Oncorhynchus tshawytscha (Chinook salmon): 112261406
Help
Entry
112261406 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 27-like isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112261406
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112261406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
WW
PH
SH3_1
SH3_9
PH_9
Motif
Other DBs
NCBI-GeneID:
112261406
NCBI-ProteinID:
XP_042183073
LinkDB
All DBs
Position
LG01:complement(89249539..89299151)
Genome browser
AA seq
969 aa
AA seq
DB search
MAMVQVQFEYEYTAKDGALVSIKPNERYILVSRTNDYWWHVRKDQRTKPFYIPAKYVREL
SVKTQGPLDLTNSGTQSRTFLLSTTDREPLDMSNKGQWSGAVTKVHMSMDHSARATTLRM
STFGVSLDIDDIKHYEHMKTMVGLQTSNNETRDIKPHDLKRRSLAPGFSFTSASDAQGLG
DMLQHCSLKLHVSPEPTSRLPQLTDFVGTELAGSLGSTETPAEQQQSLDRTSGPIDITAP
SPTAQVKESVQNAVYVNVAELGRNISESPPSAFSPPCTLPYLDSKGWEVHTDQESGREYY
YHPESGQTTWDNPHIDPEAPAEVSVCSPSSQFPSLSPTSASPPAWTSDWEQCLDVTSGRQ
YFYNPGETSWESPEPQCPYPALMEPLSGLRSLEEGPPPLPEDDYPADNYLAEVDLPEEEL
LAVSPVTPHSFPKDYTPSHVTRAVIPRASLDRSAPTGWNLNIDPDGTWVFSNRHSPDQWI
KSLDDRGLAYYYLRDGSRSQWNLPEAPVVSGQSKVGNGVELDGVSLTVMKNWRHTMGATY
VSSALQEVFSPTHRRNASDYGSCVNNSPEMGQHHVQSLEKVGILNKTKVSENGKRVRKNW
AQSWTVLHGGVLTFHKEPKSAAMGASIKTNQIVPEVTVDLRGAKIGWALRDKSSKKNVVE
LKDRNGVEFLLQYDTESIINDWHKVLMDTIRQLDQEHHQSEEEDGDISEKSYSTDRDQRS
PGTMDRRRRSSRPSTATSSGGETEQKKVRTKLMKFLLKRPTLQFVKEKGYIRDNVFCCHL
AALCAQEKTTIPSFVEKCIRAVEKRGLDMDGLYRVSGNLAVIQKLRFKADHEELDLEDGQ
WEDIHVITGALKLFFRELPEPLFPFSHFSCFIQAIRTVDYHHKVSYMQELVESLPRPNHD
TMELLFSHLRKVIEYGEENRMTVQNVAIVFGPTLLRPEMESANIAMHMVFQNQIVELILN
QYEYIFHSS
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggtgcaggtgcagtttgagtatgagtacacagccaaggacggggctctggtc
tccatcaagcccaacgagaggtacatcctggtctccaggaccaacgactactggtggcat
gtccggaaggaccagaggaccaaacccttctatatccctgccaagtatgtgagggagctc
tctgtgaagacccagggcccactggacctcactaattctgggactcagagtcgcacattc
ttgctgtcaacgactgacagagagccactggacatgtctaacaaaggtcaatggtcaggt
gctgtgacaaaggtccacatgtccatggatcactctgcgagagccaccactctcaggatg
tccacgttcggggtctcactcgacattgatgatatcaagcattatgagcacatgaagacc
atggtgggactgcagacctccaataacgagactagagatatcaagccacatgatctgaag
aggcgaagtttggctccaggtttctcattcacctcagcctcagacgctcaaggtcttggt
gatatgttgcagcactgttccctaaagctccatgtctcacctgagcccacaagcagactt
ccccagttgacagactttgtgggaacagaactggctggatcattgggttcaactgaaaca
ccagcagaacaacagcagagcctggatcgaacttctggtccgattgacattacagcccct
tcccctacagctcaggtcaaagagagtgtccagaacgctgtgtacgttaatgtagcggag
ctcggcagaaacatctctgagtcccctccctcagccttctcccctccctgcactcttcca
tacctggactctaagggatgggaggtgcacactgaccaggagagtggacgggagtactac
taccaccccgaatcggggcagaccacctgggacaacccccacatagaccctgaggctccc
gccgaggtgtctgtgtgttcgccctcctctcagttcccctccctgtcccccacctccgcc
tccccccctgcatggacctctgactgggagcagtgtttggatgtgaccagcggccgccag
tacttctacaacccgggggagacgtcttgggagtccccagagccacagtgcccctacccc
gctctgatggagcctctgagtgggctccggtctctggaggaagggccgcctcccctgcct
gaggatgactacccagcagataactacctagccgaggttgacctaccagaagaggagttg
ttggctgtgtcccctgtgacccctcactccttccctaaggactacacccccagccatgtg
acccgggcagtcatccccagggccagcctggacaggagtgccccgacgggctggaacctc
aacatagaccctgatgggacttgggtgttctccaacagacactcacctgatcagtggatc
aaatcattggatgacagaggactggcgtactactaccttagagatggctccagatcccag
tggaacctgcctgaggcccctgtagtgtcaggccagtccaaggtggggaacggtgttgag
ctggacggggtctctttaacggtcatgaagaactggagacacaccatgggtgcaacttat
gtcagctcagccctgcaggaggtgttctccccgactcacagaagaaatgcctcagactac
ggctcctgtgtgaacaactctccagagatggggcagcaccacgtgcagagtttggaaaaa
gttggaatactcaacaaaactaaagtgtcagagaacgggaaaagagtaaggaaaaactgg
gcccagtcatggacggttcttcacggaggagttctgaccttccataaagagcccaagtct
gcagccatgggagcctctatcaagaccaatcagatcgtcccagaggtcacggtggatcta
cgaggggcaaagattggctgggctctgagggataaatccagcaaaaagaatgttgtagaa
ttaaaagacagaaatggcgttgagtttctgctacagtacgacactgagagtatcatcaac
gactggcacaaagttctaatggacaccatacgacagctggaccaggaacaccaccaatct
gaggaggaggatggggacatcagtgagaagtcctacagtacagacagagatcagaggtca
ccaggtaccatggacaggaggaggaggtcttccagaccgagcacggccacctcctctggg
ggagagaccgaacagaagaaggttcgtaccaagctgatgaagttcctcctgaaacgaccc
acactgcagttcgtcaaggagaagggttacatccgagacaatgtgttttgctgtcatctg
gctgcactgtgtgcccaggagaaaactacaatccccagctttgtggagaaatgtattcga
gcagtggaaaagagaggtctggacatggatggactctacagagtcagtgggaatctagct
gtcattcagaaactacgcttcaaggcagatcatgaggagctggacctggaggatggccag
tgggaggacatccacgttatcacaggggctctgaagctgttcttcagggagcttcctgaa
ccccttttccccttcagtcacttcagctgcttcatccaggccatcagaactgttgattac
caccacaaagtgtcttacatgcaagagcttgttgagtctctccctcggccaaaccatgat
accatggaactcctcttcagccatttacgcaaagtgatagagtatggagaggagaaccgt
atgactgtgcagaacgtggctatcgtctttggtcccacgctgctccggccagagatggag
tcagccaacatcgccatgcacatggttttccagaaccagatagtggagctaatcctcaac
caatacgaatacattttccattccagttga
DBGET
integrated database retrieval system
