Oncorhynchus tshawytscha (Chinook salmon): 112260980
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Entry
112260980 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 11 isoform X1
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
112260980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112260980
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112260980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
WDCP
Rep_fac-A_C
Motif
Other DBs
NCBI-GeneID:
112260980
NCBI-ProteinID:
XP_042184175
LinkDB
All DBs
Position
LG10:complement(17003233..17035172)
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AA seq
1455 aa
AA seq
DB search
MSLRTPTSTLDSPFAAWLSSLTIGDSERNTSSGQQREPPADIPPENTGPGLVQRCVVVQK
DQLGFGFTVCGERIKLVQNVRPGGAAVKAGVHEGDRIIKVNGSLVSSMSHQEVVKLIKSG
PYVALTLQGPPPSAAALVLQPLPADLLPNQRTSLGGEAPPPPPPPLPPGLTSTPSQRINK
PLQNLDVQKHATQILRNMLEQGEAELQDLMEELSRNPSPSLEERIDSAKRRAQQVRVKIK
QDLDGTRPEAVSNYVIAGDARLSVDSSEGDFETRESPHSSPSFFRTPLRWRQGSDTHTFS
DSAGKTQIIGPEEEEEEDDSYALNEMDGPFQDIELLKSRPAHMTVFMRYVFSQLLDPNPL
LFYLSVEAYLGSSPKDARALAPQICSHFLDPDAPLKIRVREEYLADIESRLHAQEDIRGP
LSELQQQVLPDIQDQIQDYRNKQMMGLGSLFGEGDLQQLDGDPAKEKQVVDRQVTALWEI
LSKHEDDRSSPLASAVLLYLRHSGIKLRDSRVFPGLSTEKEKWLAFFPKTKKLSSAKKEK
DGEDRKRNPILKYIGKPRSTSQSTFHVPLSPTEVRPGSVRNIIQQFENHPEIPGEEGDEG
DLQRLSSSSLGEDSMDSPMVSVRLARSESLKAQGEGRRRGGASGVETVPRSRSDVDMEDC
GEEIEGPGLRPLHHSASSSATSSSARSLENPTPPYTPRSSRRQFEESPVALLPDAPALED
DVVESHNWQETVAPQVLATLCPREVDRQAVIYELLTTEASHLRTLRVLDQVFFQKMRCVL
SSDELACIFPNLPQVYQLHVSLCEAMKKKRESPIVQGIGDIMLARFEGVAGEEFQEQASH
LCSQQSQALELIKNKQRKDPRFTHIIQECEASPHCRRLQLKDLLVSETQRLTKYPLLLDN
IIKHTEAGSTDLPPLQRAQACCRGILQAVNEVVRETEHRQRLNQYQRRLDPTPQFKSLDL
TSKTMIHEGPLTWKVNKDKTLEIQALLLSDLLVLLQRGPDDRLLLRCPSRWLGGGGGGSG
DTKASFSPVVQLDSLLVRSVATDNKALYVISTTERKIYELVAGTSSEKNIWKDQLEKTIS
LVAGSSPSTNNRSTPIFSPCLGNASPVSTGSHVYQSDHSMTEQVVFMETDSPNDEDNELA
RTTPTDQSGAFFCGEGQDYVKRRIGVAEAALEDVETLRQLIFRDLEDGWSHGSDGTPTNE
AANERSPFNDHQRPPSSETLLSVSPSQWEAEHAEAPPSEVECPSVHVVRKAVVAGSPSIP
DDITEDVTLLTHQSPEPRGEASVRGNVFYLVMPTEQGEGLLDESHTDEVNDPTTTELPDL
EQEVISSPVQTHEKEGQVASIMSADNQSERGNLSRQEGQSQSQKSLQSHIIKNVDDIFHT
IEELMRKLHQLRDIETAHHQLLKTLREPPVNPESGDLFHIQATVVRTQFLDRDPGDGKEA
SPAEPAKLKILSTGF
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccgcacccccacctcaacactggacagcccttttgctgcttggctaagcagc
ctgacgataggagactcggagcgcaacacctccagcggccagcagagggagcctccagct
gacatcccccctgagaacacaggtccaggtctggttcagagatgtgtggtggtacagaaa
gaccagctgggatttggcttcaccgtgtgtggcgagaggatcaagctggtgcagaatgtc
cgaccaggtggtgcagcagtcaaggcaggggtccatgagggagacagaatcataaaggtg
aatggctcgctggtgtcgtccatgtctcaccaggaggtggtgaagctcatcaagtctggg
ccgtatgttgccctgacacttcaaggaccgcccccttcagcagccgccctcgtcctacaa
cccctccccgctgacctcttacccaatcagaggacgtcactgggaggtgaagccccgcca
ccaccacctccacccctgccccccggacttaccagcaccccctctcaaagaatcaacaaa
ccactacagaacctagatgtacagaaacacgccactcagatcctcaggaacatgttggaa
cagggagaggctgagctccaggacttgatggaggagctgtcacggaacccctccccatca
ctggaggagcgaatcgatagtgccaagaggcgcgcccaacaagtgcgggttaaaatcaag
caagatctggatggaactcgccccgaagctgtgtccaactatgtaatagcaggagatgct
cggctgtcggtggactcaagtgaaggagactttgagacccgtgagagcccccactcctcc
ccctccttcttcaggacccccctacgctggagacagggctccgacacacacaccttctct
gactcggctgggaagactcagatcattggccccgaggaagaggaggaagaggatgacagc
tatgcactcaatgagatggacggtccatttcaggacatagagcttctcaagtcgagaccg
gcccatatgacggtgttcatgagatatgtcttcagccagctactggatcccaacccactg
ctgttctacctgtcggtggaggcctacctgggctccagccctaaagacgcccgtgccctc
