Oncorhynchus tshawytscha (Chinook salmon): 112261443
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Entry
112261443 CDS
T05605
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00061
Fatty acid biosynthesis
otw00071
Fatty acid degradation
otw01100
Metabolic pathways
otw01212
Fatty acid metabolism
otw03320
PPAR signaling pathway
otw04146
Peroxisome
otw04216
Ferroptosis
otw04920
Adipocytokine signaling pathway
Module
otw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112261443
00071 Fatty acid degradation
112261443
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112261443
09143 Cell growth and death
04216 Ferroptosis
112261443
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112261443
03320 PPAR signaling pathway
112261443
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
otw01004
]
112261443
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112261443
Enzymes [BR:
otw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112261443
Lipid biosynthesis proteins [BR:
otw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112261443
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of breast milk
112261443
Exosomal proteins of breast cancer cells
112261443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GSG-1
Motif
Other DBs
NCBI-GeneID:
112261443
NCBI-ProteinID:
XP_024292533
UniProt:
A0A8C8JBY6
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All DBs
Position
LG11:complement(12359275..12413434)
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AA seq
712 aa
AA seq
DB search
MKARTPHSKATDVMQMQAQELLRQLQIPELEDVCQYMHSLPANILMGVGALAALTTYWYA
TRPKALKPPCDLNMQSVAMTGDGYVRRSILNNNDEHMTHYYSDARTMYEVFLRGMRVSID
RPCLGSRKPNQPYKWLSYREVAEKAECIGSALLHRGHSQTGDKHIGIFSQNRPEWTISEL
ACYTYSLVCVPLYDTLGLEAIEYIIDQAAISTVICDLVDKVRLILDCVSGKEHTLKTIVV
MEDFDKELVACGQQSGIEILSLKDVEAVGKAHHQQPLPPTPDDLALICFTSGTTGNPKGG
MLTHGNVIANCAAFIKITEVHCMLNLHDIHMSYLPLAHMFERVVEGVILVHGARIGYFQG
DIRLLMDDLKTLQPTVFPVVPRLLNRMFDKIFGQANTPLKRWLLVFASRRKHAEMMNGVV
RKDSLWDKLIFQKVQNSLGGRVRLMITGAAPVSPTVLTFLRAALGCQFYEGYGQTECTAG
CTMSVPGDWTAGHVGAPLPCNYVKLADVTEMNYFAANGEGEVCVKGPNVFKGYLNDPEKT
KEALDQDGWLHTGDIGKWLPNGILKIVDRKKHIFKLAQGEYIAPEKVENIYIRSDPVAQI
FVHGDSLQACLVGIVVPDPDFLPGWAKKKGIEGSYLEMCASKELKNAILEDILRLGKEGG
LKSFEQVRDISLHTEMFSVQNGLLTPTLKAKRTDLRSHFQEQIDLLYAKIKM
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgcgcacaccacactcgaaagcgacagacgtgatgcagatgcaagcccaggag
ctcctgagacagctgcagatcccagagctggaggatgtgtgccagtacatgcacagcctg
cccgccaacatcctgatgggtgtgggtgcccttgccgccctcaccacctactggtacgcc
acgcggcccaaggccctcaagccgccctgcgacctcaacatgcagtcagtggccatgacg
ggtgacggttacgtcaggcggtccattctgaataacaacgacgagcacatgactcactac
tacagtgacgcacggaccatgtacgaggtattcctccgaggcatgcgggtgtccattgat
aggccctgtctaggatcaagaaaacccaaccagccttacaagtggctgtcataccgagag
gtggcagaaaaagccgagtgcattggctcggctcttctccacagagggcactcccagact
ggagacaagcatatcggcatcttttcccagaacaggccagagtggaccatttcagagctg
gcctgttacacatactccctggtgtgtgtaccactgtatgacacgctaggcctcgaggcc
attgaatacatcatcgaccaagccgctatctctacggtgatctgtgacttggtggacaaa
gtgcggctcatcctggactgcgtgagcggcaaggagcacacattgaagacaatcgtggtc
atggaggacttcgacaaggagcttgtggcctgcggacagcagagcggcatcgagatcctt
agcctgaaggatgtggaggctgttggcaaagcccaccaccagcagccattgcccccaaca
ccagatgacctggcactcatctgcttcactagtggaaccacaggaaacccaaagggtgga
atgcttacacatggcaatgtcatcgccaattgcgctgctttcatcaaaataacagaggtg
cactgcatgctgaacctccacgacattcacatgtcctacctacctctagcacacatgttt
gagagggtggtggagggagtgatcctggtgcacggtgcccggattggctactttcagggg
gacatccggctcctgatggacgatctgaaaaccctgcagcccacagtcttccctgtcgtc
ccccgcctgctcaaccgcatgtttgacaagatcttcggacaggccaacacgccactgaag
aggtggctgctggtttttgcctccaggaggaagcatgcagagatgatgaatggtgtggtc
aggaaggacagcttgtgggacaagctcatcttccaaaaagtccagaacagtcttgggggt
cgtgtgaggctgatgatcacaggagcggccccagtttctccaaccgtcctgacgttcctt
cgtgccgcacttggctgccagttttacgaaggctatggtcagactgagtgcacagctggg
tgtaccatgtccgtgcctggggactggacagcaggtcatgtgggggctccactgccctgc
aactatgtaaagctggcagacgtgactgagatgaactactttgctgccaatggggaagga
gaggtgtgtgtaaaaggaccaaatgtattcaagggctacctgaatgacccggagaagact
aaggaggccttggatcaggatggctggctccacacgggagacattgggaagtggctgcct
aatggcattttgaagattgtggacaggaagaagcacatcttcaagctggctcaaggagag
tacattgccccggagaaggtcgagaacatctacatccggagcgacccggtggcccagatc
tttgtccatggcgatagcttgcaggcatgcctggtgggcattgtggtgcctgatccagac
ttcttaccaggatgggcaaagaagaagggcatcgagggttcttatttggagatgtgcgca
agcaaggagttgaaaaatgccattctggaggacattctgaggctggggaaagaagggggg
ctgaagtcttttgagcaggtgagagatatctcgctgcacacggagatgttctctgtccag
aacggcctcctgacgcccacgctcaaggccaagaggaccgacctccgcagtcacttccaa
gagcagattgacctgctctatgcgaagatcaagatgtga
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