Oncorhynchus tshawytscha (Chinook salmon): 112260820
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Entry
112260820 CDS
T05605
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecule (CAM) interaction
otw04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
112260820
04517 IgSF CAM signaling
112260820
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112260820
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112260820
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112260820
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112260820
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Type II RPTP family
112260820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_2
FN3_DSCAM-DSCAML_C
Fn3_VIN3
ig
Pur_ac_phosph_N
Tc-R-P
PTP-SAK
DSPc
fn3_2
Y_phosphatase3
Tissue_fac
PTPlike_phytase
Fn3_PTPRU
V-set
Ig_VEGFR-1-like_5th
PTP-NADK
fn3_SORL1
Ig_PDGFR_d4
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
112260820
NCBI-ProteinID:
XP_042184895
LinkDB
All DBs
Position
LG10:70248633..70400859
Genome browser
AA seq
1550 aa
AA seq
DB search
MVPPRPGGTVAQSRATRPGYGLCLYPPCLLLPLLVLTSLPNLSGAVAAPKFTKIPGDQIG
VSGGVASFVCQASGDPKPMVNWNKKGKKVNSQRIETIEFDDGAGAVLRIQPLRAPRDENV
YECVARNSEGDVATTAKLAIIREDLLPFGFPSIDMGPQLKVVERTRTATMLCAASGIPDP
EISWFKDFLPVEPSSSQGRIKQLRSGALQIENSEELDQGKYECVATNSQGVRYSSPANLY
VREQREGSTDKLRRVPPRFSILPSNHEIMPSGSINITCVAVGSPMPYVKWMLGSEDLTPE
DEMPVGRNVLELNGIRESANYTCVAMSSLGVIEATAQVSVKTLPKPPGTPIVTETTATSV
TITWDSGNPDPVSYYIIQYRAKAPDSKYETVDSITTTRYSIGGLYPNTEYEIRVSAVNSI
GQGPSSTRVEARTGEQAPASPPRNVQARIISKNTVMVRWEEPEEPNGQVKGYRVYYTMDP
SQPMSLWQIHNVQDSTITSIQSLVPSETYTVRVLAFTSVGDGPFSDPVHVKVLPGVPGQP
GKFKVGKVTETSIELTWEPSYIKEGIVNYELLYKPVKFGSLEKLTFGPRASYTVEGLRAN
TEYSFSLAAISNKGIGAFTNELVQRTAQANVPRNFSVNLATKTSVLLTWEFPESPYPYHF
TVEYNRQKMEVDAKLRKAVIPNLQPDTDYDFKITSSEGNMGGLRHRIHAKTSPPIAIRRP
EIDHTRDTETTITIILPSLENRIPVKNLYVVVVPLRRARGVIRHLKSPDEMDLEELLKDS
SQRQRESRQQKQVDLRRAYISALFTPATLPAFFTLGDQLDYGGFENRALEPGQEYVFFIL
AELNGTTVKMYADSPYTEPVIAPDSDPQPLDAGDGLIWVVGPVLAVVFIICIVIAILLYK
NNKPDSKRKDSEPGTKSLLCNAEMMAHHPTDPVEMRRINFQTPGMMSHPPIPITELAEHT
EILKANDSLRLSQEYESIDPSQQFTWEHSNLEVNKPKNRYANVIAYDHTRVVLAPIEGSS
PGILGSDYINANYIDGYRKQNAYIATQGPLAETFGDFWRMVWEQRAASVVMMTRLEEKSR
IKCDQYWPSRGTETYGMTQVTILDTMELATFCVRTFSLQKNGCNERREVRQFQFTAWPDH
GVPEYPTPFLAFLRRVKACNPPDAGPVIAHCSAGVGRTGCFIVIDAMLERIRHERTADIY
GHVTLMRSQRNYMVQTEDQYGFIHEALLEAVACGNTEVAARSLFSYMQKLGKVESGEHVT
GMELEFKERVSVGGKLNPPLHPSPSPQRLANTKAHTSRFVSANLPCNKFKNRLVNIMPYE
TTRVCLQPIRGLEGSDYINASYIDGYRQQRGYMATQGPLAETTEDFWRMLWEHNSTIVVM
LTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQ
FQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLE
RMRYEGAVDIFQTVKMLRTQRPAMVQTEDEYQFSYQATLEYLGSFDHYAT
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggttccccccaggccaggtggaactgtagcccagtccagggcgactcgtcctgggtac
ggactctgcttgtaccccccttgtctgctgctgccactgctggtgctcacatccctgccc
aacctgtctggggcggtggcggcacccaagttcaccaagatccccggggaccagatcggg
gtatcggggggtgttgcctcgtttgtgtgccaggcgtcaggtgaccccaaacccatggtc
aactggaacaagaagggcaagaaggtcaactcccaacgcatagagacaatagagtttgat
gatggagcgggggccgtactgaggatccagcctctcagggccccccgagatgagaatgtc
tatgagtgtgtggcccgcaacagtgagggagatgtggccaccactgccaagctggccatc
atacgagaggacctgttgccatttggtttccccagcattgacatgggtcctcagctgaag
gtggtggagaggaccaggacggccaccatgctgtgtgctgccagtggcatccctgaccca
gagatctcctggttcaaagacttcctccctgtagagcccagctccagccagggacgcatt
aaacagctgcgctcaggtgccctccagatagagaacagtgaggagttagaccagggaaag
tatgagtgtgtggccactaactctcagggagtgcgttactcttccccggccaacctgtat
gtacgagagcaacgagaaggatcaacagacaaattgcgtcgtgtgcctcctcgtttctcc
atcctgccctccaaccatgagatcatgcccagcggcagcatcaacatcacctgtgtggcg
gtgggttcacccatgccctacgtcaaatggatgctgggtagtgaggacctgacacccgag
gacgagatgccggtggggcggaacgttctggagctcaacggaatcagggagtcggccaac
tacacctgtgtggccatgagcagtctgggggttatagaggccactgcacaggtgtcagtt
aagactcttcccaagcctcccggtacccccatcgtcacggagacgactgccaccagcgtc
accatcacctgggactccggtaaccccgacccggtgtcctattacatcatccagtaccgg
gccaaggcaccagacagcaagtacgagacggtggacagtatcaccaccaccaggtacagc
attggagggctctaccccaacacggagtatgagatcagggtgtcagccgtcaacagcatc
ggccagggaccctcgtccacccgggtggaggccaggacaggggagcaggccccggctagc
ccccccaggaacgtccaggccaggatcatctccaagaacactgtcatggtccgctgggag
gaaccagaggagcccaatggacaggtgaaaggttaccgggtgtactacaccatggaccca
tctcagcccatgagtctgtggcagatccataatgttcaggacagcaccatcacctccatc
cagagcctggtaccctctgaaacatacactgtcagagtcctggcctttacatctgtggga
gacggacccttctcagatcctgtccatgtcaaagtgctgcccggagttccagggcagcca
ggaaagttcaaggtgggcaaggtgacggagaccagtatagagctgacctgggaaccgtcc
tacatcaaggagggcatcgtcaactacgaactgctctacaaacctgtcaagttcggcagc
ctggagaagttgacgtttgggcccagggcttcgtacacagtggagggtctgagggctaac
acggagtactccttctccctggctgccatttctaacaaaggcatcggagcctttaccaac
gagctggtccagaggacagcacaagccaatgtcccgaggaatttctcagtgaacttggcg
accaagacgagtgttctcctgacctgggagttccctgagagcccctacccctaccacttc
actgtggagtataaccgccagaagatggaggtggatgccaagctgaggaaagcagtgatc
cccaacttgcagccagataccgactatgacttcaagatcacctcctctgagggcaacatg
ggcgggctgaggcaccgcatccacgccaagacctctccaccaattgccatccgccgtccg
gagattgaccacacccgtgacacggagaccaccatcaccataatcctgccctcgctggag
aatcgcatccctgtcaagaacctgtatgtggtggtagttcctctgaggagggcgaggggg
