Oncorhynchus tshawytscha (Chinook salmon): 112261279
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Entry
112261279 CDS
T05605
Name
(RefSeq) zinc finger protein 827-like isoform X1
KO
K27104
zinc finger protein 827
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112261279
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112261279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-H2C2_5
zf-Di19
zf-C2H2_6
zf-C2H2_5
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
112261279
NCBI-ProteinID:
XP_042185595
LinkDB
All DBs
Position
LG11:complement(979828..1084177)
Genome browser
AA seq
1526 aa
AA seq
DB search
MPRRKQEQPKRLPSHVDSVEEGGPDRVCCPVEDDGGIGGWYGNASDTRSESSYSGDIHDD
HELFLHGGSPPTPSPDRPPEHPDTSTESSLGGCPTPVHSHQHHRASLELLSLGVDGGVFS
AQDTLSSVVSSLYGEAASEALGKPLSSNLRRLLEAGSLKLDGELLGRVRGGGGESPPIGL
APALTLSPSSHHAQQLSALARKLAANNNNNNSGGSASASPTSVAMSSTAIKQEPCDPFTS
VVTPSNGAGFVWVGVAGDGKWPPAGCGGSSLSPDSAIQKLKAAANAVLQDKNATVVASST
SSSSSSCSTVPTLGGGSRGGTDDSVRFDAFTSPFSPQSASSTLAALSKKVSERSQTTSTS
SSDHQHQPSTGSSFLSLVSMTSSAALLKEVAARAAGNLLADKMEAPAGGGAIQEDIKPLL
DRNQKAGTPTGPLSTMDLLLPSTPKGRAKPSSQAGSPGEDGGKPFQCPVCGLVIKRKSYW
KRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCELCPFTSSRHFSLK
LHMRCHQHFPRSGSASDGVKVKEEATTDTEGEGSLLGDFNPGESPLQSDAGNQSSPGVSN
HHVYIKEEPQERELSVLSPFTLCRDRERERPGSSGNSLDLSMGGVGLGVGVRASPGGGPT
AASLFSPDITTKTATDLLMKLSAANQKEALKAPQSFHLKQEPRAEEEEVRRSPRSQPSYS
SFYQEQGAALGATGPAEVTADSGGHRGTRKGREGSPMGNKNSLLSQDINFKVASELLMKL
SESNKDAAHYQKVMVKAEPMEVDPTSGPAPPSSHLLAFSTLGPCEKSEPMVSLPEALSRP
QKQDLFSQDISVKMASELLFQLSEKVSKANDHKDSNMVGISSPFLDERFRQSPFSQRSKS
SSPAEASSSARTALHDPEKDTGEPGGNGISQGILSSQQLYPCPVCGKVFGRQQTLSRHLS
LHTEERKYTCHLCPYAAKCRANLNQHLTIHSVKLVSTDAEQMVSAVATAEGRDGKTFPYY
YSCHACGFQTGLNAQFVSHMSLHVDKEQWMFALCCSACDYVCVEESDMKSHVSHGHTGLN
SRSPLSETKSTSSSLSALSDSLNSSEGGELTHANEELKNLLAPPSSAGSQSSSSSHSGSG
TEEKSEKGFECVFCNFVCKTRTMYERHLQIHLITRMFECDVCHKFLKTPEQLLEHKKCHT
VPTGGLKCPVCIYSTNRPVAMECHLKTHYKMEYKCRICQSVWCDQPALERHMREHRLGNH
YKCEQCGYLSKTANKLIEHVRVHTGERPFHCDRCGYSCKRKDNLNLHKKLKHAPRQTFGC
TECPFTTTHPFIFSRHLKKHQGGGEGEEAGEEEFQAQLGGSLVGSLRGGEPFLLGVGGGG
SSGGSGSSSPLMILSASQALQSVALSLITGKQHHRQQELPPPAQRYLTATTTNGGGPSLF
FPSPRHVYEQLGNCERAHLIPLTTLFTHRHRSTFHSPLSRLQRPPSSAPLFLSSTASSPS
PPSPTSLKHSFLAYLGLGLTERAKTV
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaagcaggagcaacccaaacgcctgccttcacatgtggacagcgtcgag
gagggtgggcccgacagggtctgctgtcccgtggaggacgacggcggcattggcggctgg
