccccagcaacag
gccctgccccctcagccgccgccgagccaacaactggcacccaagagggagcgcatagcg
atcagaatacgagaccccaaccaggggggccgcgatatcacagaggagatcatgtccggg
ggaagggccacctccacccccccatcacagtcctccactacagagggagaaggtccttcc
cagaccaacggagaagttacaaagcccgtcaccatgatgacgagaacagatgacaacacg
gaacctgcagaaacaatggccgccatgaccccgcctcctgcgttggtgaccccagagcct
gccaccgccaccgtctcaactgaggccaagcaggaaaaagatagcctggcagccccacct
accgaacaggtcgccagccaatcggctgtccccacggctgcggaggaggccattccgcca
gaggaagaccaggcccctcccccatccccctcgcccccggcagctcctacctcccctgcc
cctgcagaggtgcagacaccaccccccagcaccaccatcgctcaggtcagtgacacggtg
gatgccggtgtgaccctggcgggaaaggcagtgactcctgaggctcctcccattgaggaa
gagccttcggccgccctagcagccgtcgagaagcctcctgctctggtagcggagaaagag
gaggcagagaataaaaaggaagaagaagtagtggtggaggaggagattgtagagaaggta
aagcaggagcctgtgcttaccaccaagccagaggtagtggcgcctgttacggtggcggtc
gctaaagaacacactaagcccgctccacgacctttgacccccgttgccacagcaacgatc
aaacactctgccccggctgtgaagccggtggtgtctgtggaagctcccactaaaactgag
agcgtggtcgagccgacagcgccgaaacaggaatctgctgctgctgtgcccgtgtctgcc
cctgttcctgccgtcactccctctgtcccggaggcagagcccgccatggcccagaagagc
gaggtgcagacgcccctgtccaacggcctcccccaggagtaccccgacgaggtagacgcc
cccgtgcccgcacaagagcgaactgcaatgcccaacaccgagcctgccgttcccacacct
caggaaactgctatccttgcagatgctgctgtggcagaggagggggagaaagaggaagat
gcagccacggtgcccttggccagtagcccttcagaggacacgtctatgcaagctgctgtg
tctgtgccaaagaagaagaggaacatgaaggagctgaacaagaaggaggccataggagac
atgctggatgccttcaaagaggagaaggaggcggcggctgcccccgagcccttgtccact
ctggcggagcccagccctgtggcccctccccctttggtgcccgccgacgcgccagacgag
acgtgggaggagaaggaggacaagcagaatgccgacacgcccccgctcaaaccaggcgac
ctcaagtaccagtacaaaggagagcaatggaagcctatcgacccggaggataagaagagg
tacgacagggagttcctgctgggcttccggtacattggtgccagcatgaacaagcccgag
ggcctgcctcttatctgtgatgtggtgttggataaggccaataagacccccatgcgccca
gcggagccgggtcgcaacatgatgaacgccgggccagacttcacccccgccttcatgggt
aacctgggcagacagtcctccggaggtgggggagggggaccacggggccctggaagggac
catatgggacccccaggaccccggcgctcccagcagggccagcgtaaggagccccgcaag
atcatcatctcctcatcgctaggcggcgacgtggagctcaacaaggcagagaaagcctgg
aagcccgcggtgaagatggcggggagccgcgggaccggtcccgaggaggaggagagcgac
gaccccgagcaggccaagacccaggagctgttcaagagggtccgctccatcctcaacaag
ctgacccctcagatgttccagcaactgatgaaacaggtcaccgagctgaccatcgacacg
gaggagcggctgaagggagtgatcgacctcatctttgagaaggccatctccgagcccaac
ttctccgtggcctacgccaacatgtgccgctgccttatggggttgaaagtgcccaccaca
gacaagccgggagtgactgtgaacttccgtaagctgctgctgaaccgctgtcagaaggag
tttgagaaggaccaggacgacgacgtgatctttgaggccaaacagaaggagatggaggcc
gcaaaagaggaggagaaagccggtctgaaggcggagctggaggaggcgaaggacaaggcg
