Oncorhynchus tshawytscha (Chinook salmon): 112261015
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Entry
112261015 CDS
T05605
Name
(RefSeq) neurexin-2-like isoform X1
KO
K07377
neurexin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112261015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112261015
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112261015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
112261015
NCBI-ProteinID:
XP_042184385
LinkDB
All DBs
Position
LG10:complement(27817726..28753079)
Genome browser
AA seq
1679 aa
AA seq
DB search
MTRGLRFPAWPLAFLSLLVTTRALEFGGAPGQWARYGRWEAGSVGELSFSLKTNISKALV
LYLDDGGNCDFMELLIAGGRLQLRFAIHCAEPATLHMETRVNDDRWHMVLLTRNFRETLL
MVDGETKVAEVKSKRKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFLGLISNLKVGE
MPPTLLNSQGIQSDLEYLCTKQNPCFNGGFCSIQYGEVHCDCTHTRYKGKYCKEAEEYAV
EGLAHLTLSNQGDSSQGGKEESVATFKGNEFFCYDLSLTPIQSSTDEITLSFRTLQRNGL
MLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNTWHDVRVTRNLRQHA
GIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKD
VVYKNNDFKLELSRLAIERDPKISLNGDLVFRCEDVAALDPVTFESPESFIALPKWNTKK
TGSISFDFRTTEPSGLLLFSHGRPQGPKEQKPGRDMKSDYFAMELLDGFLYLLMDMGSGS
IKLKTSNKKVNDGEWCHVDFQREGRKGSISVNSRSIPFNSNEGSEILDLDSDMFLGGLPE
TRSDLVLPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSSPGVSSFCTRELQKRC
SSTPCGNGGLCKEGWNRYICDCTGTGYLGSNCELEATVLSYDGSMYLKIIIPGTMHTEAE
DVALRFMSQRAFGLLVATTSKESADTLRLELDGGRVKLTVNLDCIRIDCNLSKGPETLFA
GQKLNDNEWHMVKVVRRGKNFQLSVDNVTVEGQMTGAHTRLEFHNIETGIMTERRFISVV
PSNFIGHLQGLTVNGVPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTKASYLALATL
QAYASMHLFFQFKTTTSDGLLLFNSGDGSDFIVVELVKGYVHYVFDLGNGPSLMKGNSDK
PLNDNQWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVGKSMYNSLPK
LIASRDGYQGCLASVDLNGRLPDLIADALHRVGQVERGCDGPSTTCTEDSCYNQGVCLQQ
WEGFSCDCTMTSYGGSFCSDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFSTQLK
EAVLVRVESAEGLGDYLELHIERGRIGVIFNVGTDDIAIEESAVAVSDGKYHVVRFTRSG
GNATLQVDSQPVIERFPTGNFDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQAF
IKIGGGGGDKARHFQGQISGLYYNGLQVLKLAAEGDPNVQAKGNLRLVGDVPSVLTTDTT
STTPLADMSTTIMETTTTMATTTTRKQRSPTMRDSVTQNTDDLLVASAECPSDDEDLEEC
EPGNGGELVLPIITVDSLDPPSIVTRYPVIPPPPTYRPLLPFLETTKESLPLPNGRPPCP
LDQEDCEEAGPIEVSAYGSGEMTESDDEDYYKTPPRHRQDGPPPPPMKVASITPTTVTSP
TGPQLPPPPLSSTPTANPNQLGPRLNKPGGSSSKIPAGKMNTRDQVLLPPSNPSSDPDRH
RHVPGVTYPPNFPHVPTPDPTSPERGGPPGAVEVIRESSSTTGMVVGIVAAAALCILILL
YAMYKYRNRDEGSYQVDQSRNYISNSATQSNGTLVKEKQPGTAKTTTKNKKNKDKEYYV
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgacgagggggttgaggtttcccgcgtggcccctggcgttcctcagtctgctggtgacg
