Oncorhynchus tshawytscha (Chinook salmon): 112260627
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Entry
112260627 CDS
T05605
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112260627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112260627
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112260627
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
Ank
Ank_4
Ank_5
Roc
Ank_3
PH_6
Motif
Other DBs
NCBI-GeneID:
112260627
NCBI-ProteinID:
XP_024291661
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Position
LG10:63529782..63806664
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AA seq
1378 aa
AA seq
DB search
MLLLSSRATEQAIPGATSKAVTAHQSGGGRTTVYHISVILNGTLGHEEVGVREGLAARHA
SLEQSHPAARSTRARPQALQGKEGHFRLGRWPSLSRTGRVGGRREEAVQEEEEERRKMKT
DRFLQLQQFSGNSAAPAAAHPSQIDWETAAVGVEVKAATAALEQQKTQVETQGQDVSPQT
EVPLPGHHGGVPAGGVLAGGGSPPRAVLRRRPSQDSAAPHNRRAVSMYGAAARQHRGSLS
RQDRQDRPRSVCMLAGPNLNPTLSEPGSHSQQTSRRGATRSLDGPPQQRWTRRAELRAVD
GLKPGVLPQWTVAGAEEKVVPRVRQQTWKPRPVSMTVLELRKKASGSQEGLDSQRGSQGG
GLFGRWRLFGRPAQDKEKEEAPDPGSKLSSKPDAPKKTLSSLRRSLSLRIRRNRPRERVD
ISEVTAEERSRTTSMEQETSLPLRPFSYLTGRTLPPPCERDDDGGRQFIHYHSQGKVKVM
EVPLYPAKLSSSTKPAQEEPSLWQLIARRFRRKEQQQPSNGKCELQPRHQSKETGKYSLG
RIKKPQSVAIETLADCNKVQDSFVNSQEWTLSRSVPELKVGIVGNLSSGKSALVHRYLTG
TYVQEESPEGGRFKKEMVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFSLEDEISFQT
VYNYFLRLSSYRNTAEVPMVLVGTQDAISAANPRVIDDSRARKLSNDLKRSTYYETCSTY
GLNVERVFQDVAQKVVALRKKQQLSIGPCKSLPNSPSHSSVPNASIPSVHINQSANGGGV
FSDYSSSVPSTPSISQREMRIETIAASNTPTPIRKQSKRRSNIFTSRKANSEQAKNTDSK
TDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYVTLCDNGLLTYHPSLHDYMQNVHGKEI
DLLRTTVKVPGKRPPRAVTTIAPTASPKTNGLTKDRSTLQLGVGTAGAPHSNSSTSLQSE
HSVGGGNLVGFGGSKDGMHQRSFSVSSADQWNEAVINTSASTGTANGMAEPLTCSSGVGS
ATSPKQEPPPSPHSNRKRHRRKKSTGITKPDGPSTGNEESEESFEFTIVSLTGQMWYFEA
STFEERELWVTAIESQIFASLQSCESMKNKSRLGSQSDAASIQSIRNVRGNSFCVDCDTA
NPDWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPVELSMVLMAIGNTMANSVWE
GALEGYTKVGADSTREERERWIRAKYEQKLFLMDVPQSDVPLGQQLLRAVVEDDLRLVVL
LLAHGTKEEVNETYGDGDGRTALHLSCAMANVVITQLLIWYGVDVKSRDARGQTPLSCAR
RAGSQECSDILLQHGCPNDPVSSLTTPNMSRRNPDVNPNPNVNNNNALGELNRSVSIM
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgctactgctgagcagtcgggctacggagcaggctatccccggggccacaagcaaagct
gtaacagcccaccagtcaggaggaggtaggaccacggtgtatcacatctctgtcatcctg
aatggaactttggggcatgaggaggtgggggtgagggagggcctggccgccagacacgcc
tccctggagcagagtcatccggcagccaggagcaccagggcacggccacaggcgctgcag
gggaaggagggacacttcaggcttggcaggtggccctccctgagccgtacaggcagagtg
ggggggaggagggaggaggcagtgcaggaggaggaggaggagagaagaaaaatgaagacg
gaccggtttctccaactccaacagttctctggtaactcagcagctccagcagcagcccat
ccttctcagattgactgggagactgcagcggtaggagtagaggtaaaggcagctacagca
gctctagagcaacagaagacccaggtagagacccagggacaggacgtttctccccagact
gaagtgcctctccctgggcatcatggtggtgtccctgccggtggtgttctggccggtggt
ggctctccaccccgggctgtgctccgcaggaggccatcccaggacagtgctgctccacac
aacaggagggcggtgagcatgtatggagccgcagccaggcagcatcgaggctcgctaagc
cgccaggacagacaggacaggcccaggagtgtgtgcatgcttgcaggccccaacctaaac
cctaccctatcagagcccgggtcccactcccaacagacctccaggaggggggctacaagg
tctctggacggtcccccacagcagcgctggaccaggagggcagagctgcgggcggtggac
ggccttaagccaggggtactccctcagtggacggtggcgggggctgaggagaaggtggtc
cccagggtccggcagcagacctggaaaccgagaccggtcagcatgactgtgttggagctg
