Oncorhynchus tshawytscha (Chinook salmon): 112260688
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Entry
112260688 CDS
T05605
Symbol
si:ch1073-82l19.1
Name
(RefSeq) protein zyg-11 homolog isoform X1
KO
K10350
Zyg-11 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112260688 (si:ch1073-82l19.1)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
112260688 (si:ch1073-82l19.1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_4
LRR_Zer-1
LRR_8
ARM_ARMC5
LRR_EndoS
ARM_UBP24_USP9X-Y
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
112260688
NCBI-ProteinID:
XP_024291749
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Position
LG10:66311823..66347093
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AA seq
757 aa
AA seq
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MAEESCPVALSELCLAQVCLSLDSLCRTQPDGSLRLSWAPLLPQEMADQLLHKMAAQGTL
NDRTVGIFRSCEQLRLRRACVRSSPLSAEAFRLALCPHRLQELDASGVPGGLTGAHILSG
LASNPECRASLQRLTLSRLQLGWTSLEVKEEQVGFSSLQGLRTLNLANTDLTDPFLEDIC
TLPKLEVLDISSTPVTELSALLGCRLTLRSLTAHGLRQLDMSPARVISILSQLHALRHLD
LSDDRFVSAPPSAENDEGGEGDEAVRLLLEGGSGILPALVSLDVSGRKKVTEGAVTAFVE
GRRGLLFLGLLATGAGSCDVLSGNNNLKVAGEANEKQICESLRRYRERECFTREALVHLY
QLTNDMYDQTRPDILKLVLGGMQNYSESLHVQLVASACVFNLTNQDMAVGMPHPLLSAVV
HQVLEAMRSFPSHQQLQKNCLLVLCSDTILQDVPFDRFEAAKLVMNWLSGHVDRTLQRMA
VAVISILVAKLSTEQTTQLGADIFIMKQLLGIVQQKAMAGVVDSTLKFALSALWNLTDET
PTASRHFIQCQGLELYEEVLETYSSESSIQQKVLGLLNNIAEVEELQADMMQEDLLEHVV
TLLQGPQVEVGVSYFAGGILAHLTSRQDAWTLDQGLRQTILEQLHAAILTWALPEREMVS
YRSFRPFFSLLQTSQPAGVQLWAVWAMHLVCTQNGVQYCHMLQVEGAVELLKTLSSDLDT
HSNVRGMAESILGMVECHQTTSNPLRTQTEKGHHGRS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagtcctgtcccgtggccctgtctgagctgtgtctggcccaggtgtgtctc
agcctggactccctctgcaggacgcaaccagatggctccctgaggctcagctgggcccca
ctgctcccacaggaaatggcggatcagctactgcacaagatggctgctcagggcacgcta
aacgacagaacagtcggtatcttccgcagctgtgaacaactccgtctgcgcagagcttgt
gtccgctcctcccccctctctgcagaggccttccgtctggccctctgccctcaccggctg
caggagctggatgcttctggggtccctgggggcctcactggtgcccacatcctctcaggc
ctggcctccaacccggagtgcagagccagcctgcagaggctcacactgagtaggctccag
ttgggctggacgtccctggaggtgaaggaagagcaggtaggcttcagctctctgcagggc
ctgaggacacttaacctggccaacacagacctcacagaccccttcctggaggacatctgt
actctcccaaagctagaggtcctggacatctccagcacccccgtcacggagctgagcgcc
ctgctgggttgccggcttaccctgagatccctgactgcccacgggctgaggcagctggac
atgtcacccgccagagtgatctccatccttagccagctccacgccctcaggcacctggac
ctctctgacgaccgcttcgtctctgcaccaccatccgcagagaatgacgaagggggggag
ggggatgaagcggtgaggctgcttctggaggggggttctgggattctcccagcacttgtg
tctctggatgtgtctggaaggaagaaggtgactgaaggggcggtcactgccttcgtcgag
gggaggagagggcttttgttcctggggcttctggctactggggctggctcctgtgacgtt
ctgtctgggaataataacttaaaggtggctggcgaggccaatgagaagcagatctgtgaa
tctctgaggaggtacagagagagagagtgtttcacacgcgaggccctggtccatctctac
cagctgactaacgacatgtacgaccagaccagaccagacatcctgaagctggtgttggga
gggatgcagaactactcagagtctctccatgtccagctggtggcctcagcctgcgtcttc
aacctgaccaatcaagacatggctgtgggcatgccccaccccctgctcagcgcagttgtg
catcaggtgctggaagccatgagaagcttccccagccaccaacagttacagaagaactgc
ctgctggtgctctgcagtgacaccatccttcaggacgtcccttttgacaggttcgaagca
gccaagctggtgatgaactggctcagtggtcacgtggaccggaccctgcagaggatggct
gtggccgtcatctccatactagtggccaaactgtctacagagcagaccacacagctgggg
gctgatatatttattatgaagcagctgctgggtatagtgcaacagaaagccatggcagga
gtagtggactccactctgaagtttgccctgagtgctctgtggaacctgactgatgagaca
cccactgcctcgcgacacttcatccagtgtcagggcctggagctgtacgaggaggtgctg
gagacctactcttctgaatcttctatacagcagaaagttctaggtcttctgaacaacata
gcagaggtggaagagctgcaggcagacatgatgcaggaggacctgttggagcatgtagtg
accctgctccaggggccccaggtggaggtgggggtcagctactttgctgggggcatcctg
gcccaccttacctccagacaggatgcatggaccctagaccaggggctccgacaaaccatt
ctggaacagctgcatgctgccatactgacctgggccctccctgagcgtgagatggtgtcc
tacaggtcgtttcggccgttcttctccttgcttcagacctctcagcctgctggagtgcag
ctatgggctgtctgggctatgcatctcgtctgcactcagaacggtgtgcagtactgccat
atgctccaggtggagggggcagtggaactcctaaagacattgtcctctgaccttgacacc
cacagcaatgtcagagggatggcagagagcatcctgggtatggtggagtgccaccagacc
accagcaatcccctgagaacacagacagaaaagggacatcatgggaggtcatga
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