Oncorhynchus tshawytscha (Chinook salmon): 112261126
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Entry
112261126 CDS
T05605
Symbol
snx5
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112261126 (snx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112261126 (snx5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112261126 (snx5)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Macropinocytosis
Sorting nexins
112261126 (snx5)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112261126 (snx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Glutaredoxin2_C
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
112261126
NCBI-ProteinID:
XP_042182558
LinkDB
All DBs
Position
LG01:complement(82720484..82735566)
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AA seq
399 aa
AA seq
DB search
MTSTLDDSEREKARSVSVDLNNDASLLIDIPDALCERDKVKFTVHTKTTLSSFQKPDFSV
PRQHEDFIWLHDALVETEDYAGLIIPPAPPKPDFESPREKMHKLGEGEATMTKEEYTKMK
QELEAEYLAVFKKTVQVHEVFLQRLSSHPILSKDRNFQIFLEYDQDLSVRRKNAKETFGS
FFKNMVKSADEVIISGIKEVDDFFEQEKTFLLDYSSKIKDSTARAEKMTRSHKNVADDYI
HISATLNSLSVDDNTALKKHLEKFADLFEKLRKVEGRVASDEELKLTELLRYYMLDIQAA
KDLLYRRARALADYENSNKALDKARLKSKDITQAEEHQQQCLQKFDKLSESGKRELTSFK
GRRVVAFRKNLIEMAELEIKHAKNNMALLQGCIELLKSN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacatctactcttgatgatagcgaaagagaaaaggcacgctctgtgtctgtggacctt
aacaatgacgcttctctcctcatcgacattcctgatgcactctgtgaacgtgacaaagtc
aagttcactgtccacaccaagaccaccctgagctccttccagaagccagacttctctgtt
cctaggcaacatgaggactttatctggctccatgacgcgctggttgagactgaggactac
gctgggctcattatccctccagcccccccgaagccagacttcgagagcccaagggagaag
atgcataaactgggagagggagaagccaccatgaccaaggaggaatacaccaagatgaag
caggagttagaggctgagtacctggctgtatttaagaagactgtacaagtccacgaggta
ttcctgcagcgactatcttctcacccgatcctgagcaaggacagaaacttccagatattc
ctggagtatgaccaggatctgagtgtacgaaggaagaacgccaaggagacgtttgggagt
ttctttaagaacatggtcaagagtgctgacgaggtcatcatctctgggataaaggaagta
gatgatttctttgagcaggagaagaccttcctgcttgattattcgtccaagatcaaagac
tccactgccagggcagagaagatgacccgctctcacaaaaatgttgctgatgattacatc
cacatctctgccactttgaacagtctctctgttgatgacaacaccgcacttaaaaagcac
cttgagaagtttgcagacctgtttgagaaactaaggaaagtggagggcagagtggcatca
gacgaggagctgaagctcacggagctgctccgttactacatgctggacatccaggcagcc
aaggacctgttgtacaggcgggcccgggccctggctgactatgagaacagtaacaaggcc
ttggacaaggcccggctgaagagtaaagacatcacccaggctgaggagcaccaacaacag
tgtctgcagaagtttgacaagctctctgagtctggaaaaagagagctgaccagttttaag
ggcaggagagtggtggctttccgtaagaacctaatagagatggctgaactggagatcaaa
cacgccaagaacaacatggctctgctgcagggctgcattgagcttctcaagagcaactga
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