acccgggcgctggagttcggcggggcccccggccagtgggcacgctacgggcgttgggag
gcaggctcggtgggcgagctgagcttcagtctgaagaccaatatcagcaaggccctggtg
ctctacctggacgacggcggcaactgcgacttcatggagctgctgatcgccggtgggcgc
ctccagctgcgcttcgccatccactgcgctgaacccgccaccttacacatggaaacccgg
gtcaacgacgaccgctggcacatggtgctcctcacacgcaacttccgcgagaccctgctc
atggtggacggcgagaccaaggtggcggaggtcaagtccaagcggaaggagatggcggtg
gtcagtgacctgtttgtgggcggcatcccgcccgacgtgcgcctctcagcccttacgtcc
agcacggtgaagtacgagcccccattcctgggcctgatctccaacctgaaggtgggtgag
atgccccctaccctgctcaacagccagggcatccagagtgacctggagtatctgtgcacc
aagcagaacccctgcttcaacggaggcttctgctccatccagtatggcgaggtgcactgt
gactgcacacacacccgctacaagggaaagtactgcaaggaagcagaagagtatgctgtc
gaaggtctggcgcacctgacgttaagcaaccaaggtgactcatcgcagggcgggaaggaa
gagtcggtggccaccttcaaggggaacgagttcttctgctacgacctgtcgctgacgccc
atccagagcagcacggacgagatcacgctctccttccgcacgctgcagcgcaacggcctc
atgctgcacacgggcaagtcggccgactacgtcaacctgtcgctgaagagcggcgccgtg
tggctggtcatcaacttgggctcgggcgctttcgaggcactggtggagcccgtcaacggg
aagttcaacgacaacacctggcacgatgtgcgcgtcacccgcaacctgcgtcagcacgca
ggcattggacacgctatggtgactatatcagtggatggtattctgaccactactggttat
acccaggaggactataccatgttggggtcagatgacttcttctacattggggggagtccc
aatactgcggacctgcccggatcacctgtcagcaacaacttcatgggctgccttaaagat
gtggtgtataagaataacgacttcaagctagaactctcccggctggccatcgagcgggac
cctaagatcagcctgaacggagacctcgtcttccgctgtgaggacgtggccgccctggac
cccgtcacctttgagtcccccgagtccttcatcgccctgcccaagtggaacaccaagaaa
acaggctccatctccttcgacttccgcaccacagaacccagcggcctgctgctgttcagc
cacgggcgcccccagggtcctaaagagcagaagccgggtcgagacatgaagtcagactat
tttgctatggagctgctggacgggttcctatacctactcatggacatggggtcggggagt
atcaagctgaagaccagtaataagaaggtgaacgacggggagtggtgccatgtggacttc
cagagggaagggaggaaaggctccatctcggtgaacagccgcagcatccccttcaactcc
aacgagggcagtgagatcctggacctggacagcgacatgttcctggggggtctcccggag
acccgctctgacctggtgctgccccccgaggtctggacggccttgctcaactacggctac
gtgggctgcgtccgcgacctcttcatcgacggcaagagccgcgacgtgcgccgcctggcc
gagatccagagctccccgggcgtcagcagcttctgcacccgcgagcttcagaagaggtgc
agcagcaccccctgtgggaacggaggcctgtgtaaagagggatggaaccgctacatctgc
gactgtaccggcaccggctacctgggcagcaactgtgaactcgaggcaacggtgctgagc
tacgacggcagcatgtatctgaagatcatcatcccggggaccatgcacaccgaggcagag
gacgtggcgctgcggttcatgtcccaacgggcattcggtctcctcgtggccaccacctcc
aaagagtccgctgacaccctgaggctagagttggacggtggcagggtcaagctgactgtc
aatctagattgtatcaggatagactgtaacctcagtaaaggacctgaaacgctcttcgct
ggccagaagctcaacgacaacgagtggcacatggtgaaagtggtgcgccgaggaaagaac
ttccagctatctgtggacaacgtcacggtggaaggccagatgacgggtgcccacacgcgg
ctggagttccacaacattgagactggcatcatgaccgagcgtcgcttcatctctgtggtg
ccctccaacttcatcggtcacctccagggcctgacagtcaacggcgtgccctacctggat
