Oncorhynchus tshawytscha (Chinook salmon): 112260413
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Entry
112260413 CDS
T05605
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00061
Fatty acid biosynthesis
otw00071
Fatty acid degradation
otw01100
Metabolic pathways
otw01212
Fatty acid metabolism
otw03320
PPAR signaling pathway
otw04146
Peroxisome
otw04216
Ferroptosis
otw04920
Adipocytokine signaling pathway
Module
otw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112260413
00071 Fatty acid degradation
112260413
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112260413
09143 Cell growth and death
04216 Ferroptosis
112260413
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112260413
03320 PPAR signaling pathway
112260413
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
otw01004
]
112260413
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112260413
Enzymes [BR:
otw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112260413
Lipid biosynthesis proteins [BR:
otw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112260413
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of breast milk
112260413
Exosomal proteins of breast cancer cells
112260413
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112260413
NCBI-ProteinID:
XP_024291254
UniProt:
A0A8C8IYT7
LinkDB
All DBs
Position
LG10:51645184..51671113
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AA seq
715 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVYSVITFLPWYLLSGAGANLDRARRVKARSVSGRPAGPYR
ATNHEDGSQQKLVSSLHPGVDTLDKVMEHGAARFPERNCLGTREVLSEEDELQPNGKVFK
KVILGEYQWMSYEETYQAAVCFGSGLAALGQRPQCNIAIFCETRAEWMIAAQACFIYNFP
LVTLYSTLGGAAIAHGLNETEITHIITSKDLLHSRLKDILLEVPRLQHIIVVDSKPTSWP
GFPRGIMVHNMDAVQELGSRPDNMAVARRRPVPSDIAVIMYTSGSTGIPKGVMISHSNII
AGVTGMAERIPDLDETDTYIGYLPLAHVLELSAEMVCISHGCCIGYSSPQTLADQSTKIK
KGSKGDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSSVQRTLFVLAYNYKMEQITKGYK
TPLCDSLVFRKVRSLLGGHMRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGT
ISEMWDYSTGRVGAPLICSEITLKDWEEGGYYSTDKPHPRGEIVIGGPNVTMGYYKNEVK
NREDFFVDSNGQRWFCTGDIGEFLPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKNCP
FVDNICAYANSDQSYVIGFVVPNQKQLMALAEQRGLRGSWEEICNNPDMERDVLHIITEA
ALSAKLERFEIPRKIRLSAEPWTPETGLVTDAFKLKRKELKSHYQEDIERMYGGK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaagaggacatgaacccactgctgctgcaggtcttccgctcggttgtctgg
gtctactctgtcatcaccttcctgccctggtacctgctctcgggcgcaggagccaaccta
gaccgggcgcggcgggtcaaggcacggtcagtgagcggtcgcccggcgggcccttaccgg
gcgaccaaccatgaggatggtagccagcagaagctggtgtcttccttgcacccaggagtg
gacaccctggacaaggtgatggagcatggagcggccaggttcccagagaggaactgcctg
ggcacgagagaggtgctgagcgaggaggacgagctccaacccaacgggaaggtcttcaag
aaggtgatcctgggggagtatcagtggatgtcgtatgaggagacctaccaggcagcagtg
tgttttggcagtgggctggccgcgctgggccagaggcctcagtgtaacatcgccatcttc
tgtgagaccagggccgagtggatgatagcagcacaggcctgcttcatatacaacttccca
ttggtgacgttgtactctactctgggcggagcggccattgcccacggtttgaacgagact
gagatcacccacatcatcaccagcaaagacctgctacacagccgtctcaaggacattctg
ttggaggtgcctcggctgcagcacatcatcgtggtggacagtaagccaaccagttggcct
ggcttcccccgcggcatcatggtccacaacatggacgccgtgcaagagctgggctccaga
cccgacaacatggcggtggcgcgccggcggcccgtgccctctgacatcgctgtcatcatg
tacaccagcggctccacgggcatccccaagggcgtcatgatctcccatagcaacatcatc
gcgggcgtcacaggcatggcagagcgcatcccagacctggatgagacagacacctacatt
gggtacctgccactggcccatgttctggagctgagtgcagagatggtgtgtatctctcac
ggctgttgcattggatactcctccccacagacgctagcagaccagtcgactaagattaag
aagggcagtaaaggagacaccagtgttctaaaacctacactcatggctgctgtaccggag
atcatggatcggatctataagaatgtgatgaccaaggtggaggagatgagcagtgtgcag
agaaccctctttgtgttggcctacaactacaagatggaacagatcaccaagggctacaag
accccgctctgtgacagtctggtgtttaggaaagtgcgctcgttgttggggggtcacatg
agggtgctgttgtcaggcggagcgcccctctccgctgccacccagcgcttcatgaacatc
tgcctctgctgtcccgtgggccagggctacggcctcaccgagacctgcggagctggcacc
atcagcgagatgtgggactacagcacaggccgggtcggcgctcctctgatctgctccgag
atcaccctcaaggactgggaggagggcggttactacagcacagacaagccacacccgaga
ggggagattgtaatcggcgggcccaacgtgactatgggttactacaagaacgaggtgaag
aaccgcgaggacttcttcgtggacagcaacggccagcgctggttctgtacaggagacatt
ggggagtttctcccagacgggtgcctcaagattattgatcgtaagaaggatctggtgaag
ctccaggctggggagtatgtgtctctggggaaggtggaagccatgctgaagaactgccct
tttgtagacaacatctgcgcctacgcaaacagtgaccagtcgtacgtgattggcttcgtg
gtgcccaatcagaagcagttaatggcgctggcggagcagcgagggttacggggcagctgg
gaggagatctgtaacaaccctgacatggagagagacgttctccacatcatcacagaggcc
gctctgtcagccaaactggagcgctttgagattccgaggaagatccgtctgagtgcagag
ccttggacaccggagactggcctggtgactgacgcattcaaactcaaacgcaaggagctc
aaatcacactatcaggaagacatcgagagaatgtacggtggcaagtaa
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