Oncorhynchus tshawytscha (Chinook salmon): 112260784
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Entry
112260784 CDS
T05605
Name
(RefSeq) FERM and PDZ domain-containing protein 3-like
KO
K23959
FERM and PDZ domain-containing protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112260784
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
FERM domain-containing proteins
112260784
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
RA_2
FERM_C_FAK1
FERM_F2
Motif
Other DBs
NCBI-GeneID:
112260784
NCBI-ProteinID:
XP_042158948
LinkDB
All DBs
Position
LG21:33515240..33554585
Genome browser
AA seq
1625 aa
AA seq
DB search
MLKDDSLLLIPNVLKVFLENGQIKSFTFDSRTTVRDVISSLQDRLSLRYIEHFALVLESG
GLDQNQRLHLLQENQPLSHVVHRTYFQGMKCLFRICFFPKDPADLLRRDPAAFEYLYIQS
RNDVIKERFGMDWKSDVTLRLAALHIYITVSSARPNQKISLKNVEKEWGLEPFLPLTLLP
TIKEKNVCKTLSQLLKTYQHPPPSGNKVPPLQGKLQYMRVLNDLPPFGGLLFHTVGLDEK
QSATTLLVGPRHGIGHVIDLKNNLTTVLTEFSRVAKIQLHRENQGVARVEVAIHEAKPLV
LLMEWPDASNFACLISGYYKLFVDPKRAIYYRTPGQSYMIKAGILSIALTILSSDYRGSH
HAHPRSGVTAVPSGDRRGDERERSHTRDPGSQSQKTATAPLPAESQHLGLCHVHLREPQQ
LQELQMQAEPELDINENLISQAVPERPSAKSDPIPRSTETIGERPESPVQESSVVFRSRA
QTMGQVQRTTRFFCDSCKARLRAEGVALNGGSSSNSSKHCSSACASRDGGAVDLMALPPP
GNEEEEEVEEVGRKLQPPPPAIADPPPGFRDNSSDEDDSKRGRKSQPNPNSIPSPSTTTG
ATAGCSSAKEVVPAPEDVPVTLIDNVATRTVRDHAQELDDALVSTLQALEALAASEDFPH
HPQQPAQTTGLIVLAAITPESSLDSGHETNSSELTDVSEMVSAMKQHQNQAYLLAHHINK
ERIFSRRDFPLAIPGCTTQTIEGGAFSMGQIRGSCPSKPVTLSKIVPLKLNPAKETASPG
LSSVKQGSNVTQDPSQSEPSEGKKAKSEPTKACTQDRPAQSPEELKVSDPGQAPKVGKDQ
RSPCSTVGKLSPNLSAGIKGKKSAPLSPDPTNKALPILLAVDRTASAKICPTNMCQDAET
ASSETIKPSSSKDLLPVDDLFCTCPVREPGPQLRPKDPQSQKVVVFHSSSPTDDERLRAK
GLQLASSKEIAARAAGGAGADPVLVKPSPQVPTKYSQSPHIPVKAERKEAAEAKAERSQG
KAQAEPQKCPSKTLSLLGDSTHPTCSVDKVSTFPSADSKKQGGGKGKAQRSAPFLSIKNL
LSATFPARIRRETDERRAQLQKVRQYELEFLEELLKPKSSGGEYLPQGSSPVPSGTPCAC
QLRTSPVLKAPGISREQRRSCDCKRMCRGIRLPDTPVGSTAEPQQHRGRERSLSKTPPET
SKTPHSQGGPRRPQTLEIKTTRIRSTSLESREPRGEQASCLPTCTSRTPDCMGAPQYKKL
QRRYSIGEVDNAEGTPLYAEVKPKAKSLEKEMERVRATGLRLPTPVEPVHNQTQTHTAAA
AAKGKKGVFFVQGEELLRESKEGAPTEMLLGLPSEDSDDREKCCSFCFCYRKCEEADESS
EKEELSYSIPLQVLPGMQLDSQTLPVISKTLQVLHAEGCSGEEEEIEEEEEEEEPQTQEI
DLRACGTLEGSLARVQSLQGQTFSLPDGFLNAQLDANELLAILRQCANVPQVDNESRLQP
SRIAEYKQELAVRFKEFRAACRRVASVEKSPTRMLSVVTASFLVLCELTQTFIKLVRGVR
SEAQRLQLLRKVEEVAINYTLLLRAAEDAMGHSSSLPNKSVSPLVTTTTTNMGSLSRPMK
TLPAQ
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaggacgactctttgctactcataccaaatgtgctgaaggtgttcctggagaat
ggtcagatcaagtcctttacgtttgacagccgcaccactgtcagggatgtgatctcgtcc
