Oncorhynchus tshawytscha (Chinook salmon): 112260738
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Entry
112260738 CDS
T05605
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04148
Efferocytosis
otw04218
Cellular senescence
otw04310
Wnt signaling pathway
otw04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112260738 (nfatc4)
04020 Calcium signaling pathway
112260738 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112260738 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
112260738 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
112260738 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112260738 (nfatc4)
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
112260738 (nfatc4)
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
112260738
NCBI-ProteinID:
XP_024291819
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All DBs
Position
LG10:complement(66974468..66981918)
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AA seq
892 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPTRQLRGPSPLCNADQEHTIVGERTESALSLLESSNT
ESHLNTTHVGQPIGIPTPTYSSASQRAGMHSPPPRRALVREFSGTYESLPARSVQVSESH
VLECPSIQITTISPEDDTAPAGSNFWDTGGGWDRERLYLPLMDPFCYREGSTGAGSLSPS
PASSPSSRGWLSPASSCDSLLVEEEELNEVTSHFCLSPSSRPTSPGGKKRRNSPLASPCT
SRRSSYSEDHSCTLEGEDSTSQSQAHNSSFELSIPQKTRKTSLEQVSPRDVEQEQGPAHS
SHCPLPEPLQQRREVASMGMDYLSVPPALGWGRTRASAHSPMFRSNALPPLDWPLPTQFD
QYELRIDVQPRPHHRAHYETEGSRGAVKASPGGHPVVTLTGYTERQPLSLQVFVGTADDR
SIRPHPFYQIHRVTGKMVGTASQESVQAGTKILDIPLNPETNMTALIDCAGILKLRNSDI
ELRKGETDVGRKNTRVRLVFRTHLPLGLPVAPPGRMLALQVTSVPIECSQRSAQELPVVD
SVSVISCSVEGGEELLLGGSNFLPMSRVLFMERGTDGKLQWEEEAHVDRDNSSECLLCVQ
IPAYGDLSVNRPVSVCLYVSNGKRKRSSTHCFKYLPVMCKEDDPLLSHPSVLPLEGVTLC
SMGGPSRVDRGLHLRNDPTPKERGLALHLPPYPSAYSPPYQGHGYQEEYCHKPEAVGNSR
GSLSERRPSFENLELGFTELLPPLYPRVSQPPSPSPWLDSPYLSSSPSPSHSSSLSPFPA
GSPISSSSLPPMTTSPYPHYPYPQEVCPSPPSNSSPYQDFYPPPYSHNEVWDHQGRGPRE
REAQAGSKMQTTPLEFASSSSIHHITLEEVNEFIGEDIRSFQSGSQTDSQPG
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgcgccgggttctggttgggaggagggggagttcgagttcaagttggttttt
gaggaggacccgacgcgccaactccggggcccatccccgctgtgcaacgcggaccaggag
cacactatcgtgggggagaggacagagagcgccctgtcgctcctagagtcgagcaatact
gagagccacctgaataccactcacgtaggccagccaatcggcatccctaccccaacgtat
tcttcagccagtcaaagggctgggatgcattccccgccccccaggcgtgccttggtgagg
gagttcagtgggacctatgagagccttccagcgagatctgtacaggtgtcagagtcccat
gtgttggagtgccctagcatccagatcaccactatctccccagaggatgacactgcccca
gcaggaagtaacttctgggacacaggaggtggatgggacagggagcgcctctaccttccc
ctaatggacccattctgctaccgcgaaggcagcaccggcgctgggtccctgagcccaagc
cctgcctccagcccctcctctcgcggctggctcagtcctgcgtccagctgtgattcgctg
ctggtggaggaggaggagctcaatgaggtcacctcccatttctgcctgtcaccctcctcc
cggcccacctcaccagggggtaagaagcgcaggaactcccctttggcctccccctgcacg
tcccgcaggagcagctactctgaggaccactcctgtaccctggagggagaagactccacc
tctcagtcacaagctcacaacagcagctttgagctgagcattccacagaaaactaggaag
acgtcactggagcaggtctcccccagggatgtggagcaggagcagggtccagcccatagc
tcccactgcccactgccagagccactgcagcaaaggagagaggttgcatccatgggcatg
gactacctgtctgtgccccctgctctgggctgggggaggaccagagccagcgcccacagc
cctatgttcagatccaatgctctaccgccacttgattggccactgccaactcagtttgac
caatatgagttgcgtatcgacgtgcagccccgcccacaccaccgagcccactacgagaca
gaaggaagcagaggagccgtcaaggcatcaccagggggacatccggttgttacgctgact
gggtacacagagagacagcccctctctttgcaggtgtttgtgggaacagctgatgacagg
tccatccggcctcatcctttctatcagatacacagggtaacaggtaagatggtgggtact
gccagtcaggagagtgtacaggctggcaccaaaatactggacatccccctcaacccagag
accaacatgactgccctcattgactgcgctggcattctgaagctgaggaactcggacatc
gagctgaggaaaggagagacagatgtagggaggaaaaacacgcgtgtgcgcctagtgttc
cgtacccacctcccccttggccttcccgtggccccgcctggacggatgctggccctgcag
gttacctccgtgcctattgagtgctcccagcgctctgctcaggagctgccagtggtggat
tcagtcagtgtcatatcgtgctctgtggaaggaggggaggagctactgttgggtggatct
aacttcctgcccatgtccagagtgctttttatggaaagagggacagatggaaagctacag
tgggaagaggaggcacatgttgaccgtgacaacagtagtgagtgcttgctgtgtgtgcaa
attccagcctatggtgacctgtctgtgaaccgcccagtatctgtgtgcctttatgtctcc
aacgggaagaggaaaaggagcagcactcactgtttcaagtacctgccggtcatgtgtaaa
gaggatgaccctctgctctcgcatccctctgtcttgcccctggagggggtgacactctgc
tccatgggggggcccagcagggtggacaggggtctgcacctgaggaatgatcccacgccc
aaggagagagggctagctttgcacctccccccctacccttcagcctactctcccccctac
caaggccatggctaccaggaggagtactgccacaagcctgaagctgtgggtaacagcaga
ggttctctgtcagaaagacgccccagctttgagaacttggagctgggcttcaccgagcta
ctgcctcccctgtaccccagagtctcccaacctccctctccctccccatggctggactcc
ccatacctgtcctcctccccctctccctcccactcctcctctctgagtcccttccccgca
ggcagccccatctcctcctcctctcttccccccatgactacctcaccctacccccactac
ccctaccctcaggaggtctgcccctcgcctccttccaactccagcccgtatcaggacttc
tacccaccaccatactcccacaacgaagtatgggaccaccagggcaggggacctcgggaa
agggaggctcaggctgggtctaaaatgcagacgacccccctggaatttgccagctcatca
tctattcaccacattacattagaggaagtgaatgagttcataggagaagacatcagatcg
ttccagtcgggctcacagacggacagccaaccaggatga
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