Oncorhynchus tshawytscha (Chinook salmon): 112261109
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Entry
112261109 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RNF152
KO
K15705
E3 ubiquitin-protein ligase RNF152 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
112261109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112261109
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112261109
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112261109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF152_C
zf-RING_5
zf-C3HC4
zf-RING_2
zf-RING_10
zf-RING_4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
112261109
NCBI-ProteinID:
XP_024292218
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Position
LG10:57038161..57039860
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AA seq
199 aa
AA seq
DB search
MEPDMDLTKYNTTVKRRGGETKSRKYLPKLLDCQHTCCSVCLTQMKMSLSELRCPWCRSV
TTLPPGVSVSQLPDDPDIMAVISVPSPPEYTPVFFKQLLSNTCYLSIDHQERATVSGEHS
GRHLQAGQTKEMFPVPVSDEGSPGLGEEHVESEQGCCKSSFTTRAGLVVLLGFVLLLLVY
IVLYNMKCIYKRFTMISCA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggagccagacatggatttaactaagtacaacacaactgtaaagaggaggggaggcgag
accaagagcaggaaatatctgcccaagctcttggactgccaacacacctgctgctctgtg
tgcttgacccagatgaagatgagcctgagtgagctgcgctgcccctggtgtcgctctgtc
accaccctgccacctggggtctccgtctcccagctcccagatgaccccgacattatggcc
gtcatctctgtcccatcccccccagaatacacacctgtcttcttcaaacagctgcttagt
aacacctgctacctgtctatagaccaccaagagagggctacagtgtctggtgaacattca
ggtaggcacctgcaggctgggcagacaaaggagatgtttccagtgcctgtgtctgacgag
ggaagcccagggttgggggaggaacatgtggagagcgagcaaggttgttgtaagagctcg
ttcacgaccagggcaggcttagtggttcttctgggttttgtcctactcttacttgtatac
attgtactgtacaacatgaaatgcatttacaaacggttcaccatgatatcctgtgcctaa
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