Oncorhynchus tshawytscha (Chinook salmon): 112260561
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Entry
112260561 CDS
T05605
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112260561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112260561
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112260561
GBAF(ncBAF) complex
112260561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
112260561
NCBI-ProteinID:
XP_024291536
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All DBs
Position
LG10:complement(60466301..60479401)
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AA seq
427 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPTGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAKCDSPTPPEVKLEPPTQNMPMGPGGMNQSGVPGPQPPHGHNMP
SEGMVSGGPPAPHMQSQMNGQMPGPNHMPMQGPGPGPNQPPNMPGSGSMNMPPSSHGSMG
GYNHAVPSSQSMPAQGQMNMTQGPMGNYGPRPNMNMQANQGPMMHQQPPSQQYNIPPGGG
GQHYQGQQNPMGMMGQGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASE
ERDPAANQQSPYEKDNERDPAANQQSPYEKDHGNAQYGQQQEAYQQGPPQQQGYPPQQQY
PGQQGYPGPQQGYGPSQGAPGQYPQGYPQGQGQQYGAYRGPQPGPPQAQQQRPYPGYDQG
QYGNYQQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcatagacaacgtggaaagggtgatataacacccactgga
attcagaagttactggatgaaaacaatcagttgattcaatgtataatggacttccagagc
aaaggaaagacagcagaatgttcacagtaccagcagatgctccacagaaatttagtttac
ctggccacaatagcagactccaatcagaacatgcagtctctgctccctgctaagtgtgac
tcccctactcccccagaggtaaagcttgaacctcctactcagaacatgcccatgggccct
ggtgggatgaaccagagcggagtgccgggcccccagcccccccacggacacaacatgccc
tctgagggcatggtcagtggcggacccccagccccacacatgcagagccagatgaacgga
cagatgcctgggcctaatcacatgcccatgcagggccctgggccgggtcccaaccagccc
cccaacatgcccggcagcggctccatgaacatgccccccagcagccatggctctatgggc
ggctacaaccacgctgtgccctcctctcaaagcatgcctgcccaaggtcagatgaacatg
acccaaggacccatgggtaactacggcccccggcccaacatgaacatgcaggctaaccaa
ggccccatgatgcaccagcagcctccctcccagcagtacaacataccccctggaggtggc
gggcagcactaccagggccagcagaaccccatgggcatgatgggccaggggaaccacgtg
atggggcagaggcccatgcccccttacagacccccacagcaaggaccccctcagcagtac
ccagggcaggaagactactatggggaccagtacagtcacgcaggacagggagcctcagaa
gagcgagacccagcagccaaccaacagtccccctatgaaaaagataatgagcgagaccca
gcagccaaccaacagtccccatatgaaaaagatcatggtaatgcccagtatggccagcag
caggaggcctaccagcaaggtcctccccagcagcagggctaccccccacagcagcagtac
cctggacagcagggctaccctggaccgcaacagggctacggtccgtcccagggagcccca
ggccagtacccccagggttacccccagggccaggggcagcagtatggggcctaccggggc
ccccagcccggcccccctcaggcccagcagcaacgcccatacccaggctacgatcagggt
caatatggaaattaccagcaatga
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