Oncorhynchus tshawytscha (Chinook salmon): 112260754
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Entry
112260754 CDS
T05605
Name
(RefSeq) DDB1- and CUL4-associated factor 8 isoform X1
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112260754
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112260754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
112260754
NCBI-ProteinID:
XP_024291848
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All DBs
Position
LG10:complement(67234486..67246236)
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AA seq
636 aa
AA seq
DB search
MTEKQKLNRQNINRASTHSLSSCPHEERSRMAEADGKSSELNGGSEEPDPGEDQRGEGDA
STATEEQSDSQAAPKKAEDRAKDKPMPDAEGERVPGEGEEEEDTDSVDGSGLYSLNEEGE
RDGEGGRRELVKERDAGKRAARKRNRPSGGTAHHSSSSEVEDDEEEEEQEEEDEQAMDVW
LGAELRDLGKPSWRAVPSLRLREIGRGSHQFVRRVCGARGLVQRLELQGRLERHTGCVNT
LHFNPSGTRLASGSDDLRVVVWDWARRRAELEFDSGHKSNVFQAKFLPHSGDSTLAMCAR
DGQIRVAELSAMQRCKNTKRVAQHKGAAHKLALEPDSPCCFLSAGEDAVVFGIDLRLDRP
ANKLVVVKEGDKKVGLYTIFVNPVNTHHFAVGGRDQYVRIYDQRKINENVNNGVLKKFCP
SHLVSSESKTNITCLLYSHDGTELLTSYNDEDIYLFDSSYSDGADYCRRYKGHRNNATVK
GVNFYGPSSEFVISGSDCGHIYLWDKVSARIVQFMEGDRGGVVNCLEPHPHLPGLATSGL
DHDVKLWAPTAENPTGLKGLKDVMKKNKRERDEDTVRHGDQYDTQLLWFLMRHMRNRRSQ
RTRREGAEGDTDESWSSPDSSDEEDGGPDHVQCMSS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaaacagaagctgaaccgtcaaaacataaacagagctagcacacactcgctc
tcctcctgtccacacgaagagagaagcaggatggctgaggcagatggtaaatccagtgag
cttaatggtgggtctgaggagccagatccaggagaggaccagcgtggggagggagatgct
tccacagccacagaggagcagtctgactctcaagcagctcccaaaaaggcagaagacaga
gctaaggacaagccaatgccagatgcagagggtgagagggtgcctggcgagggagaggag
gaggaagacacggacagcgtggacggcagcggcctctactccctgaacgaggaaggggag
cgagatggtgaggggggtagaagagagctagtgaaggagagagatgcaggtaagagggcc
gccagaaagaggaaccgcccgagcggtggcaccgctcaccactcctccagctctgaagtg
gaggatgatgaggaggaggaagagcaagaagaggaagacgagcaggccatggacgtgtgg
ctgggggcggagctgcgtgatctcggcaagccatcatggcgggcggtgccctccctgcgg
ttgagggagattggccggggctcgcaccagtttgtgagacgtgtatgtggcgcacggggg
ctggtccagaggctggagctacaagggcgcctggagagacacaccggctgtgtgaacacc
ctgcacttcaacccctcaggcacacgcctggcctctggcagtgatgacctacgagtggtg
gtgtgggactgggcacgtcgtcgggctgagctggagtttgacagtgggcataagagcaat
gtctttcaggccaagtttcttccccacagtggagattcaactctggccatgtgtgcccgg
gacggtcagattagagtggctgagctctctgccatgcaacgctgcaagaacaccaagaga
gtggctcagcataaaggggcagcacacaagctggccctggagccagactctccctgctgt
tttctgtcggctggagaggatgccgtggtgtttggcatcgaccttcgcctcgaccggcct
gccaataagctggtggtggtgaaggagggggataagaaagtggggttgtataccatcttt
gtgaatcctgtcaacacacatcactttgctgtgggagggagagatcagtatgtcaggatc
tatgatcagaggaagataaatgagaatgttaataatggcgtactgaagaagttctgtcca
tctcacctggtgtccagcgagtccaaaactaacattacctgcttactgtacagtcacgat
ggaacagagctcctgactagttacaatgatgaggacatctacttgtttgactccagctac
agtgatggtgcagattattgcaggcgatacaagggccatcgtaacaacgctacagtgaag
ggggttaacttctatggtcctagcagtgagtttgtgatcagtggcagcgattgtggacac
atctacctgtgggacaaggtctcagctcgcatagtccagttcatggagggagacagagga
ggagtggtgaactgcctagagccccaccctcaccttccaggtctggccaccagtggtctg
gatcatgatgttaaactttgggcccccactgccgagaaccccacagggctcaagggcctc
aaagatgtgatgaagaagaacaagcgtgagcgtgacgaggacactgttcgacatggagat
cagtacgacacacagctcctgtggttcctcatgagacacatgagaaacagacggtcccag
aggacacgtcgggagggtgcagagggagacactgatgagtcatggagctctccagattcc
tctgatgaagaggatggagggccagaccacgtccagtgcatgtcctcctga
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