ctgcaggaccgcctgtccctgcgttacatcgagcactttgccctggtgctggagtcaggt
gggctggaccagaaccagaggctacacctgctgcaggagaaccagccgctctcacatgtg
gtgcacaggacgtatttccaggggatgaagtgtctcttccgcatctgtttcttccccaag
gacccggcagacctgctgaggagggaccctgcagcctttgagtacctctacatacagagt
cgcaatgatgtcatcaaagagcgcttcggcatggactggaagtctgatgtcacactgcgg
ctggcggcgcttcatatctacatcacagtgtcatcggccagacccaatcagaagatctcc
ctcaagaatgtggaaaaggagtggggtctggaacccttcctacccctcactctgcttccc
accatcaaggagaagaatgtgtgtaagaccctgtcacagctgctcaaaacctatcagcat
ccgcctccctccggcaataaggtccctcctctccagggaaagctgcagtacatgcgtgtg
ctcaacgatcttcctccctttggaggcttgctgttccacaccgtcggactagatgagaag
cagtcggccactacgctgctggtgggtccacggcacggcatcggacatgtgatcgaccta
aagaacaacctgaccacggttctgacagagttcagtcgcgttgctaagatacagctgcac
cgggagaaccagggcgttgcccgcgtagaggtggccatacatgaggccaagcctctggtc
ctgttgatggagtggcctgatgccagtaacttcgcctgtctcatctccgggtactacaag
ctgtttgtggaccccaaacgagccatctactaccggacacctggtcagtcttatatgatc
aaggcaggtatcctttcaattgctctgacaattctgtcctcagattacagaggttcccac
catgcccacccacgctctggcgtcacagcggtgcccagtggagaccgacgaggggacgag
agggaaagatcccatacgagggacccaggttcccagtctcagaagacagcgaccgcccca
ctgcccgcagagtcccaacacctgggtctatgccacgtccatctccgggagccacaacag
ctgcaggagctccaaatgcaggcagaacccgagctcgacatcaatgagaacttaatttcc
caagcggtaccagagcggcccagtgccaagtctgacccaatcccccggagcacggagacg
atcggcgagaggccagagagccccgtccaggagagctcagtggtcttcaggagcagagcc
caaaccatggggcaggtccagcgaactacacggttcttctgtgactcctgcaaggccagg
ttgagggcagagggtgtggccttaaacggtggaagcagcagcaactcgtcgaagcactgc
tccagcgcctgtgcctcccgtgatggtggtgcagtagacctcatggccctgcctccgccg
gggaacgaagaggaagaagaggtggaggaagtaggaagaaagctgcagcctcctccgcca
gccattgctgaccctccgcctggcttcagggacaacagctcggatgaagacgactccaag
agaggacggaagtctcaaccaaacccaaactccatccccagtccaagcactacaactggg
gcaactgcaggctgcagctctgccaaggaagtggtaccggctccagaggatgtcccggtg
acattgatagacaatgtggccaccaggacagtacgggaccatgcccaggagctggatgat
gctctggtgtccactctgcaggcactggaggccctagctgcatcagaggatttcccccat
cacccccaacagccagctcagaccacagggttgatcgtgttggcggccattacgcctgag
tcatcgttggactcagggcacgagaccaactcctccgagctgacagacgtctcagagatg
gtgtcggccatgaagcagcaccagaaccaggcctacctgctggcccaccatatcaacaag
gagcgtatcttcagtcgcagggacttccccttggccataccaggctgcaccacccagact
atagagggtggtgcattctccatgggtcagatccgcggcagctgcccctcgaagccagtg
accctcagtaagattgttcccctaaagctcaaccctgctaaggagactgccagtccaggt
ctcagctcagtgaagcaggggagtaatgttacccaagacccatcgcagagtgaaccgagt
gaaggtaagaaggcaaaatcagagcctaccaaagcgtgcacccaagaccgtcctgcacag
tcacctgaggagctgaaagtgtccgatccagggcaggcacccaaggtcggcaaggatcaa