cagtgcaagaacggtgacatatcctactgcgaactcaacgcccgctttggcatgcgccac
atcatcgccgatccggtgacgtttcgaacgaaggcaagctatctagcgttggctactttg
caggcctacgcctccatgcacctcttctttcagttcaagaccaccacgtcggatggcctg
ctgctcttcaactcgggggatggcagcgacttcatcgttgtggagctggtcaaaggctac
gtccattatgtctttgacctcggcaacggcccgtcgctgatgaagggtaactcggacaag
ccgctcaacgacaaccagtggcacaacgtggtggtctcccgggacgccaacaacgtgcac
acgctcaagatcgactcccgcaccgtcacccagcactccaatggagcccgcaacctggac
ctcaaaggggagctgtacatcgggggtgtggggaagagcatgtacaacagtctgcccaag
ctgatcgcgtcccgggacgggtatcagggctgcctggcctcggtggacctcaacgggaga
ctgccagacctgatcgcagacgccctccacagggtgggccaggtggagcgaggctgcgac
ggacctagcaccacctgtacggaggactcctgctacaatcagggcgtgtgtctccagcag
tgggagggcttctcctgcgactgcaccatgacgtcctatggaggctccttctgtagcgac
cctgggacaacctacatcttcgggagaggaggagccctcatcacatacacctggcccccc
aacgaccggccgagcacacgggcagaccggctggcggtgggattcagcacgcagctgaag
gaggccgtgctggtcagggtggaaagcgcagagggactgggagactacctggagctgcac
atagaacgaggaaggatcggcgtcatcttcaacgtgggaacggacgacatcgccatcgag
gagagtgcagtggcggtgagcgacggcaaataccacgtggtgcgcttcacgcgcagcggc
ggcaacgctaccctgcaggtggacagccagcccgtcatcgaacgcttccccacagggaac
tttgataatgaacgcctggctattgctagacaaagaatcccataccgacttggtcgggta
gttgacgagtggctactcgacaaaggtcgacagttgaccatcttcaacagccaggcgttc
atcaagatcggtggtggtggtggcgacaaggcccgtcacttccagggccagatctcgggc
ctctactacaacgggctgcaggtgctcaagctggcggccgagggcgaccccaacgtgcag
gccaagggcaacctgcggctggtgggcgacgtgccctcggtgctcactacggacaccacc
agcaccacgccgctggctgacatgtccaccaccatcatggagacaaccacgaccatggct
accaccaccacccgcaagcagcgttcacccaccatgagggacagtgtcacacagaacacg
gatgatctgttggtagcatctgctgagtgtcccagcgatgacgaggacttggaggagtgc
gagcctggaaatggaggtgaattagtgttgcccataataacggtggactccctagacccc
ccatccatcgtcacccgctaccctgtaatccccccgccccccacctaccggcccctccta
cccttcctcgaaacgaccaaagagtccctccccctgcccaacggtcgccccccctgccca
ctggaccaggaggactgcgaggaggcgggacccatcgaggtgtccgcctacggctcgggt
gagatgaccgagtcggacgacgaggactattacaaaactccccctcgtcaccgacaggac
ggtcctccccctcccccaatgaaagtggcatccataacccccacgaccgtcacttctccc
accggcccccaactcccaccgccccctctgtcctccacccccacagccaaccccaaccag
ctaggccccaggctcaacaagcctggcggcagcagcagcaaaatccccgctggcaagatg
aacacccgggaccaggtgctgctgccgccctccaacccctcctcagaccctgaccgccac
cgccacgtcccaggcgtaacctaccctcccaatttcccccatgtgcccaccccagacccc
acctccccagagagaggagggcctcccggcgcagtagaggtaatcagggagtccagcagc
accacgggcatggtggtaggcatcgtggcggccgctgccctctgcatcctcatcctgctc
tacgccatgtataagtaccgtaaccgggacgagggatcctaccaggtagaccagagccga
aactacatcagtaactcggccacgcagagcaacggcaccctggtgaaggagaaacagccg
ggcacagccaagacaaccaccaagaacaagaagaacaaagacaaggagtactacgtctga
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