cgccggcggtcgctgggcaacatcaagttcatcggcgagctgttcaagctgaagatgctg
acggaggccatcatgcacgactgcatcgtcaagctgctgaagaaccacgacgaggaatcg
ctggagtgcctctgtagactgctgtccaccatcggcaaggacctggactttgagaaggcc
aagccccgtatggaccagtactttgcccagatggacaagatcatcaaggagaagaagacc
tcgtccaggatccgcttcatgctgcaggacgtcatcgacctcagacggagtggctgggta
ccccggcgaggggagcaaggcccgaagaccatagaccagatccacaaggacgctgagcga
gaggagcaaatgcagctggtcaaggtccaacagcagcttatgtcaaggaatgacagtggt
ggtggaggaggaggaggaggaggtggtggtggaagaggaggaggaggaggtggtggtggt
ggaggaagagacggcagggggggagaccgagacagaggaggaagggatcaggggggccgt
gggggccagcacggcggccagggggctaggggcagccagccccaggacgaaggctggaac
acagtgcccatctccaccaagaacagacccatcgataccagccggctcagcaagatcacc
aagcctggtgctctggacttcaacaaccagctccttgcgccccagctcgggggtaagggc
atgtggggcagctggggcaagggcagcagtggaggcaccacaggagccaagcctgccgcc
ggagctgaaccggcggagactggccgtccggccactggcaaccgtttctctgccttgcag
cagtctgctccaccagcgtcgtcctcggacgctgaccgcagggtaccccagaggtccagc
tccagtcgtgaccgcggcggggaccgggacaggttcgaccgcttcgagcggcgcgacagt
agtcgcgacgcccgcccgcctgtcaccaagcgcagcttcagccgcgagacagaggagcgt
aggagcgatagtcgcacccctacggaaccccccgtccggcgcgtagccagcatgtctgac
gaccggaacagaggcagccgtgaccggggaggcagtggtagccgggacagggctcctagc
aaggaggctgttgtgaagcgtgagacaggccccacccttccccccgctgctccggccaaa
ccggccatgaccgaggaggagctggacaagaagtccagcgccatcatcgaggagtacctc
catctcaacgacatgaaggaggcgctgcagtgtgtaggggagctgaacagcgccccgctg
ctctttgtgtttgtgcggaacggcctggaggacactctggagcgcagcgccatcgccagg
gaacggatgggcctgctgctgcaccaactcctcaaggccggcaccctgcccacaacacag
tactacaaggggctccaggagatcctggaggtggctgaggatatggccatagacatcccc
cacatctggcaatacctggctgagctcatcacccccatgctccatgacggaggcatcccc
atgggacagctcttcagggagatctccaagcctctggttcccctgggtaaggctggtctg
ctgctggtgcagattctcaacttactctgcaaaggaatgacccataagaaggtgggtggt
ctgtggacggaagcagggctcaactggagagacttcctgccagaggatgaggacgtcaat
aagtttgtgactgaacagaaaatggagtttaccctgggggaggagtcggatgagaccaat
cagaagaagcccatgagcggggaggagcttagcaaacatctggacagactgatccaggac
agggctaacaaccagcgcatcagagactgggtcgaggccaacctggacgaacagcaggcg
gctgccaaccagtttgtgcgtgctctgatgacctccatttgccagtcagctgttatatgt
gagaacccgtacaaggtggacgtggagcagattacccagagggccaagctgctgcagcgg
tacctgagtgacgagcatagggagctgcaggccctttacgccctccaggccctcatggtg
cacatggagcaaccggccaatctgctgcggatgttctttgacgcgctgtacgacgaggac
gtgatcaaagaggaggccttctacaggtgggagtccagcaaagaccccgcagagcagacc
ggcaagggcgtggccctaaagtcggtcaccgccttcttcacctggctccgcgaggccgaa
gaggagtccgacaaggactaa
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