aggtcaccctgttctactgtgggaaaactaagccccaatctctctgcagggatcaagggg
aaaaagtctgcgcctctgagtccggaccctaccaacaaagccttacctattctcttggct
gtagacagaactgcctccgccaagatttgccccacaaacatgtgccaagatgccgagact
gcctctagcgagaccatcaagccttcaagctctaaagacctcctgccagttgatgaccta
ttctgcacgtgcccagtgagagaacccgggccacagctaagaccgaaggatccacaatcc
cagaaggtggtggtgttccattcctcttccccaacagacgatgagcgtcttcgggccaaa
ggcctccaactggctagcagcaaagagatcgcagcgagagcagcaggaggagcaggagca
gaccccgtcttggtcaagcccagcccccaggttccaacaaagtactcccagtccccacac
atacctgtgaaagctgagaggaaggaagcagcagaggccaaggcagagaggtcccagggt
aaagctcaagctgagccacagaaatgcccctcgaagacattatctctcctgggagactcc
acacaccctacctgctctgtggacaaggtctccacttttccatctgccgacagcaagaag
cagggtggtggtaaagggaaggcccagcgtagcgcccccttcctcagtatcaagaacctc
ctatcagccacgttcccagctcggattcggcgggagactgacgagcgcagagcccagctc
cagaaggtccggcagtacgagttagagttcctggaagaacttctgaagcccaagtcatcc
gggggagagtacctaccccaggggtcctcgccagtcccctcaggcaccccctgtgcttgc
cagctccgtacaagtcctgtgctaaaagcccctggcatctcccgagagcaacgccgcagc
tgtgactgcaagagaatgtgcagaggcatccgactgcctgatacaccggtcggctcaact
gcggagccacagcagcatagaggcagagagagatccctctccaagacccctccagagacc
tccaaaacccctcactcccagggaggtccgaggagacctcagaccttagagatcaaaacc
acccgaatccgctcgaccagtctggagtcacgggaacccaggggggagcaggcttcctgc
ttgcccacctgcacttctcgcacaccagactgcatgggcgctccgcagtacaagaagctc
cagaggcggtatagcatcggggaggtggacaacgctgaaggcacgccactgtacgccgag
gtcaaacccaaagccaagagcctggagaaggagatggagcgagtgagggccacaggactg
aggcttccaacgcccgtggagcctgttcacaatcaaactcaaactcacacggctgctgca
gcggcgaaggggaagaaaggagtgttcttcgtccagggagaagagctgctgcgggagagc
aaagagggggcaccgactgagatgctgctggggctgcctagcgaggacagtgacgacagg
gagaagtgctgctccttctgtttctgctacaggaaatgtgaggaggcggacgagagcagt
gagaaagaagagctttcctactccatccccctccaggtcctgcctgggatgcagctggac
tctcagaccttgcccgtcatcagcaaaaccctccaggttctccacgctgagggctgcagc
ggggaggaggaagaaatagaggaagaggaagaagaagaagaaccgcagacacaggagatt
gacctccgggcctgtgggactctggagggtagcctggcgagggtccagtccctgcaaggg
caaacgttcagcctgccggacggtttcctcaacgcccagctggatgctaatgagctgcta
gccatcctgcgacagtgcgctaacgttccccaggtggataacgaatcacgcctccagccg
tcccggatcgccgagtacaagcaggagctggcggtgcgcttcaaggagttcagggcggcg
tgcagacgggtggcgagcgttgagaagagccccacgcgcatgctgagtgttgttacggcc
agcttcctggtcctctgcgaactgactcagaccttcatcaagctggttagaggggtgcgt
tcagaggcccaaaggctgcagctgctgcggaaggttgaagaggttgctatcaattacact
ttgttgttgcgtgcagccgaggatgctatgggtcactccagtagtctgcctaacaagagc
gtgagtcccctagttactacaaccaccactaacatgggctccctctctcgcccaatgaaa
accctgcccgcccagtag
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integrated database retrieval system