gcgcctcagatctgctcccacttcctggaccctgacgctccgttaaaaatcagagtacga
gaagagtacctggctgatatagagagtcgtctccatgcccaagaggacatcaggggacca
ctgtctgagctccaacagcaggtgctacctgacattcaggaccaaatacaggactacagg
aacaagcagatgatgggtctgggctctctgtttggagagggagacctgcagcagctggat
ggagacccagccaaggagaaacaggtggtggacagacaggtcactgctctctgggagata
ctctcgaagcacgaagacgacagaagttctcctctagcctctgcggtgctgttgtacctc
cgtcactcgggcattaagctgagggattccagggtgtttccaggactcagcactgagaag
gagaagtggctcgcctttttccccaagaccaagaagctgagcagtgcaaagaaagaaaag
gatggagaggacaggaagagaaaccccatcctgaagtatatcggcaagcccaggagcacc
tcccagtccacgttccatgtccccttgtctcccactgaagtacgtcctggcagtgtgagg
aacatcatccagcagtttgagaaccacccagagatccccggggaggagggggacgaggga
gacctccagagactgtcctccagcagcctgggagaggacagtatggacagccctatggtg
tcggtgcgtctggctcgtagtgagtctctgaaggcgcagggggaggggcgtcggcggggc
ggggcttcaggagtggagacagtccctcgttcccgtagcgacgtggacatggaggactgt
ggggaggagatagaggggccgggcctgagacccctacaccacagcgcctcctcctcagct
accagtagctcagcacgatccttggagaaccccacgcctccatacacccctcggtcgtct
agacgacagtttgaggagtccccggtggccctgctccctgatgccccagccctagaggac
gacgtggtggagagtcacaactggcaagagacagtggcccctcaggtcctggctacactc
tgtccccgagaggtggaccgacaggccgtcatttacgagttgttgacgacagaggcgtct
cacctgcgtactctcagggtcttggatcaggtgtttttccagaagatgaggtgtgttctg
agctctgacgagctggcctgcatcttccccaacctgcctcaggtctaccaactacatgtg
agcctgtgtgaagccatgaagaagaaaagggaatctcccatcgttcagggcatcggtgac
atcatgctggccaggtttgagggcgtggcgggggaggagtttcaggagcaggcgtcccac
ctgtgcagccagcagtctcaggctctggaactcattaagaacaagcagcgcaaagacccc
cgcttcacacacatcatccaggagtgtgaggccagtcctcactgtaggaggctgcagctg
aaggacctgctggtgtctgagacacagagactcaccaagtaccctctgttactggacaac
atcatcaaacacacagaggctggctccacagacctcccgcctctccaacgtgcacaggcc
tgctgccgcgggattctgcaggccgtcaatgaagtcgtcagggagactgaacaccggcaa
cggctcaaccaataccagcgcaggctggaccccacgccacagttcaagagtctggacctg
accagtaagacaatgatccatgagggtcctctcacctggaaagtcaataaagacaaaact
ttagagatccaggccctgctgctatcagacctgctggttctgctccagagaggtccagac
gaccggctgctactgcgctgtccgtcccgctggctggggggaggaggaggtggtagcggg
gacaccaaggcatccttcagccctgtggtccagctagactccctcctggtgcgctctgtg
gccacagacaacaaggccctgtacgtcatcagcaccacagagagaaagatctatgaactg
gtagcggggacatcctcagagaaaaacatctggaaggaccaacttgaaaagaccatctca
ttggttgctggctcctcaccttcgaccaataacagatccacacctattttctccccatgt
cttggcaacgcttcccctgtctcaactggcagccatgtctatcaatcagaccactcgatg
acggagcaggtggttttcatggagacggactcccctaacgatgaggataacgagctcgca
cgcaccacaccaacggaccaatcaggagctttcttctgcggggaggggcaggactacgtc
aagcgacgaattggagtagcagaggcagctcttgaagacgtggagacgctaaggcagctg
attttccgcgacctggaagatgggtggagtcacggctcagatggcacgcccacaaatgag
gcagccaatgagaggagcccgttcaatgaccaccagaggccgccgtcctctgagactctc
cttagcgtcagtcccagccaatgggaggctgagcacgcagaagccccgccctcggaggtg
gagtgccccagtgtgcatgttgtgaggaaagctgtggttgcgggctccccttctatccct
gatgacatcactgaagatgtcaccctcctcacccaccaatcacctgagccgagaggcgag
gccagtgtacggggaaacgtgttctacctggtgatgcctacagagcagggagagggactg
ctggacgagagtcacacagatgaggtcaacgacccgaccaccactgaacttcctgatctg
gaacaggaagtgatttcatcgcccgtacagactcatgagaaagaagggcaggtcgcttcc
atcatgtctgcggacaatcaatcggagaggggaaatctgagtcggcaggaagggcagagt
caatcacaaaagagcctccagagccatataatcaaaaacgtggatgacattttccacacc
atcgaggagttgatgagaaagctgcaccagctgagggacatagagacagctcatcaccag
ctcctgaaaacactgagagagccgcctgtcaatccagagtctggtgacctctttcatatc
caggcaaccgtcgtcaggacacagtttctggaccgggacccaggggacggaaaggaggcg
agcccagcagagccagccaagctgaagatcctctccactggattctaa
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