aggaagaaggcctcggggtctcaggaggggctggacagccaaagaggaagccagggggga
ggtctatttggccgctggaggctgtttggccgaccagctcaggacaaggaaaaggaggaa
gccccagacccaggctccaagctcagcagcaagccagatgccccgaagaagaccctgagc
tccttacgccggagcctcagtctgcggatcaggaggaaccggccgcgggagagagtggac
atttctgaggtgacagcagaggaacgctcacgcactacaagtatggagcaggagacatct
ctccccttgcggcccttctcctatctgactgggaggaccctgccacctccttgcgagagg
gacgatgatggagggaggcagttcattcattaccacagccagggcaaggttaaggtgatg
gaggtgcccctctatccagccaaactgtcctcctctactaaaccggcccaggaggagccc
agcctatggcagctcatagccagacgctttaggaggaaggagcagcagcaaccgtccaac
ggtaaatgtgaactccagccccgacaccagagcaaagagactggcaaatattccctgggc
aggattaaaaagcctcagtcagttgcaatagagactctggcagactgcaacaaagttcaa
gactctttcgtcaatagccaggagtggacattgagtcgatcagtgccagagctcaaagtg
ggtattgtgggtaatctgtcgagtgggaagtctgccttggtccaccggtacctgacaggc
acatatgtgcaggaggaatctcctgaaggtggtcggttcaagaaggagatggtggttgat
ggacagagctacctgctgctgatcagagatgagggaggccccccggagctgcagtttgca
gcatgggtagacgctgtggtgtttgtcttcagtctggaggatgagatcagtttccagaca
gtctacaactattttctgcgtctgtccagctacaggaacacagcagaagtccccatggtc
ctggttgggacgcaagatgccatcagtgctgccaaccccagagtgatcgatgactcgcgg
gcgaggaagctgtccaatgatctgaagcgctccacctactacgagacctgctccacctat
ggcctcaatgtggaacgagtcttccaggatgttgcccagaaggtggtggctctgaggaaa
aagcagcagctgtctattggtccgtgcaagtccctgcccaactctcccagccactcatca
gtccccaacgcatccatcccctctgtgcatattaaccagtcggcaaacggtgggggtgtg
ttcagcgactactcctcctctgtgccctccactcccagcattagccagagggagatgcgt
atcgagaccattgctgcctccaacacgcccacacccatccgcaagcagtctaagcgccgc
tccaacatcttcacttcacggaaagccaacagtgaacaggcaaagaacactgacagtaaa
acagatagcataggcagtggaagggccatacccatcaaacagggcatccttctgaagaga
agtgggaagtccctgaataaggagtggaagaagaaatacgtcacactgtgtgacaatggc
cttctcacctaccaccccagtttacatgactacatgcagaatgtgcacggtaaagagatt
gacctgttgaggaccacggtcaaggtgccagggaagcgaccacccagagcggtcaccacc
atcgcccccaccgccagccccaagaccaacgggctgaccaaggaccgtagcaccctgcag
ctaggagtgggcactgcaggtgcgccccactctaacagtagtacgtccctccagtcagag
cattcggtcggcgggggaaatctggtgggctttgggggcagtaaagacggcatgcaccaa
cgctccttctctgtgtccagcgctgaccaatggaacgaggctgtcatcaacaccagtgca
agcaccgggaccgccaacgggatggccgagcccctgacctgcagctctggggtgggcagt
gccaccagtcccaagcaggagcctcccccctcgcctcactccaaccgcaagagacacaga
cggaaaaagagcacaggcatcaccaagccagacggaccatctacaggcaacgaagagtcg
gaggagtcgtttgagttcaccattgtgtctctgacgggccagatgtggtacttcgaagcg
tctacatttgaggagagagagctgtgggtcacagccattgagagccagatttttgccagc
ctgcagtcctgtgagagcatgaagaacaagtcccggttaggcagccaaagtgatgcggct
tccattcagtccataaggaacgtgagagggaacagcttctgtgtggactgtgatacagcc
aaccctgactgggccagtctgaacctgggggctctgatctgtatagagtgctcagggatc
cacaggaacctggggacccacctgtcaagggtgaggtctctggacctggatgactggcct
gtggagctcagcatggtgctgatggctataggcaacaccatggccaacagtgtctgggag
ggggccctggaggggtacaccaaggtgggcgctgacagcaccagggaggagagggagcgt
tggatccgggcaaagtatgaacagaagctgttccttatggatgtcccccagtcggacgtg
cccctggggcagcagctgcttcgggctgtggtggaggacgacctgaggctggtggtgctg
ctgctggcccacggcaccaaggaggaggtcaacgagacgtatggggacggggacggacgc
actgccctgcacctgtcctgcgccatggccaatgtggtcatcacccagcttctcatctgg
tatggtgtggatgtgaagagtcgagacgcgcgcggccagacgccgctgtcctgcgcccgc
cgggcaggaagccaggaatgttctgacatcctgctccagcacggctgccccaatgacccc
gtcagcagcctgaccacacccaatatgagccgcagaaaccccgatgttaaccctaaccct
aacgtcaacaataacaacgccctcggtgaactcaaccgcagtgtcagtatcatgtag
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