Oncorhynchus tshawytscha (Chinook salmon): 112261034
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Entry
112261034 CDS
T05605
Name
(RefSeq) caskin-2-like isoform X1
KO
K21952
CASK-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112261034
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
112261034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
Caskin-Pro-rich
SAM_2
Ank_5
Caskin-tail
Ank_3
Caskin1-CID
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
112261034
NCBI-ProteinID:
XP_042181912
LinkDB
All DBs
Position
LG01:complement(78278903..78362965)
Genome browser
AA seq
1513 aa
AA seq
DB search
MGKEQDFLVAVKSGDILLAHKLLAKVKCNKTKLLSSTKRLNINYQDSDGFSALHHAALTG
TTELLSLLLEGQATVDIKDTNGMRPLHYAAWQGKADSVLLLLRAGASVNTPSQDGQIPLH
LSAQYGHYQVSEMLLQHQSNPCLLNKANKTPLDLACEFGRLKVAQLLLSSNMVVALLEGE
GLDFTSSNTPLHLAARNGHKDIIRLLLKAGIDINRATKAGTSLHEAALYGKTEVVHLLLD
AGIDVNLCNTYNQTALDNVNQFTTTSASKDIKILLREALGSLQVRAVKDYWNLHDPTALN
LRAGDLIMVLEQHMDGRWKGYIHDNQRGTDRIGYFPPSVVEVISRRAGGTLSRQVSLPSQ
RQQHFLSRAPPTSIGSTPQTDDSYTLYYDHAGTCTPGSLLSAPASPASPSEDIWVLRNSH
TAGDRNSVGSAGSSAGSVGSSRSAGSGQSSENSFGQNGSHTRQTAATLGSYMATLAPSAG
ESEQQFRSVGPVHSKQPDGSTGGPRHQVSGGTRSGEQGGFMRPDQLLEGRDSEAIYQWLC
EFQLESYTANFLTTGYDVPTISRMTPEDLTAIGVTKPGHRKKISMEIGNLNIPEWLPDYI
PSELSEWLSAIGLPQYQKRLCENGYDTISIIKDITWEDLSEIGITKLGHQKKLMLAVKRL
CDLHRSRHHANGSGTLRCSKPLTALELVAIEPPEPPADCCPPSPHTPRTPLLSFQDSELS
TELQNAMMGRAGGVGIGGFGMCVRGVVRGVVSPMSLSQESIGTRSRGSGNSGNFSGCSQE
LHQHTLASAGVYSRSDESLGGVGGRWARQGGGGSPERDRQRPTELWSDQLYQPPTKLPIT
PITPPLTPSKMPRFAYPAVPSKPKPCQSPAHPHRPSFSPQASPTQRTFSYLHTQGGGPDL
GPRGLPKPHAGAVPLPGLGLNTEALKGPKKRTQSLTHYSLSDGEPEDDELSAQESVPPVT
MPSYATLGRKPGRQSSAVQRHISRSHTFAVRSRRKGPPPPPPKRLSSVSGSQANESGAAV
VSVEVPGVETESAGSVRSIAARLQGSGHRGSPSKGVELPSPRTSTLASHKPVPALGLEGL
RRMGSERRDRDGGIERIPEEGGERGRKSGSVLESSTSLQRSSSENLPFAEEGNLTIKQRP
RLGAGCRAEPEIQPQASLQDPKMQPPKSLEIPEFNLKESDTVKRRRQPKDRDTHTLDEIF
TPSEDDAHTQPHTHSRSNGFHTHPNRDIKSEEEAGVRSERSLQRVGSTGKCQKPPLSSKP
TSTPLKPAGQQIHTTTSKPGSQQIHTTTSKPGSQQKTAPTSKLGSTHNHITTPIPAIQQI
HTTSSRPASQQTRATIHIPASPQNTRTTNSIPINPQKLVTAAKPASPQKTITSKPVNHQT
PATVSRLPQRSTSITSAPTARSPGVTLNVVQSVVFTSPAQAAPVSSYRTLGPPGQAGRAV
KAQDGKACSEVLVQRRLDETSTSLEEALKDVERKLAQDDTDGGSGTVKAAGNILDDIGNM
FGDLADQLDAMLD
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaacaggacttcctggtggcagtgaagagtggagacatcctcctggcacac
aaacttctggctaaagttaaatgcaacaaaaccaagttgctgagttccacaaagaggctg
aacatcaactatcaggactcagatgggttttcagcgttacaccatgcagctctaacgggc
accactgaacttctgtctctactactggagggtcaagcaactgtggacatcaaagacacc
aatggtatgcgtccgctccactatgcagcgtggcagggtaaagctgactctgtgttgcta
ctactaagagctggagcatcagttaacacaccgtcacaagacggacagatacctctacac
ctgtctgcacagtatggacactaccaggtgtctgagatgttactccagcaccagtctaat
ccatgtctgttgaacaaagccaacaagacccctctggacctggcctgcgagtttggcaga
ctcaaggtggctcagttgttattgagcagtaacatggtggtagctctgttggagggggag
ggtctagactttacctcctccaacacaccccttcacctggccgctcgcaatggacacaaa
gacatcatcaggttgctactgaaggctggtatagacatcaacagagccactaaggctggg
acctctctgcacgaggctgccctctatggcaaaacggaagtagtgcacctgctgctggac
gctggtattgatgtaaacctatgtaacacgtacaaccagacagctctggacaacgttaac
cagttcaccaccacatcagccagcaaggacatcaagatactattgcgagaagcattaggg
tctctccaggtgagagcggtgaaggactactggaaccttcatgaccctacagccctcaac
cttcgagcaggagacctcattatggtgttggagcagcacatggacggaaggtggaaaggt
tatattcatgacaaccagagaggaacggaccggattggatacttccctccgtctgtagtg
gaggtcatcagcaggagagcagggggtactctctcacgtcaggtctcgttgccaagccaa
cggcagcagcacttcctgtccagagctcctcccaccagtattggctctaccccccagact
gatgactcctacaccttgtactacgaccacgcaggtacctgtacacctggcagtctcctt
