Oncorhynchus tshawytscha (Chinook salmon): 112260545
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Entry
112260545 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 21 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112260545
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
Others
112260545
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112260545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PH_9
PDZ_6
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112260545
NCBI-ProteinID:
XP_042184737
LinkDB
All DBs
Position
LG10:59285725..59353999
Genome browser
AA seq
1869 aa
AA seq
DB search
MMASHWKGPCDEEDEGLTRSSLCENNVPEWRVQGDSPAGLFNLQGEEEPFSWPGPKTLRL
RRTSQGFGFTLRHFIVYPPESAVHPYPFPEEEHGRRGRQRNRLEPMDTIFVKQVKEGGPA
NEAGLCTGDRIVKVNGASIIGKTYSQVIALIQNSDAFLELCVMPKDEDILQLAYSQDAYL
RSRSTYSGNARHIPEPPPICYPRVDCKPPGMAQATETPSPVGVGVQGACRGATSPDTGYR
MEIPVPPSPPPPAHPYPKSQTVACMRNDSVRTVVVPPELGRIGPAHRIDYSLVGSPDPGL
IRVRPGSVSHYPLPRKTDIYPSGASLLNYSAPLHQYSPNPVSHQNIDWRTYQTYREYIDN
KSIHAYGSQTIQERLECLRAASQNTFNSSHHIPRSGWGPNPKGLRRRSTSHDRAYHGPPP
PFHHMPPRSSSQDRMSMAERGVHTRNWPPRSVSQDGLTHKARARSSDCDYVDSVELGRPM
VDRRGYASRLDQGTRPSRQSLSKQAVHHRPPAGYGRDSLRGTPMPNPTLYAKGPEQLQHQ
PHGVPNMTQDRPSHLGKIISLEPSPTDQRAGVKDVSQSRGRAETMQPAGEVPGREVAAVV
GHRSSSLSASHQRPQRLGILKTSHHHPPHTEPQAQVNGRGPSASELGVVLREKPPGSVKN
PSPLRHPSYILAVNEEDGSEPAADSVCWLPNDARREMHMRRLSKKQEKDQTSCSSSNLEE
SLDSIPFIDEPASPSVDHEATSIPASAVISGVPAVLPLNPSSSPCPFIRRQMSHDQESLR
NAILESDASTKQERSKSCDEGLDNYREEGRGRSNSKHMPGLRGLRKALDGHKSSDDSGSR
RDSSSDIFSDSSKEGWLNFRQLNTEKSKRVSGGSRSWKQMYAVLRGHALTLYKDKKDGIS
HASSHSQSDDDPQPISIKACLIDISYSDTKRKNVLRLTTSHCGYLFQAEGRDDMLSWIRV
IQENSNLDDESAGITSQDLISRKIREYNTMMSAPSTKTEPSPKTSRQSLSIRHTLLGGKG
EGKSPHSPKTGERDDSSPPRDKAAWRRGIPGIMRKPFEKKATAGVTFGVRLDDCPSAQTN
RFVPLIVEVCCKLVEERGLEYTGIYRVPGNNAAISSMQEELDNKGLMSDIDIQEDKWRDL
NVISSLLKSFFRKLPEPLFTNEKYADFIEANRTEDSVERLKELKRLILELPEHHYETLKF
LSGHLKLVSENCEKNKMEPRNLAIVFGPTLVRTSEDNMTNMVNHMPDQCKIVENLIQQFD
WFFTEEGDDDPVTSVEQESTVQSQPVPNIDHLLSNIGRTTTTTSAVEVSDSACSDSSKSK
QGLWGSGKDQCSREMLRSSFFVSRKRKKPKDKAQPSSSDDDLDAVFAKKEQPEQQSMSHQ
DLHPTWSPDSQTDVEREASERGEQPGDRVQTNGKESRSDGLMSQPSPSPSPKHTPSPCLR
TSSTRSPYTSQSPRLGHRRQVAHQSSLSDPPSNYDEVSDLGTMNSTSSQASVTGPRVRHG
RTGALRPETGASGLGAEVSSITSDYSTTSSMTFLTGAELSTLCPEVHSVAESRGGDDADD
ERSELISEGRPMETDSESDLSVFIGSVKETRPGKDFCQSDVPDAPRPLPSHRLIECDTLS
RKKSAARQKTDSDSSLDGGQSDKDSNRLSRVLGVVKGRSTSSLSSSSRSESEKGIEPAWR
LKITDRLKFRLRTSVDDMFGVGTQQSRSPEGRRDKKKNIRRRHTMGGQRDFAELSVMGDW
QGGMGGGSRAELSAVDRLKPKCSSQDFSIREWIARERHRTSNPEVSLDFSEHQGALLLLR
NPDPQNPNHQVQEAPSSSLSDPLSPRPTPAELLNGDTGPQSKSLNLSATAHPHKLSGAQV
VQSRFYQYL
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtcacattggaaaggtccatgcgatgaagaggacgagggactgaccagatcc
tctttgtgcgagaataacgtgccagagtggcgtgtgcagggggattcccctgcaggcctg
ttcaacctgcagggagaggaggaacccttctcgtggccagggcctaagacactccgtctt
