KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112260838
Entry
112260838         CDS       T05605                                 
Symbol
sf3a2
Name
(RefSeq) splicing factor 3A subunit 2
  KO
K12826  splicing factor 3A subunit 2
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112260838 (sf3a2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:otw03041]
    112260838 (sf3a2)
Spliceosome [BR:otw03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112260838 (sf3a2)
 Complex B
    112260838 (sf3a2)
 Complex C
   U2 SnRNP specific factors
    112260838 (sf3a2)
SSDB
Motif
Pfam: SF3A2 zf-met CactinC_cactus LRR_FBXL18 PRP4
Other DBs
NCBI-GeneID: 112260838
NCBI-ProteinID: XP_024291968
LinkDB
Position
LG10:complement(71397175..71405823)
AA seq 308 aa
MDFQHRAGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCL
TLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVT
KQRDPESGQQSLLFQIDYPEISEGIGPRHRFMSAYEQRIEPPDRRWQYLLLAAEPYETIA
FKVPSREIDKAESRFWTHWNKDTKQFFLQFHFKMEKSLAPPSGPVPPMGVKRPPPLMSGI
GPRPPNEAMPPPPPGGMHMPPLPPGAPGPPQMHHHHQMQHGGPGMGMPPLMRPPLPSDSH
GGMPHQNN
NT seq 927 nt   +upstreamnt  +downstreamnt
atggatttccaacacagagctgggggcaagacggggagcggtggcgtggcgtcgtcctcg
gagagcaaccgggataggcgagagcggctccgccagctggccctggagaccatcgacatc
aacaaggacccctatttcatgaagaaccatctgggctcttatgagtgtaagctgtgtttg
acactacacaacaatgagggcagctatctggcccatacacagggaaagaagcatcagacc
aatttagcgagaagagcagccaaagaagcaaaagaagcccctgcccagccagcccccgaa
aaggtgaaggtcgaggtcaagaaatttgtgaagattggtcgaccagggtacaaagtaacc
aagcagagagatccagagagtgggcaacagtctttacttttccagatagattacccagag
atatcggagggcatagggcccaggcatcgcttcatgtctgcatacgagcagcgcattgag
cccccagatcgtcgttggcagtaccttctactggctgcagaaccatatgagaccatcgcc
ttcaaggtgccaagcagagagattgataaagctgagagtcggttctggacccactggaac
aaagatacaaagcagtttttcctccaattccacttcaagatggagaaatctctcgctcca
cccagcggacccgtacccccgatgggtgtaaagcgcccccctccgctgatgagtgggata
ggtcctcggccccccaatgaggccatgccccctccacccccaggggggatgcatatgcca
cccttgccccctggtgcccctggccctcctcagatgcaccaccatcatcagatgcaacac
ggtggccccgggatgggcatgccacccctgatgagacccccgctcccttctgacagtcat
ggaggaatgccccatcaaaacaactga

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