gtcattagacatctcaagagcccagacgagatggacttggaggagttgttgaaggacagc
agtcagagacagagggaatctagacagcagaaacaggtagacctgcgcagagcctacatc
tcagccctcttcacccctgctactctgccagccttcttcactctgggggaccagctggac
tatggaggctttgagaaccgcgctctagaaccaggacaggagtacgtgttcttcatcttg
gcagaactcaatggcaccacagtgaagatgtatgcggacagtccgtacacagagccagtg
atcgctccggactcagacccccagcccctggatgcgggggatggtctgatctgggtggtg
ggacccgtcctggctgtagtcttcatcatctgcatcgtcatcgccatcctgctctacaag
aacaacaagccagacagcaagaggaaggactccgagccaggcaccaagagccttctgtgt
aatgctgagatgatggcccaccaccccacagaccctgttgagatgagacgcatcaacttc
cagacccctggtatgatgagccaccctcccattcccatcacagagctggctgaacacaca
gagatactcaaggccaatgatagcctgcgtctgtctcaggagtacgagtccatcgacccc
agtcagcagttcacctgggagcactccaacctggaggtgaacaagcccaagaaccgttat
gctaacgtcatcgcctatgaccacacccgcgtcgtcctcgcccccatagaaggttcaagt
ccaggtatcctgggcagtgactacatcaatgctaactacatagacggctacaggaagcag
aatgcctacatcgccacacagggcccgctggcagagacattcggggacttctggaggatg
gtgtgggaacagagagcagcctctgtggtcatgatgaccagactggaggagaagtcacgg
ataaagtgtgaccagtactggccaagccggggtacagagacctatgggatgactcaggtc
accatactggacactatggaactagccacattctgcgtgcgcaccttctccctgcagaag
aatggttgtaatgagcggagggaggtacgtcagttccagttcactgcctggccagaccac
ggtgtaccagagtaccccactccgttcctggccttcctacgcagggttaaagcctgcaac
ccccctgacgctggtcctgtcatcgcacactgcagtgcgggcgtgggtcgtaccggttgc
ttcatcgtgatcgacgccatgctggaacggatcagacatgagcgcacggccgacatctat
ggtcatgtgactctgatgaggtcacagcggaactacatggtgcagacggaagaccagtac
ggcttcatccacgaggcgctgctggaagcagtggcttgtgggaacacggaggtggcggcc
cggagtctgttctcctacatgcagaagctgggcaaggtggagagtggagagcacgtcact
ggcatggagctggagttcaaggaacgtgtttctgtgggggggaaactcaatccccccctt
cacccctccccctccccccagcgtctggccaacaccaaagcccacacgtctcggtttgtc
agtgccaacctgccatgtaacaagtttaagaaccgcctggtcaacatcatgccctatgag
accacccgcgtctgtctgcagccaatccgaggtctggaaggatcagattacatcaatgcc
agctacattgatggatacaggcagcaaagaggttacatggccacccagggcccactggct
gagaccacagaggacttctggaggatgctgtgggaacacaactctaccatcgtggtcatg
ctcactaaactgagagagatgggacgggagaagtgccatcagtactggcccgcagagcgg
tctgctcggtaccagtactttgtagtggatcccatggctgaatacaacatgcctcagtat
atcctcagagagtttaaggtcaccgatgcaagggatggccaatcacggacagttcgtcag
ttccagttcaccgattggccagagcagggagttcctaaatctggtgagggcttcatcgac
ttcattggccaggtgcacaaaaccaaggagcagtttggacaggacggcccaatcagtgtc
cactgcagtgcgggtgtggggaggaccggagtcttcatcactctgagtatcgttctggag
aggatgcgttacgagggagctgtggacatcttccagactgtcaagatgctgaggacacaa
cgccctgccatggtacagacggaggatgagtaccagttctcctaccaggctaccctggag
tacctggggagttttgaccactatgcaacctaa
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