Oncorhynchus tshawytscha (Chinook salmon): 112261424
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Entry
112261424 CDS
T05605
Name
(RefSeq) catenin alpha-2 isoform X1
KO
K05691
catenin alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04520
Adherens junction
otw05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112261424
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112261424
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112261424
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112261424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
PipB2_N
Motif
Other DBs
NCBI-GeneID:
112261424
NCBI-ProteinID:
XP_042185709
LinkDB
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Position
LG11:10487578..11188270
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AA seq
905 aa
AA seq
DB search
MTTATSPILLKWDPKSLEIRTLTVERLLEPLVTQVTTLVNTSNKGPSSKKKGRSKKAHVL
ALSVEQATQNFLEKGEQIAKNSHDLKEELILAVEDVRKQGDSMRVASQEFADDPCSSVKR
GTMVRAARALLSAVTRLLILADMADVMRLLAHLKIVEEALEAVKNATNEQDLANRFKEFG
KEMVKLNYVAARRQQELKDPQCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRANR
DYVFKQVQEAIGGISSAAQATSPGDEKHGHAGIGELAAALNEFDNKIILDPLTFSEARFR
PSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNNTGRKEKGD
PLNSAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSGNEKEVKEYAQV
FREHANKLVEVANLACSISNNEEGVKLVRMAATQIDSLCPQVINAALTLAARPQSKVAQD
NMDVFKDQWEKQVRILTEAVDDITSVDDFLSVSENHILEDVNKCVIALQEGDVDTLDRTA
GAIRGRAARVVHIINAEMENYEPGVYTERVLESIKLLSETVMPRFAEQVEVAIEALSTNP
PQPFEENEFIDASRLVYDGVRDIRKAVLMIRTPEELEDDSDFEQEDYDARSRTSVQTEDD
QLIAGQSARAIMAQLPQEEKAKIAEQVESFRQEKCKLDAEVAKWDDNGNDIIVLAKQMCM
IMMEMTDFTRGKGPLKNSSDVINAAKKIAEAGSRMDKLARAVADQCPDSACKQDLLAYLQ
RIALYCHQLNICSKVKAEVQNLGGELIVSGLDSATSLIQAAKNLMNAVVLTVKASYVAST
KYAKVYGAAAVNSPVVSWRMKAPEKKPLVKREKPEECQTRVRRGSQKKHISPVQALSEFK
AMDSF
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgctacgtcccccatcctgttgaagtgggaccccaagagtctggagatccgc
accctgactgtggagcggctgctggagcccctggtcacacaggtgaccaccctggtgaac
accagcaacaaagggcccagcagtaaaaagaaggggcgctccaagaaggcccacgtgctg
gccctgtccgtggagcaggccacgcagaacttcctggagaagggcgagcagatcgccaag
aacagccacgatctcaaggaggagctcatcctcgccgtggaggacgtccgcaagcaaggc
gattcaatgcgcgtggcctcccaggagtttgctgacgacccttgctcctcagtgaagcga
ggcaccatggtgagggctgcccgcgccctgctctccgccgtcacccgcctgctcatcctc
gccgacatggccgatgtcatgaggttgctggcccacctgaaaatcgtggaggaggccctg
gaggcagtgaagaatgccaccaacgagcaggaccttgccaaccgcttcaaagagtttggc
aaggagatggtgaagctcaactatgtggctgcccgcagacagcaggagctgaaagacccc
cagtgccgggacgaaatggcggctgcgcgcggcgccctgaagaagaacgccaccatgctc
tacacggcctcgcaggccttcctgcgccacccggacgtggcggccacgcgcgccaaccgc
gactacgtcttcaagcaggtgcaggaggccatcgggggcatcagcagtgccgctcaggcc
acctcacccggcgacgagaagcacggccacgctggcatcggcgagctggccgcggccctc
aacgagtttgacaacaagatcatcctggacccgctgacgttcagcgaggcccgtttccgc
ccctccctggaggagcgcctggagagcatcatcagcggcgccgccctcatggccgactcg
tcctgcacccgcgacgaccgccgcgagcgcatcgtggccgagtgcaacgctgtccggcag
gccctgcaagacctgctgagcgagtacatgaacaatactggcaggaaagagaaaggagac
ccgctgaactctgccatcgacaagatgaccaagaagaccagggatctgcgcagacagttg
aggaaggcggtgatggaccacatctccgactcgttcctggagaccaacgtgccgctgctg
gtgctcatcgaggcggccaagagtggcaacgagaaggaggtcaaggagtatgcgcaggtg
ttccgggagcacgccaacaagctggtcgaggtggctaacctggcctgctccatctccaac
aacgaggagggtgtgaagctggtgcgcatggccgccacccagatcgacagcctctgccca
caggtgatcaacgcggccctcaccctggctgctcggccccagagcaaggttgcccaggac
aacatggatgtgttcaaggaccaatgggagaagcaggtgcgcatcctcaccgaggccgtc
gacgatatcacttctgtggatgacttcctgtccgtgtcagaaaaccacattctggaggat
gtgaacaagtgcgtgattgccctgcaggaaggcgacgtggacaccctggaccgcacggcg
ggcgccatcaggggtcgggcggcccgcgtcgttcacatcatcaatgcggagatggagaac
tacgagccaggtgtttacaccgagcgcgttctggagtctatcaagctgctgtctgagacc
gtcatgccccgtttcgctgaacaagtggaggtggccattgaggcgctgagcacaaacccc
ccacagcccttcgaggagaacgaattcatcgacgcgtcccgcctggtctacgacggcgtg
cgtgacatacggaaagccgttcttatgatcaggacacctgaggagctggaggatgactca
gactttgagcaggaggactacgacgcccgcagcaggaccagtgtccagacagaggacgac
cagctcatcgccggacagagcgccagggccatcatggcccagctgcctcaggaggagaag
gcgaagatcgccgagcaggtggagagcttccggcaggagaagtgcaagctggacgccgaa
gtggccaagtgggacgacaatggcaacgacatcattgtccttgccaagcagatgtgcatg
atcatgatggagatgacggacttcaccagaggcaaagggcccctgaagaactcctctgat
gtcatcaacgccgccaagaagattgcagaggcaggctccaggatggacaaactggcccgc
gccgtcgccgaccagtgccctgactcggcctgcaagcaggacctgctggcctacctgcag
agaatcgccctgtactgccaccagctcaacatctgtagcaaggtcaaggccgaggtccag
aacctgggaggagagctcatcgtctctgggctggacagcgccacctccctgatccaggcg
gccaagaacctgatgaacgctgtggtgctcacagtcaaggccagctacgtggcgtccacc
aagtacgccaaggtgtacggcgccgccgccgtcaactcgcctgtggtcagctggcgcatg
aaggcgcccgagaagaagcccttggtgaagcgggagaagcccgaggagtgtcaaacgcgc
gttcgacggggctcgcagaagaagcacatctcgcccgtccaggccctcagcgagttcaag
gccatggactccttctaa
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