Oncorhynchus tshawytscha (Chinook salmon): 112260585
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Entry
112260585 CDS
T05605
Name
(RefSeq) interferon regulatory factor 4 isoform X1
KO
K09445
interferon regulatory factor 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112260585
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
112260585
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Ortholog
Paralog
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Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
112260585
NCBI-ProteinID:
XP_024291582
UniProt:
A0AAZ3QEB3
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Position
LG10:61898768..61908389
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AA seq
496 aa
AA seq
DB search
MVREMNFEGDSGLSVICGNGKLRQWLIDQIDSSIYPGLVWENEEKSIFRIPWKHAGKQDY
NRDEDAALFKAWALFKGKHREGVDKPDPPTWKTRLRCALNKSNDFDELVERSQLDISDPF
KVYRIIPEGAKRGIKMPETTSHMSSVNSYPMHSLYPSLQSQVSGGFMIPQERKEWRDYSH
TLDQPQLHQPPHTELQYSQCHYPQPLSRPWHTGPHTDNGYQFTGSFCSYSSSESHPTAFK
MDHNMSTLSDFRLHVSLFYRESLVKKVTTSSPEGCRITSSSSSSSSPSSLCHEDRLYSGA
ETVQFPSPYPQSQRRGAEKLPNVLERGVLLWMTLDGLYAKRLCQSRVYWEGPLAPYTDKP
NKLEKEQTCKLFDTQQFLTELQGYAHHGRPMPRHQVVLCFGDEYPDPQRQAKMITAQVEP
MFARGMIYFSQQSSSHCLRDYELQGHTEISLPAPGVYQRTLQQSSPLAPGDYQRTLQQSS
PLAQGDYQRTLQHMQE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggttagagagatgaacttcgagggggacagcggcctgtcagtgatttgtggcaatggg
aaacttagacagtggctgatcgatcagattgacagcagcatctatcccggactggtttgg
gagaatgaagagaaaagcattttcaggattccgtggaaacatgcgggcaaacaggattac
aatcgtgacgaggatgctgcactcttcaaggcctgggcattgttcaaagggaaacatagg
gaaggagtggacaaaccagacccccccacatggaagaccagactgcgatgtgctctgaac
aaaagcaatgactttgatgagctggtggagcgaagccaactggacatatccgatcctttc
aaagtctacagaatcataccggagggagctaagagagggatcaagatgccagagacaacg
tcccacatgagctcagtcaacagctaccctatgcactctctatacccatctctacagagc
caggtgtctggcggattcatgattcctcaggagaggaaggagtggagggattacagccac
acactggaccagcctcagcttcaccagccaccccacactgagctgcagtacagccagtgc
cactacccacagccactcagccgaccctggcacaccgggccacacacagataatggttat
cagtttactggctccttctgttcctactcttcctcagagtctcaccccacagcatttaaa
atggaccacaacatgtctaccctttctgacttccgactgcacgtatccctgttctaccgt
gagtctctggtcaagaaggtaaccacctctagtcctgaaggctgccggatcacctcttct
tcctcctcatcttcctctccgtcctccctctgccacgaggacaggctgtacagtggtgca
gagacggtgcagttcccctccccttacccccagtctcagaggagaggggcagagaagcta
cccaacgtcctggagaggggcgtgctcctgtggatgacgttagatgggctctatgccaag
cggctgtgccagagccgagtgtactgggaaggcccgctggcaccctacacggacaaaccc
aataaattggagaaagaacagacctgcaagctgtttgacacccagcagttcctcactgag
ctgcaggggtatgcccaccatggccgtcccatgcccaggcaccaggtggtgctgtgtttc
ggagacgagtacccggacccccagcgccaggccaagatgatcacagcacaggtggagccc
atgtttgccaggggcatgatatacttcagccagcagagcagcagtcactgcctgagggac
tatgagctacagggacacacagagatctcccttccggctccaggagtctaccagaggacc
cttcaacagagctcccctctagctccaggagactaccagaggaccctgcaacagagctcc
cctctagctcaaggagactaccagaggaccctgcaacacatgcaggagtaa
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