cgacgcacctctcaaggctttggcttcactctgcgccacttcattgtctacccacccgag
tcagccgtgcacccgtaccccttcccggaggaagagcatggccgcagagggagacaacgg
aacaggctggagccaatggacaccatctttgtgaagcaagtgaaggagggaggtcctgcc
aacgaagctggactctgcacaggagacaggatagtaaaggtgaatggagcgagtatcatt
gggaaaacctactctcaggtcatagccttgatccaaaacagtgatgcctttcttgaactc
tgtgttatgccaaaagatgaagacatactgcagctggcctattcccaggatgcgtacctc
cgaagccgcagtacctacagtggaaacgcccgtcacatccccgagccaccccccatatgt
taccctcgtgtagactgtaagcccccagggatggcccaggctacagagaccccctcccca
gttggagtgggggtacagggagcatgccggggggcaacatcaccagacacggggtaccgc
atggagattcccgtgcccccctcccctcctcctcctgcacacccgtaccccaaatcccag
accgtggcgtgcatgcgcaacgacagcgtgaggactgtggtagttcctccagagctgggc
cgtataggaccagcacacagaatagactatagcctggtagggtcccctgaccctggcctc
atcagagtgcgtcctgggtctgtgtcccactaccccctgccccggaaaacagacatctac
ccctctggggcgagcctcctcaattacagtgccccgctacaccagtactcccccaatcct
gtctctcaccaaaacatagactggcggacgtaccagacctacagggagtacatcgataac
aagagtatacacgcctatggcagccagaccatccaggagagactagaatgcctgcgagcc
gccagccagaacaccttcaactcctcccaccacatcccccggagtggctggggccccaac
cctaagggtctccggcgcaggagcacctcccacgaccgcgcctaccatggacctccgccc
cccttccaccacatgcccccccgcagctcttcccaggaccgtatgagtatggcggagcgg
ggggtccataccaggaactggcctcctcgtagtgtttcccaggatgggttaacacacaag
gcccgggctcgctcctctgactgtgactatgtggactctgtggagctgggccggcccatg
gtggatagacggggctacgctagcaggctggaccagggtacacgccccagcaggcagagc
ctctccaaacaggctgtccatcaccgaccccctgcagggtacggtagggacagcctccgg
ggaacgccaatgcccaaccctaccctctatgctaaaggaccagagcagctccagcaccag
cctcatggcgttcctaatatgacccaagacagaccctctcacctggggaagattatcagc
ttggagccctccccaaccgaccaaagagctggggtcaaagatgtgagccagagcaggggg
cgggcggagaccatgcagccggcaggggaggtgccagggagagaggtggcagcggtggtg
ggccataggtcctcgtccttatccgcctcccatcagagaccacagaggcttgggattctc
aaaacctcccaccaccacccacctcacacagagccccaggcccaggtgaacggtcgcggc
ccttcggcctcagaattgggcgtagtcctcagggaaaagcctcctgggtcggtgaagaac
cccagccccctgcgccacccttcctacatcctggcggtgaacgaggaggacggttcagag
ccagcagcggactcggtgtgctggctgcccaacgatgcgaggcgggagatgcacatgcgg
cggctgagcaagaagcaggagaaggaccagacctcatgctcctccagcaacctggaagag
tccctcgactcaatcccctttatcgacgagccggctagccctagtgttgaccatgaggcc
acgtccattcctgcttccgccgtgatatctggcgttccagccgtactccccctgaaccca
agctcctccccgtgccctttcattcgccgacagatgtcacatgaccaagagtctctcaga
aatgctatcctggagtctgatgcttcgaccaaacaagagcggtccaaatcctgtgacgag
ggtctggataactacagagaggaaggcagaggccggtccaacagtaaacacatgcctgga
ctgagaggcctaagaaaggctctggatggacacaagtcgtctgatgactctggttccaga
agggactcctcttcagatatcttcagtgactcttctaaagaaggctggctcaacttcagg
cagctcaacactgagaagagcaagcgtgtgagcgggggttcgaggtcgtggaagcagatg
tacgctgtgctgcgaggccacgccctcacgctctacaaggacaagaaggacggcatctct
cacgcctcctcccactcccagtccgacgacgacccacagccaatcagcatcaaggcctgc
ctgattgacatctcctacagcgacacaaaacgcaagaacgtgctgcggctgaccacgtcg
cactgcgggtacctgttccaggcggagggcagggatgacatgctgtcctggatcagagtc
atccaggagaatagtaatctggatgatgagagtgctggtataaccagccaggacctgatc
