Oncorhynchus tshawytscha (Chinook salmon): 112260993
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Entry
112260993 CDS
T05605
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112260993 (hps1)
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
112260993 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
112260993
NCBI-ProteinID:
XP_042181385
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Position
LG01:74873338..74895624
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AA seq
714 aa
AA seq
DB search
MKCLLIASESAEVLFYWTDPEFELNIQEQYGASQEEGEKPPAFEDSINTLFAPIIISCST
MVDRLGDSYTSFSTENNHTYVLHQFEECLYIAVNGDREEGEEDLKRKIYVMKKMIEVLFG
MVTLSSTLIRKELRPQDTEQRTNLWKYLQNLLETYSRLQEQDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQINSSVERAGEEVLHAFILVHTKLLAFYSSRNASTLTSSDLLALIVMV
QNMYPSNIDLEDTAPEDVENTSAPDIFYTPEPSPTNRDSGTDRDSVNSGRHEESRHEESR
HEESCHEESYHEESCHEESCHVGSGTPVFQFLDPDIQMAEDSLQTLEAPPPDPSNPSRVF
LEVTLKEGCYPMMPHSMYCLPLWPGITLVLLTKIPNSNLAMSVYVFLEAFAKLEKRLSEG
LEGSAARGQTSIQDLRNKLDKFIRALGTSDIQTSQLQSVWTEFKSRAFTRGGPGFSKDLV
PWCRTMKSQLCGVYRQCFITENTVGGGNPQRLSPSLQDRALTMVQEKLMDWKDFLLVKSK
RNITMVSYLEEFPGLIHFIYVDRTAGQMIAPSLNITDRATSELGKGPLAHFIKGKVWGLV
NTSRIYLQKGYSTVTLRDGDYFFCYFLWFENETGYKLEVKDLPILPNDSAPIGMLAWDYY
RKLLRYYSKSHQGEVVKCYELLTVHLGVIPTEYILQHCSQLARKLWEPSRIPLL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtctgctgatagccagcgagagcgctgaggtcctcttctattggacagaccca
gagtttgaactcaacatccaggagcagtatggcgcgtcacaggaagagggggagaagcca
ccagcatttgaggacagcatcaacactctgtttgcccccatcatcatctcctgcagtacc
atggtggacagactgggagacagctatacatcctttagtactgagaacaatcacacctat
gtgctacatcagtttgaggagtgtctgtacatcgctgtgaacggagacagagaagagggc
gaggaggatctgaagaggaagatttacgtgatgaagaagatgattgaggtcctcttcggc
atggttaccctcagcagcaccctgatcaggaaagagctgcgtcctcaggacacagagcag
aggaccaatctatggaaatatctacagaatctcctggagacctacagccgcctccaagag
caggaccagagctttttagtagaggcagtagagaggttgatccatcctactctatgtgaa
cagtgtatagagtttctggagcgtcgcttggtgcagcagatcaacagtagtgtggagaga
gcaggagaggaggtcctccatgcattcatactggtgcacaccaaactactagccttctat
tccagtcgtaacgctagtaccctcacctcgtctgacctgctggctcttatcgtcatggtg
cagaacatgtatcctagcaacatcgacctggaggatactgcccccgaggatgtggagaac
acctcagccccagatatattctacactccagagccttcccctactaatagggactctggg
actgacagggactctgttaattcaggcaggcatgaggagagcaggcatgaggagagcagg
catgaagagagctgtcatgaagagagctatcatgaagagagctgtcacgaagagagctgt
catgtggggagcggtactcctgtgttccagtttttggatccagacattcagatggcagag
gacagtctccagaccctggaagctcctccccctgacccctcaaaccctagcagagtcttc
ctagaggtcacgctgaaggagggctgctatcccatgatgcctcattccatgtactgtctg
ccactctggccgggcatcactctggtgctgctcactaagatacctaacagtaacctggcc
atgtcagtctatgtgttcctggaggcatttgctaagttggagaagcgtctgagtgaaggt
ctggaggggtcagcggcccgcggacagacgtccatacaggacctccgcaacaaactggac
aagttcattagggcattgggaacctcagacatacagacgtcccagctacagagtgtgtgg
acagagtttaagagccgcgcattcaccagaggaggacctggcttcagcaaggacctggtc
ccctggtgtcgtactatgaagagccagctgtgtggagtctacagacaatgtttcatcaca
gagaacacagttggaggagggaatccacagcgtctatcacccagtctacaggacagagct
ctcaccatggtgcaggagaagttgatggattggaaagacttcctgttggtgaagagtaag
agaaacatcaccatggtgtcgtaccttgaggagttcccgggcctgatccatttcatctac
gtcgaccgcaccgctggtcagatgatcgctccatctctcaacatcacggaccgcgcaacc
tctgagctaggaaaggggccactggctcacttcataaagggcaaggtatggggcctggtt
aatacatcgaggatttacctacagaagggttattccactgtcactctgagagatggagac
tacttcttctgctacttcctctggtttgaaaacgaaacgggctacaagctggaagtaaag
gacctgccaatactgcccaatgactccgcccccatcggaatgctggcctgggactactac
aggaagctgttgcgctactacagtaagagccaccagggggaggtggtgaagtgttatgag
ctgctgacagtccatctaggagtcatcccaacagagtacatactacaacactgtagtcaa
ttagcacgcaaactctgggagccctcacgtatacccctactgtag
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