tcagccccagctagtccagctagccccagtgaggacatatgggtcctcaggaactctcac
actgcaggagacaggaacagtgttggcagtgcaggcagcagtgcaggtagtgtaggcagc
agtcgtagtgctggcagcgggcagagctccgagaacagttttggacagaacgggtcacac
actcgccaaacagcagccacattgggttcctacatggccacgctggctccctctgctggt
gaatcagaacagcagtttcgctcagtaggaccagtccacagcaaacaacctgatggatct
acaggtggtccgcgtcatcaggtcagcggtggtactcggtcaggggagcagggtggcttc
atgcgtccagatcagctcctggagggcagggactctgaggccatctaccaatggctgtgt
gagttccagctggagagctacactgctaacttccttacaacaggatacgatgtgcctact
atcagtaggatgaccccagaggacctgaccgctatcggtgtgaccaagccaggccaccgt
aagaagatctccatggagataggcaacctaaacatcccagaatggctacctgactacatc
ccttctgagctgtcagagtggttgagtgcgattggtctccctcagtaccagaaaagactg
tgtgagaacggttatgacaccatcagcatcatcaaggatatcacatgggaagacttatca
gagataggaatcactaaactgggtcatcagaagaagctgatgttagccgtgaagcgttta
tgcgacctgcatcgttcccgtcaccatgccaatggctccggcacgctacggtgtagtaaa
cccctcacggctctggagctggtggctatcgagccccccgagccccctgccgactgctgc
cccccatccccccacactcccaggacacccctcctttcctttcaggacagcgagctgagc
acagagctacaaaacgccatgatgggcagggcaggaggagtggggataggggggtttggg
atgtgtgtgagaggtgtggtgaggggtgtggtgtcgccgatgtcgctcagccaggagagc
attggaacgcgttcccgcggatctgggaattctgggaatttttcgggatgttcccaagag
cttcaccaacacactctggcatcggctggagtgtacagtcgctcggacgagagcctgggg
ggagtgggaggaagatgggcgagacaggggggaggagggagtccagagagagacaggcag
agacccacagagttgtggtcagaccagctgtaccagccccccactaaactaccaatcacc
cccatcacccctcctctcacccccagcaagatgccccgcttcgcctacccagccgtgccc
agtaaacccaaaccctgccagtcccctgcccacccccatcgcccctccttctctccccag
gcctcccccacacagaggaccttcagttacctccacacccagggaggaggtcccgatctg
ggcccgcgtggtctacccaagccccatgctggagctgtccccctcccaggactaggcctc
aacacagaggcccttaagggccctaagaaacgcacccagagtctgacacactattctctg
tcagatggagaaccggaagacgacgagttatcggcgcaagaatccgttcccccggtgacc
atgccctcgtacgccacactaggacgcaaaccaggccgccaatcctccgccgtccaacgc
cacatcagccggagccacacattcgctgtgcgctctcgccgcaaaggcccacccccacca
ccacctaagaggttgagctcggtgagtggcagccaggccaacgaatcaggagcagcagta
gtgtcagtggaggtgccaggggtggagactgagagtgcaggcagtgtgaggagcattgca
gccaggctacaggggtccgggcacaggggcagtccctctaagggggtagaattaccctcc
ccacgcacctccaccctcgcctcccacaaacctgtacccgctctggggctggaaggcctg
aggaggatggggagcgagcggagggatagagatggagggatagagagaatcccagaagag
gggggagagagagggaggaagagtggttcagtattggaaagctctacgtcacttcagagg
agctccagtgagaacctccctttcgcggaggagggcaacctcaccatcaaacagcggccc
aggttgggagcaggttgccgggcagagcctgaaatccaaccccaggcttctctacaagac
ccaaagatgcagcccccaaagtccctggagatcccagagttcaacctcaaagagtcggac
acggtcaaacggcggcgtcagcccaaagaccgggacacacacacactggacgagatcttc
acccccagcgaagatgacgcacacacacagccgcacacacacagccggtccaacggcttc
cacacacacccaaacagagacataaagagtgaggaggaagcaggtgtgaggtcagagcgc
agtttacagagagtaggatcgacagggaaatgtcagaaaccacctctgtcctccaaacca
accagcactcccctcaaaccagctggtcaacagatacacacaactacatctaaaccagga
agtcaacagatacacacaactacatctaaaccaggcagtcaacagaagacagcaccaacg
tccaaattaggtagcacacacaaccatataaccactcctataccagccattcaacaaata
cacacaacttcatcaagaccagccagtcaacagacacgggcaactatccatataccagcc
agcccacaaaatacacgcacaaccaactctataccgatcaatccacagaaactagtaaca
gcagccaaaccagccagtccacagaaaacaataacatccaagccagtaaatcaccagacg
cctgctactgtctctagacttccccagcgcagcacatccataacgtcagcccctacagcc
cgttcccctggtgtgactctcaatgtggtccagagtgtggttttcacttccccagcccag
gcagcccccgtttcatcctaccgcaccttagggcctccaggccaggcagggcgagcagta
aaggcccaggatggtaaggcctgctcggaggtactggttcagaggaggctggatgagacc
agcacgtcactcgaggaagctctgaaagatgtagagaggaaactggctcaggacgacact
gacggtggcagcggcacagtgaaagcagcagggaatattctggatgacatcggcaacatg
tttggtgacctcgctgaccagctggatgccatgttggattaa
DBGET
integrated database retrieval system