agcagaaagatcagagagtacaacaccatgatgagtgcccccagcaccaagactgagcct
tcccccaaaacctcccggcagtccctcagtatcagacacaccctcctgggggggaaggga
gaaggcaagagcccacactcacccaaaacaggagagagggatgactccagtcctccacgg
gataaggctgcctggaggaggggcatccccggcatcatgaggaagccctttgagaagaag
gccacagctggggtcacctttggggtgcgcctcgatgactgcccatctgcacagaccaac
cggtttgttcccctcatcgtggaggtgtgctgtaagctggtagaggagagggggttggag
tacactgggatctacagagtaccagggaacaatgctgccatctccagcatgcaggaggag
ctggacaataaaggactgatgagtgacatcgacatccaagaagataaatggagggaccta
aatgtgatcagtagtttactgaaatccttcttccggaaacttccagaacccctttttaca
aatgaaaaatatgcagattttattgaagccaatcgaacagaagactcagtggagaggttg
aaagagctcaagaggctgatccttgaattgcctgagcatcactatgaaaccctcaaattt
ctctctggacacctcaagttggtctctgaaaactgtgagaaaaataagatggagcctcgt
aacctggccatcgtgtttggtccgactctggtcaggacctcggaggacaacatgaccaat
atggtcaaccacatgccagaccagtgcaagatagtggagaacctcattcagcagtttgac
tggttcttcactgaggagggggacgatgaccctgttacctcagtggaacaggagagtaca
gtgcagtctcagcctgtgccaaacatcgaccacctgctgtccaacatcggccggaccaca
acaaccacctccgctgtggaagtctcagattcagcatgcagtgactcctccaaatcaaag
cagggcttgtggggctctgggaaggaccagtgtagcagggagatgcttcgctcctccttc
tttgtcagccgcaagcgtaagaagcccaaggacaaggctcagcccagcagctctgacgac
gacctggacgccgtgtttgctaagaaggagcagccagaacaacagagcatgagccaccag
gacctccacccaacctggtccccagacagccagacggatgtggagagggaggccagcgag
agaggggaacagccaggggacagggtccaaaccaacgggaaagagtcccgttcagacggc
ctcatgtctcagccctctccatccccctctcccaaacacaccccatccccctgcctccgt
acctcctccacacgctcgccctacacctcccagtcccctcgcctcggccaccgcaggcag
gtggcccaccagtcatctctgtcggacccaccctccaactacgatgaggtctcagacctg
ggcaccatgaacagcaccagctctcaggcatctgtgacaggacccagggtgaggcatggc
aggacaggggccctgagaccagaaactggagccagtggcctgggggccgaggtcagctcc
atcacctcagattactccaccacctcctccatgaccttcctcacgggggccgagctgagc
acgctctgtccagaggtacactcggtggccgagagcaggggaggagatgacgctgatgat
gagcgtagtgagctgattagtgagggccggcccatggagacggacagcgagagcgaccta
tcggtgtttattgggagcgtgaaggagacccggccggggaaagatttctgccaatcagac
gtgccggatgcgcccaggcccctcccctcacacagactcatcgagtgtgatactctctcc
aggaagaaatctgctgcgcgtcagaagactgacagcgattcctctttggacggagggcag
agcgacaaggattccaataggctgtctcgcgttctgggggtggttaaggggcgttccacc
agcagccttagctcctcctcccgcagcgagtcagagaaggggattgagcctgcatggcgt
ctcaagatcacagaccggctgaagttccgtctgcggacgtccgtagacgacatgttcggg
gtgggtacccagcagagccgctctccagagggacgcagggacaagaagaagaacatcaga
cgcagacacaccatgggaggccagagggactttgctgagctgtctgtgatgggggactgg
cagggggggatgggcgggggctcgcgggcagagctgtcggccgtggaccggctgaagccc
aagtgttcttcccaggacttctccatccgggagtggattgcccgggagcgccaccgcacc
tccaaccccgaggtaagcctggacttctctgaacaccagggggcactgctcctcctacgc
aaccccgacccccagaaccccaaccaccaggtccaggaggccccgtcgtcgtccctctca
gaccccctctcaccacgcccaactccagctgagctgctgaacggagacacaggtccccag
agtaaaagcctgaatctgtcggccaccgcacacccacacaaactctctggtgctcaggtg
gtccagtctcgcttctaccagtacctgtga
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