Oncorhynchus tshawytscha (Chinook salmon): 112260830
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Entry
112260830 CDS
T05605
Name
(RefSeq) serine/arginine-rich splicing factor 6
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112260830
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112260830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112260830
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
SR proteins
112260830
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
112260830
NCBI-ProteinID:
XP_024291958
LinkDB
All DBs
Position
LG31:31514476..31522402
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AA seq
391 aa
AA seq
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MSRVYIGRLSYRAREKDVEKFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDL
CGERVIVEHTKGPRRDGSYGSGGGGGGGGGGGGGRSGGGYGRGGRDRYGPPARTDYRLIV
ENLSSRCSWQDLKDYMRQAGEVTYADTNKGRRNEGVIEFRLYSDMKRALEKLDGTEVNGR
KIRLIEDRPGAKRSKRSYSRSRSRSRSRSRSRRSRKSRSDSSSRSRSRGAGSRSRSRSHS
KKDKTKGSRDEERTNGAHKAKEGRGARSKSRSRSRSKSKKSSKKEGKKSRKDESRSRSRS
RSAAKDRSRKSGSKSREPAKSDDEGAAAEKGAARSRSRSHTPAESKPKSKSKSPSPSPAK
ARSRSPSVSRSESHSKSRSASRSRSRSLSES
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagtttacattggacgattgagctatcgagccagagaaaaggacgtggagaag
ttcttcaaaggctatgggaagatacttgaagttgacctgaaaaacgggtatgggtttgtt
gaatttgatgacccccgcgatgcagatgatgctgtgtatgacctgaatgggaaagacctg
tgtggggagagggttattgtggaacacacaaaggggccgcggcgggacggcagctatggc
tccggaggaggcggcggaggaggtggcggcggaggaggtggaagaagcgggggtgggtac
gggcgtggtggcagagaccgatatggcccaccggcaaggacagactatcgactgatcgtc
gagaacctgtccagtcgctgcagctggcaggacctgaaggactacatgaggcaggcgggt
gaggtgacatatgctgacaccaataaggggcgcaggaacgagggcgtgatagagttcagg
ctgtactctgacatgaagagagccctggagaagctggacggcaccgaggtgaacggcagg
aagatccggctgattgaggaccgccccggggccaagcggagcaagcgctcctactcgcgc
agtcgcagccgctcccggtctcgctccaggagccgtaggtcccgtaagagccgcagtgac
agcagcagtcgctcccgctccaggggtgctggctcccgctcccgtagccgctcccacagc
aagaaggacaagaccaagggtagcagagatgaggagcgcaccaacggtgcccacaaggcc
aaggaggggcgcggggcccgcagcaagagccgcagcaggagccgcagcaagagcaaaaag
agcagcaagaaagaagggaagaagagcaggaaggatgagtctagatccaggtcccgctcc
agatcagcagctaaggatcgctcccggaagtcgggttcaaagagccgcgagccggccaag
agcgatgacgagggagctgcagctgagaagggggccgcccgttcccgctctcgctcccac
acccctgccgaatccaaacccaagtcaaagtccaaatctccatctccctccccggccaaa
gcccgctcccgttccccctccgtctcccgctcagagtcccactccaaatctcgctccgcg
tctcgttctcgctcccgctctctatcagagtcctga
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