tacgggaacgcctccgacacgcgctccgagtcgtcgtacagcggcgacatccatgacgac
catgagctgttcctccacgggggctccccccccaccccctccccagaccgacctccagaa
caccccgacacctcaaccgagagctccctggggggctgccctacgcctgtccacagccac
caacaccaccgggcctctcttgagctcctgagcctaggggtggacggaggggtgttctct
gcccaagataccctttcctccgtggtatcctcgctctatggagaggctgcctccgaggcc
ctggggaaacccctgagtagtaacctgcggcgcctcctagaggctgggtcgttgaagctg
gatggggaacttctggggagagtgagaggagggggaggagagtcaccccctataggctta
gctccagccctgaccctctccccctcctcccatcatgctcagcagctaagtgccctcgcc
cgaaaactggcggccaataacaacaacaacaacagtggaggctccgcctcggcctcaccc
acctctgttgccatgtcgtccaccgccatcaagcaggagccctgcgaccccttcacctcg
gtagtcaccccgagcaatggcgctggcttcgtgtgggtgggagtggccggtgacgggaag
tggcccccggcgggttgcggcgggtccagcctatcaccggactcggccatccagaagctg
aaagcggcagccaacgcggttttacaggacaagaacgccaccgtagtggcctcgtctact
tcctcttcatcatcctcctgctctaccgtacccaccctgggaggagggagccggggagga
acagacgactcggtacgcttcgatgccttcacctcccccttcagccctcagtcggccagc
tccacgcttgccgccctttccaagaaggtgagcgagcgctcccagaccacctccacctcc
tcatcagaccaccaacaccaaccctccaccggctcctccttcctctccctggtctctatg
acttcctcggctgcgctcctcaaggaggtggcagcccgggcagcagggaacctccttgct
gataagatggaggccccagcaggaggaggggccatccaggaggacatcaagcccctgctg
gacaggaaccagaaggcagggacccccacagggcccttgagcaccatggacctgctgctg
ccctccacccctaagggaagggccaaacccagcagccaagcaggttccccgggggaggac
ggagggaagccgttccagtgtccggtgtgtggcctggtcatcaagaggaagagctactgg
aagagacacatggtgatccacaccggcctgaagagtcaccagtgtcccctgtgccccttc
cgctgcgcccgcaaagacaatctcaagtcccacatgaaggtccaccagcatcaggaccgg
ggcgagacgttccagtgcgaactttgccctttcacctcctcgcgccacttcagcctcaag
ctccacatgcgctgccaccagcacttcccccgctctgggtccgcctccgacggggtcaag
gtcaaggaagaggccaccacggacacggagggcgaggggtcactcctgggcgatttcaac
cccggggaatcccccctccagtcggacgcagggaaccagagctcccctggagtctccaac
caccacgtctatataaaagaagagccccaggagagggagctgtcagtgctgtcgcccttc
accctttgcagggacagggagcgggagcggcctggtagcagtggcaactccctggacctc
tctatggggggagtcggcttgggggtgggggtgcgggccagtcctggtggaggtccaacg
gcagcgtccctcttcagcccggacatcaccaccaagacagccaccgacctgctcatgaag
ctctcagcggccaaccagaaggaagccctgaaggctccacagtccttccatttgaagcag
gaaccccgggcagaggaagaagaggtgcggaggagcccccggagccagcccagctactcc
tccttctaccaggagcagggcgcggcactgggggccacagggccagcagaggtcacagca
gacagtgggggccacagggggacacgaaagggacgggagggaagccccatgggaaacaag
aacagtctcctcagccaggacatcaacttcaaggtggcgtcggagctgctgatgaagcta
tcagaaagcaacaaggacgccgcccactaccagaaggtgatggtgaaggcggagcctatg
