Oncorhynchus tshawytscha (Chinook salmon): 112261388
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Entry
112261388 CDS
T05605
Name
(RefSeq) PDZ and LIM domain protein 3
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112261388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112261388
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
112261388
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112261388
NCBI-ProteinID:
XP_024292439
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Position
LG11:complement(7870781..7896168)
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AA seq
315 aa
AA seq
DB search
MTLDVVLNGLAPWGFRLTGGKDFNQPLTISRITPGSKAAVANLCPGDVILAIEGIPAEDM
MHCEAQNKIKDAIYQLILTVQRPETRLWSPQVTEGGKANPFKINLEAEQQEFKPIGTGHN
RKAQPFIAAANIDDHRQVVSTAYNTPIGLYSSGNIQDAMHGQMRGLVQDKPEGSKTLTSI
EESDVYRMLLKDQEEPQEPRQSGSFKALQDFVDSDGTRPMVTRTVRAPMTKPPQPTGNLQ
KLPLCDKCGNGIVGTVVKARDKFRHPSCFVCTDCDVNLKQKGYFFVEGQLYCETHARART
RPPEGHDLVTVFPSA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacactggatgttgtcctaaatggcctggccccgtgggggttccgactgactggcgga
aaggacttcaaccagcccctcaccatctccaggatcactccgggcagtaaggcggcggtg
gccaacctgtgtcctggtgatgtcatcctggccatcgagggcatcccggcggaggacatg
atgcactgtgaggcccagaacaagatcaaagacgccatctaccagctcattctcaccgtc
cagagaccagaaaccaggctatggtcgcctcaagtcacggaaggcgggaaagccaacccg
ttcaaaatcaacttggaggctgagcaacaggagttcaaacccattggtacgggtcacaac
cgcaaggcccagccctttatagctgcagctaacatcgacgaccatcgtcaggtggtgagc
acagcctacaacacccccataggcctctactcctcaggcaacatccaggatgccatgcac
ggacagatgaggggcctggtccaggacaagccagagggtagcaagacgctgacctccatc
gaggagtctgatgtgtaccgcatgctcctgaaagaccaggaggagccccaggagccccgg
caatcaggttccttcaaggccctgcaggactttgtcgacagcgacggcactcgccccatg
gtgacgaggacagtgagagcgcccatgactaagccaccgcagcccacaggaaacctgcag
aaactgcccctgtgtgacaagtgtggaaatggcattgtgggcacagtggtgaaagcgaga
gacaagttccgccaccctagctgcttcgtgtgcaccgactgtgacgtcaaccttaaacag
aagggctacttcttcgtggagggccaactgtactgcgagacccacgctcgagcccgaaca
agacccccggagggccatgaccttgtcactgttttcccctcggcatag
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