Oncorhynchus tshawytscha (Chinook salmon): 112260852
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Entry
112260852 CDS
T05605
Name
(RefSeq) transcriptional repressor p66 alpha isoform X1
KO
K23194
transcriptional repressor p66
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112260852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112260852
03036 Chromosome and associated proteins [BR:
otw03036
]
112260852
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
112260852
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
112260852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P66_CC
GATA
Elf1
Motif
Other DBs
NCBI-GeneID:
112260852
NCBI-ProteinID:
XP_042184927
LinkDB
All DBs
Position
LG10:complement(71821731..71855975)
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AA seq
791 aa
AA seq
DB search
MSEEAVRQTRSQKRALGREISPHDSEAPPTQSDSKKLKLDGAETGAPDQDHESPNEPEPQ
PETTKDDEDLVKPLVKPVVQPEKAMEPELPRLTLPLVLPSHPAKEQEQDRAPKQSEQSLE
NRTERNDCGDQVKVKSEMHLDGQNRTVRSEPKVASSMMTSTEVKATIKVEVQTGEQALDM
STSRGAIKREPCPPSPDDDDDDDDDDVIVLSDNDSCSPPMNGLNHFKELDTVLLMKSRPE
ERDRIIKQLKEELRLEEAKLVLLKKLRQSQIQKDALQKVWTHAAKPSGLSGSAAPPSLIR
GSIAASKGSQQVVSGRSSGTVIPPPLVRGGQQISSKHGSHNSQIIMPPLVRGAQPIAVSP
QQIQSLRQQQQQQLSGSGSGSSGPPPLLLAPRANVPGSQAQRGLMQSSLIRVGNVNNASL
LVNISQASPTNMKGSSISSQSGNSSVSVVNVNDSPVARQAAAKLALRKQLEKTLLEIPPP
KPPAPELNFLPSAANNEFIYLVGLEDVVQNLLDSMMRAKTGLPPVKPAIKEPFTCIQCST
DFTCRWRQDKAKGGTILCADCMSSNQKKALKAEHTNRLKAAFVKALQQEQEIEQRILQQT
ASPVSHTPSSSSSSSSPSVKAEHLMSQQLKQVQAQARVSSLQHHHHHQQQNRGQSIARHH
SNIKQSPQGQLSRGGIPSVGVRGVSHSFSSSSSQLQSAVAAAALVSRPGKHAHVRPAAQG
SKGSSSGNSSRGSAQATAWRKQNINTGVTMAYVNPSLSVHKTSSTVDARQREYLLDMIPS
RPISQTANTWK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaggctgttcgtcagacacgcagccagaagagggcgctggggagggaaatc
tcaccccatgattctgaagcacctcccactcagtctgacagcaaaaagctcaaactagac
ggggccgagactggagctccggaccaggatcatgagagcccaaatgaaccagaaccacaa
cctgaaacaacgaaggatgacgaggacctggttaaacctctggtcaagcctgtggtccag
cctgagaaggcaatggaaccagaactaccccgattaacattaccgttagtgttaccatcg
cacccggcaaaagagcaagagcaggacagggcaccgaaacagtctgaacagagcttagag
aaccggactgagcggaatgactgcggcgaccaggtaaaggtgaagagtgagatgcatcta
gatgggcagaaccggactgtgcggtcagaaccgaaggtggccagcagcatgatgacgtca
acggaggtgaaggctaccattaaagtggaggtccagacaggagagcaggctctggacatg
agcacctctagaggggccataaagagggagccctgtcccccgtccccagatgatgatgat
gatgatgatgatgatgatgtcattgtcctgtcagataacgactcctgcagtccgccgatg
aacggtttgaaccacttcaaggagctggacacagtcctactcatgaagagcaggccagag
gagagggatcgcatcatcaaacagttgaaggaggagctgaggttggaggaggccaagctg
gtgctgctgaagaaactacgccagagccagatacagaaggatgcgttgcagaaggtatgg
acacatgcagccaagccctcaggattgtcgggttctgcagctcctccatctctgatccgg
ggatccatcgcagccagcaaaggctcccagcaggtggtgtcaggtaggagttcaggcaca
gtcattccacctcctctggtgaggggagggcagcagatctcctccaaacatggctcccac
aactcccagatcatcatgccacctctggtcagaggggcacagccaatcgctgtgtctccc
cagcagatccagtctctccggcagcagcagcaacagcagttgtcagggtctggctcaggg
agctctggcccccctcctctgctgctggctcccagggccaacgtacccggctctcaggcc
cagagaggcctcatgcagtcaagcctcatcagggtgggcaacgtcaacaatgccagcctg
ctggttaacatctcacaagcctctccaaccaacatgaagggttcttctatctcttcccag
tctggaaacagcagtgtgtcagtggtcaacgtgaacgactctcctgtcgcccgccaggct
gcggctaagctagccctgcgtaagcagctggagaagacccttctggagattcctcctccc
aagcctcccgccccagagctcaacttcctgccctcggcagccaacaacgagttcatctac
ctagtgggcctggaggacgtggtgcagaacctgctggactccatgatgagagctaaaaca
gggttgcccccggtcaagcctgccatcaaagagcccttcacctgcatccagtgtagcacc
gactttacttgtcgctggaggcaggacaaggccaagggcgggaccatactctgtgctgac
tgcatgtcctccaatcagaagaaagccctaaaggcagagcacaccaataggctgaaggct
gcgttcgtcaaggccctgcagcaggagcaggagatagagcagcggatcctccagcagacc
gcctcccctgtctctcacaccccctcctcctcttcctcctcctcctctccgtcggtgaag
gcggagcatctgatgtcccagcagctgaagcaggttcaggcccaggctagggtctcctct
ttgcagcaccatcaccatcaccagcagcagaacagaggacagagcattgcacgccaccac
tccaacatcaaacagagccctcagggccagctctcccgtggcggtatcccatcggtgggg
gtgaggggcgtgtcccactccttctcctcctcctcctctcagctgcagagcgctgtggcc
gctgcggccttggtcagccggccaggtaagcatgcccatgtgcgccccgctgcccagggt
tcaaagggcagctccagtgggaacagcagcagaggtagcgcccaagccactgcatggagg
aagcagaacatcaacacaggtgtgaccatggcctatgtgaaccccagtctgtcagtccat
aagacctcgtccacagtggacgcccgccagagagagtacctcctggacatgattccatcg
cgccccatctcccagacagctaacacatggaaataa
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