Oncorhynchus tshawytscha (Chinook salmon): 112260641
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Entry
112260641 CDS
T05605
Symbol
snap47
Name
(RefSeq) synaptosomal-associated protein 47 isoform X1
KO
K18212
synaptosomal-associated protein 47
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112260641 (snap47)
Membrane trafficking [BR:
otw04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-47
112260641 (snap47)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EIN3_DNA-bd
V-SNARE_C
Motif
Other DBs
NCBI-GeneID:
112260641
NCBI-ProteinID:
XP_024291681
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All DBs
Position
LG10:complement(64493056..64499049)
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AA seq
429 aa
AA seq
DB search
MTSPNRDIPIHSWPGSYYINSEKRWEAGTLSLTRTILRFTSDQSKENLVGFRLTRIMEIK
MESSSFIFSTLTVLEQGNLKHWFGSLRPNRLVVYNVLEHFWRERLLSPSTEVQRAEAQPT
KGRELINLVAGAQRRLEDTGYVLHHQGEQFDNVMQGLDKIDSDLGVADKLLSELQSPPWW
PFGKLPWKSQQDANAEHAAREATCKGTATGKHRVITSIPAIVSRGGDSDLKPGCLMVMVS
SLEVRDTNYVLLHRFERDEVDDIRVHNPYEISVRQRFIGKPDICFRLLSAKMPEAMSVLE
IQYKKKVEYTSEYSAFKTTPATTPGDQNQRLIWNAAGLQQYQETEVPRTVPGGELSQVHL
HVLKPEVTQAEVQELRQMLMQLKNLALEAETELERQDEGLDVLTTSMDQATMHIDKHTCR
MKRLLCRCQ
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcccaaaccgagacatccccatccacagctggccaggctcctactacatcaac
agcgagaagcgctgggaggccgggaccctgtccctgacccgcaccatattgcgcttcacc
tcagaccagagcaaagagaacctggttggcttccgcctcaccaggatcatggagatcaag
atggagtcgtccagcttcatcttcagcactctgactgtgttggaacaggggaatctcaag
cactggttcggctcactgaggcccaaccggttggtggtctacaatgtcctggagcatttc
tggagggagaggttgttgtccccctctactgaggtccagagggccgaggcacagcccacc
aaggggagggagctgattaacctggtggcaggggctcaaagacggctagaggacacaggg
tatgtcctccaccaccagggagagcagtttgataacgtcatgcagggcctggacaagatc
gactctgatctgggcgtggcagacaagctactgtctgaactgcagtctcccccttggtgg
ccttttggcaaattaccctggaagagtcagcaggatgccaatgctgagcatgctgccagg
gaggccacttgtaagggaacagcaacaggcaagcacagagtgatcaccagcataccagcc
atcgtttccagaggtggagactcggacctgaagcctggctgcttgatggtgatggtctcc
tctttagaagtccgagacacaaactatgtgctcctccaccgctttgagagggacgaggtg
gatgacatccgggtgcacaacccttatgagatcagtgtgaggcagaggttcatagggaag
ccagacatatgcttcagactcctgtcggctaaaatgccggaggccatgtctgtgctagag
atacagtataagaagaaggtagagtacacgagtgagtactctgcctttaagacgacccca
gccacaaccccaggtgaccagaatcaacgtttaatatggaatgcagcaggcttgcagcag
taccaggagacagaggtcccccgtacagtcccaggaggagagctttcccaggtgcatcta
catgtccttaagccagaggttactcaggctgaggttcaggagctccgacagatgctaatg
cagctgaaaaatcttgctctggaggctgagactgagctggagaggcaagacgagggcctg
gatgttctgaccacctctatggaccaggccaccatgcacatagacaaacacacctgccgc
atgaaaaggctgctttgcaggtgtcagtaa
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