Oncorhynchus tshawytscha (Chinook salmon): 112260982
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Entry
112260982 CDS
T05605
Name
(RefSeq) inactive heparanase-2-like
KO
K07965
heparanase 2 [EC:3.2.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00531
Glycosaminoglycan degradation
otw01100
Metabolic pathways
Module
otw_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112260982
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112260982
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Enzymes
112260982
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
112260982
NCBI-ProteinID:
XP_042184273
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All DBs
Position
LG01:74749718..74866883
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AA seq
640 aa
AA seq
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MPNPATCHFPGSRLWLVSVALMVQSVISSSSTYQRPAPGGGGKRTGFMERTLILLDVNTR
SPVQVLNDNFLSLQLDPSIIKDGWLDFLSSKRLVTLARGLSPAYLRFGGKRTDFLHFHNL
KNLAKFRGPGPDYYLKNYEDDIVRSDIALDKQRGCKLANHPDMMLELQREKAAQMQLVLL
KEQLSNLYSNITITARSLDKLYNFAECAGLHLVLGLNAQQRNPDSSWNSSSALSLLKYSA
GKKYNISWELGNARSLDKLYNFAECAGLHLVLGLNAQQRNPDSSWNSSSALSLLKYSAGK
KYNISWELGNEPNGYRSMMGQTVNSTQLAQDYTLLRTLLQSVRYYSRAHLLGPNAGRPRK
NAILLLDGFMKNAGSVVDAVTWQHYYMDGRVTKVEDFLKTRLLDTLTEQITKVLKVVNSH
APGKKVWLGGVGPAWAGGTNNLSDTYAAGFLWLNTLGMAAMQGIDVVLRHSFFDYGYTHL
VDQHFNPLPDYWLSLVFKRLVGPRVLAVRVAGLQRKPRPGRVIRDKLRIYAHCTSFKNRN
YVRGSITIYIINLHRSRKKIKLAGTLRNMTVHQYLVQPYGTDGLHARSVQLNGERLLMVD
NETFPELKPRTLRAGRTIAMPPMTIGFYVIKNINAYACRK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatccggcgacatgccacttcccaggctcccggctgtggctggtatccgttgca
ctgatggtgcagtcggtgatctcctcttcttcgacctaccagagacctgcacccggcggc
ggggggaagagaacggggttcatggagaggacgctcattttgctggacgtcaacacccgc
agtccggttcaagttcttaacgacaacttcctctctttacagttggatccgtcgattata
aaggacgggtggctggactttctgagttccaagcgtttggtaaccctagcccgaggtctg
tccccagcctatctgaggttcggaggaaagagaaccgacttcctccacttccacaacctg
aagaaccttgccaagttcagaggccccggcccagattactacctaaaaaactatgaagat
gacatagtgcgtagtgacatcgccctggacaagcagaggggctgtaagctggccaaccac
cctgacatgatgctggagctgcaaagagagaaggcagctcagatgcagcttgtcctcctc
aaagaacagctctccaacctctacagcaacatcacaataacagccaggtctttagacaaa
ctgtacaactttgccgagtgtgctggtctgcatctggtccttgggctcaacgcccagcag
agaaaccctgactcctcctggaactcctcctcagcactcagcctcctcaaatacagcgcc
gggaagaaatacaacatctcctgggaactgggcaacgccaggtctttagacaaactgtac
aactttgccgagtgtgctggtctgcatctggtccttgggctcaacgcccagcagagaaac
cctgactcctcctggaactcctcctcagcactcagcctcctcaaatacagcgccgggaag
aaatacaacatctcctgggaactgggcaacgagcctaatggctaccgtagcatgatgggt
cagacagtgaacagtacccagctagcccaggactacaccctgctgagaacgttactgcag
tctgtacgctactatagccgagcacacctcttgggcccgaacgctggacgaccacgcaaa
aacgccattctgctgctcgatggattcatgaagaacgctggttctgttgtggatgctgta
acgtggcaacactactacatggatggcagagtgaccaaagtagaggactttctgaagacg
cgcctgctggacaccctgaccgaacagatcaccaaagtactcaaggtagtgaatagccat
gcacctggtaagaaggtgtggttggggggagtaggtccggcgtgggctggaggaaccaat
aacctctctgatacctatgctgctggctttctgtggctgaacactctgggcatggcagcg
atgcaggggattgatgttgtcctgcgacactcgttctttgactatggatacacacacctc
gtagaccagcactttaacccactaccggactactggttgtccctggtgttcaagcgtctg
gtcggtcccagggtgttggcagtgcgggtagcaggcttgcagaggaaaccacgaccaggg
agggttatacgagacaaactacggatctacgcacattgtaccagcttcaaaaatcgtaac
tacgtgagaggatccataacgatctatatcatcaacctgcatcggtcgaggaagaaaatc
aagctggcgggaaccttacgtaacatgactgtccatcagtacctggtacagccctatggg
acagacggacttcacgccaggtcagtccagttgaacggagaaaggttgttgatggtggac
aatgagacatttccggagttgaagcctcggacgctgcgggcgggaaggacaatagccatg
ccccctatgaccattggcttctatgtcatcaagaacatcaacgcttacgcctgccgcaaa
taa
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