Oncorhynchus tshawytscha (Chinook salmon): 112260517
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Entry
112260517 CDS
T05605
Name
(RefSeq) cullin-1
KO
K03347
cullin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04110
Cell cycle
otw04114
Oocyte meiosis
otw04120
Ubiquitin mediated proteolysis
otw04141
Protein processing in endoplasmic reticulum
otw04310
Wnt signaling pathway
otw04340
Hedgehog signaling pathway
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112260517
04120 Ubiquitin mediated proteolysis
112260517
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112260517
04340 Hedgehog signaling pathway
112260517
04350 TGF-beta signaling pathway
112260517
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112260517
04114 Oocyte meiosis
112260517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112260517
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
112260517
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
CUL8_C
Motif
Other DBs
NCBI-GeneID:
112260517
NCBI-ProteinID:
XP_042184730
UniProt:
A0A8C8J6I0
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Position
LG10:58357670..58371011
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AA seq
777 aa
AA seq
DB search
MSSNRSQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSN
QARGAGPPPSKPSKKAPTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLSVYKEYFETQFLAD
TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIYNQGLAAIEKCGEAA
LNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMVQSSSKSP
ELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS
ASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQV
LSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKNRY
TLQASTFQMAILLQYNAEDVYTVQQLADSTQIKIDILVQVLQILLKSKLLVLEDENANVD
EVEFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIM
KMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaacagaagccagaaccctcatgggctcaagcagattggcctggaccagatc
tgggatgacctgcgagcaggaatacagcaggtgtacaccagacagagcatggccaaatca
cgatatatggaactgtacacacatgtttataactactgtaccagtgtgcatcagtccaat
caggcccgtggggcagggccccctccatccaagccctccaaaaaggcccccaccccagga
ggggcccagtttgtgggcctggagctctacaagagactcaaggagttcctcaagaactac
ctgaccaacctgctcaaggacggagaagacctgatggatgagagtgtattaaagttctac
acacagcagtgggaagactacagattctccagcaaagtgctgaatggtatctgtgcctac
ctcaaccggcactgggtccgccgcgagtgtgacgaggggcgcaaagggatatatgaaatc
tactccctcgcgttggtgacatggagagaatgccttttcagacctttgaataaacaagtc
acaaatgctgtattgaagctcattgagaaggaacgtaacggagagaccatcaacactagg
cttatcagtggagtcgtccagtcctatgttgagttgggtctcaatgaggatgatgccttt
gccaaaggccccacgttgtcagtctacaaagagtacttcgagactcagttcttggcggac
acagagcgcttttacacacgagagagcacagagttcctgcaacaaaatccagttactgaa
tacatgaaaaaggctgaggcgcgtctgttggaggagcagcggagggtgcaggtgtacctc
catgagagcacgcaggacgagctggcccgcaagtgtgagcaggtgctcatcgagaagcac
ctggagatcttccacacagagttccagaaccttctggacgctgacaaaaatgaagacctt
gggcggatgtacaatttggtgtcccggatcactgatggattgggagagctgaagaaactc
ctggagacgcacatatacaaccagggccttgctgctatagagaagtgtggagaagcagct
ctcaatgatcccaaaatgtatgtccagaccatcttagacgtccacaagaagtataatgct
ttagtaatgtcagcgttcaacaacgatgctggttttgttgctgctctggacaaggcctgt
ggacgcttcataaacaacaatgctgtgaccaagatggtgcagtcatccagcaaatcccca
gagctactggctagatactgtgactctctgctgaagaagagctcaaagaacccagaggag
gcagagctagaagacacactaaaccaagtgatggtggtctttaagtacatagaggacaaa
gatgtgttccagaagttctatgccaagatgctggctaagcggttagtccatcagaacagc
gccagtgatgatgctgaagccagtatgatctccaaactaaagcaagcgtgcggcttcgag
tacacctccaaactccaacggatgttccaggacatcggagtcagcaaagacctaaatgaa
caatttaaaaagcacctcaccaactctgagcctttggacttggacttcagcatccaggtc
ctcagttctggttcctggcccttccagcagtcctgtacatttgccttgccctctgagctg
gagaggagttaccaaaggttcactgccttctacgccagcagacacagcgggcgcaagctg
acctggctctaccacctgtccaaaggagagctggtcaccaactgctttaagaacagatac
actctgcaggcttctaccttccagatggccatcctattgcagtacaatgctgaggacgtc
tacacagtgcagcagctcgcagacagcacacagatcaagatagacattttggtgcaggtg
ttgcaaatcttgttgaagtctaaattgctggtcctggaggatgagaatgcaaatgtggat
gaagtagagttcaaaccagacaccttaataaaactcttcctgggatacaaaaacaaaaaa
cttcgggtgaacattaacgtgccaatgaagacagagcagaagcaggagcaggaaaccact
cacaagaacatagaggaggacaggaaactgttaatacaggctgccattgtgagaatcatg
aagatgcgcaaagtgctaaaacatcagcaactcctggcagaggtgctgaatcagctgtca
tccaggtttaaaccaagagttcccgtcatcaagaaatgtatcgacatcctgatcgagaag
gagtacctggagcgtgtcgacggagagaaagacacttacagctacttggcttaa
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