gaggtggacccgaccagcggcccagccccgccctcttctcacctgctggccttcagcact
ttagggccgtgtgagaagagcgagccaatggtcagcctccctgaggcgttgtcccgcccc
cagaagcaagacctcttctctcaggacatatcggtgaaaatggcctccgagctcctcttc
caactctcagaaaaagtcagcaaagccaacgaccacaaagacagcaacatggtgggcata
agcagccccttcctggacgagcgtttcagacaatcccccttcagccagcgctccaagtcc
tcctcccccgcagaggccagctcctctgctaggacagccctccacgacccagagaaggac
accggagagccgggggggaacgggatatcccaggggatactgagcagtcagcagctctac
ccctgtcctgtctgtggcaaggtgtttggcagacagcagaccctgtccagacacctgtct
ctacacacagaggagcggaagtatacgtgtcacctgtgtccttatgcagccaagtgcaga
gccaacctcaaccagcacctgaccatccactctgtcaagctggtcagcaccgacgcagag
cagatggtcagcgccgtcgccaccgctgagggacgagacgggaagaccttcccctattac
tacagctgccatgcgtgtggtttccagacggggctgaatgcccagttcgtcagccacatg
tctctccacgtggacaaggagcagtggatgttcgctctgtgctgcagcgcctgtgactac
gtctgtgtggaggagagtgacatgaagtcccacgtcagtcacggacacacaggtctgaac
tcgcggagccccctcagtgagacgaagagcacctcctcctccctgtcggccctcagcgat
tcgctgaacagctcagagggtggagaacttacccatgccaatgaggagctcaagaacctg
ctggcccctccctcctctgcaggcagccaatccagctccagcagccactcgggatcagga
actgaagagaagtctgagaaaggcttcgagtgcgtcttctgcaactttgtgtgcaagacg
cggaccatgtacgagcgccacctccagatccacctgatcacgcgcatgttcgagtgcgac
gtgtgccacaagttcctgaagacccccgagcagctgctggagcacaagaagtgccacacc
gtccccaccggagggctcaagtgccccgtctgcatttattccaccaatcgaccggtggcc
atggagtgccacctgaagacccattacaagatggagtacaagtgtcgcatctgccagtcg
gtgtggtgcgaccagcccgcgctggagaggcacatgcgcgagcatcgcctcggcaaccac
tacaagtgtgagcagtgcggctacctgtccaagacggccaacaagctgatcgagcacgtg
cgcgtgcacacgggcgagcggcccttccactgcgaccgctgcggctacagctgcaagcgc
aaggacaacctgaacctgcacaagaagctaaagcacgccccgcgccagaccttcggctgc
acggagtgccccttcaccaccacccaccccttcatcttcagccgccacctcaagaagcac
cagggtggaggggaaggggaggaggccggcgaggaggagttccaggcccagctagggggc
tctctggtggggtctctgcggggcggggagcccttcctcctgggggtaggtggaggtggg
agtagcggggggagcggtagcagcagccccctcatgattctctctgcctcccaggccctg
cagtctgtcgccctgtcactcatcacagggaaacaacaccaccgtcaacaggagctcccg
cccccagcccagcgttacctgacagcgaccacaaccaatggcggaggcccctccctcttc
ttcccctccccacgccatgtctacgagcagttgggaaactgcgagcgggcgcacctgatc
cccctcacaaccctgttcacccaccgccaccgctccacattccactcgcccctctccaga
ctccagaggccgccctcctccgccccccttttcctctcctccaccgcctcctccccctct
cctccctcgcccacctcactcaaacactccttcctggcttacctaggactgggactgacg
gagagagccaagactgtgtga
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integrated database retrieval system
