KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112261464
Entry
112261464         CDS       T05605                                 
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112261464 (wdhd1)
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    112261464 (wdhd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Ctf4_C WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz HMG_WDHD1 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 EIF3I Beta-prop_RIG_2nd WDR55 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd eIF2A Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_SCAP HMG_box Beta-prop_Vps41 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_WDR75_2nd Beta-prop_IFT122_1st Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 112261464
NCBI-ProteinID: XP_024292565
LinkDB
Position
LG11:13800918..13844730
AA seq 1137 aa
MPGERKPMRYGHSEGHTDVCFDDAGKYIVTCGSDGDVRIWESLDDDDPKSINVGEKVYSL
ALKNGKLVTAASNNTVQIHTFPEGDPDGILTRFTTNATHITYNRSGSRVAAGSSDFMVKV
VEMYDSSQQKTLRGHTAPILSVTFDPKDEFLASASCDGSVAVWKIEEQTQVTSWPLLQKS
NDVINAKSLCRLAWQPKAAKLLAIPVETTVQLYQRDSWAQVGTLSDDLGTQAINVVAWSP
CGKFLAAGSIGGLLTVWDVESKLCVERQTHEKGYTVCGLAWHPLGGQIAYTDTEGCLGVL
DGLSSSSSSSSTTASSTTTKQAPASYNDLFDDDDDRPMDEGISEGTCSPAKNPGDEDDDD
DLIPATGRARNRSAFLDDENSLDTGSLKQGLDKFVDDDDSAIVPPAAAAAPLWPVYDGPM
PTPPQKAFQPGSTPAHLMHRFMMWNSVGIVRGYNDDQDNAIDVEFHDTAVHHAMHLTNSL
GHTVADLSQEAVLLACPGTDELASKLQCLHFSSWDTNKEWMVDLPKGEDVQALCLGQGWA
AAATSALILRLFSIGGVQRELFSLPGPVVCIAGHGEQLLVVYHRGTGFDGEQALGVQLLQ
FGQKRRQVIHGEPLPLSRKSHLSWLGFTAEGTPCFIDSEGVVRLLNRSLGNMWTPVCNTR
DNCKGKSDHYWMVGVHENPQQLRCIPCKGSRYPPTLPRPAVAVLPFKLPLCQTTTEKGQM
EEQYWRSVLLHNHYGFLSSSGYEIDEEGQSQAQKEQQELLMKMFALSCKLEREFRSVELA
ELMTQNVVTLAIRYASRSRRMALAQRLSDLALEKANQLQGEEPQEEEEEEPLQYTRRNTG
YSQSSSEMGADRQHSSHRQAQEEVVDEEQGQEEHMDEGDVAESKRQGLNPFAKGTAASPE
KPSPKPVSKEGRVNPFKVSSGLGRSGSAGGQNRVTNVLDSMMLSSKKPTALLSSSGSTGK
LNKTPFLKPLAPRPKTKTQSTLLHMNTPKAANKKAVEEPAVCRLKQTEAPPPASPAENVE
NKKHKSGFQLWLEDNRRIILADNPDLEETDVIKEAIGRFRTLSADDRLTWTERAKGQSGD
VADMKKRKRGEEENRGDKNGQSEADETRQSEADETSAKKKKPFDTSAKLSAFAFNKN
NT seq 3414 nt   +upstreamnt  +downstreamnt
atgcccggtgaaagaaagccaatgcgctacggccactcggagggacacactgatgtttgc
ttcgatgacgctggaaagtatatagtcacttgtggaagtgatggggatgtgagaatatgg
gagagtctggatgatgacgatcccaagtccatcaacgtgggggagaaggtctattcttta
gccttgaagaatgggaagctggtcacagcagcctccaacaacacagtacaaatccacacg
ttccctgagggtgacccagatggcatcctcacccgctttaccaccaacgccacccacatc
acctacaaccgcagcggctccagagtcgctgccggatccagtgacttcatggtgaaggta
gtggagatgtacgacagcagtcagcagaagaccctgcggggacacactgcacccatcctc
agtgtcacctttgaccccaaggatgagttcctggcctctgctagttgtgatggatctgta
gctgtgtggaagattgaggaacagactcaggtgaccagctggccgctgctgcagaagtcc
aatgatgtcatcaatgccaagtccctgtgccgactggcctggcagcccaaggccgctaag
ctcctggccattcccgtggagacaacggtgcagctgtaccagagagactcctgggcccag
gtgggcacactctccgatgaccttggcacacaggcaataaatgttgtggcatggtcgccc
tgtgggaagttcttggctgcagggagcattggaggtttgctgacggtctgggacgtggag
agcaagctgtgtgtggaaaggcagacgcatgagaagggctacaccgtgtgtggactagct
tggcatcccttgggcggtcaaatagcctacaccgacacagagggctgtcttggcgtgctg
gatgggctctcctcttcatcctcttcttcctccactacggcttcttccactacgaccaag
caggctccagccagctacaatgaccttttcgacgacgatgacgacagacccatggacgag
ggtatcagcgagggcacatgttcacccgccaagaaccccggggacgaggacgatgacgac
gacctcatacctgcgacggggcgagcacggaacaggagtgccttcctcgacgacgagaac
tcactagacacaggctcgctcaaacaggggctggataagtttgttgatgacgatgacagc
gccatagtgccccccgctgccgcggctgctcccctctggcctgtctatgacgggccaatg
cccaccccaccacagaaggctttccagccaggctccaccccggcacacctcatgcaccgc
ttcatgatgtggaactcggtgggaattgtgcgcggctacaatgatgaccaggacaacgcc
attgatgtggagttccacgacacagccgtgcaccatgcaatgcacctcaccaactccctg
ggccacaccgtggcagacctctcccaggaggctgtgctgcttgcctgccccggcactgac
gagctcgccagtaagctccagtgccttcacttctcatcgtgggacaccaacaaggagtgg
atggtggatctgcccaagggggaggatgtgcaggccctatgcctgggccagggctgggcg
gcggctgccaccagtgccctcattctgcgccttttctccatcggaggggtgcagagggag
ctgttcagcctgcccggacccgtggtctgcattgctgggcatggggagcaactgctcgtc
gtctaccaccgaggcacagggtttgatggagaacaggccctaggggtccagctgctgcag
tttggacagaagaggcggcaggtcatccacggggagcccctccccctctcccgcaaatct
cacctttcatggttaggcttcacagccgagggaaccccatgcttcattgattctgagggt
gtggtgcgcctgctaaaccgctccttgggaaacatgtggacacctgtgtgtaacaccagg
gataactgcaagggcaagtcagaccactactggatggttggagtgcatgagaacccccag
cagctcaggtgtatcccatgtaaagggtcccggtatccccccacgttgcccaggcctgct
gtggccgtccttcccttcaagctgcccctctgtcagaccaccacagagaagggccagatg
gaggagcagtactggcgctcggtgctcctccacaaccactacggcttcctgtcgtccagt
ggctatgagattgacgaggaaggccagagccaagcccagaaagaacagcaggagctgctc
atgaagatgtttgccctgtcgtgtaagctggaaagggagttccgctccgtggagctggcc
gagctgatgacccagaacgtagtgaccctggccatccgctacgcctcgcggtcccgccgc
atggccctggcccagcgcctcagcgatctggccctggagaaggccaatcagctgcagggg
gaggagccccaggaggaggaagaggaggagccactccagtacaccagacggaacactggg
tacagccagagcagcagtgagatgggtgcagatcgccaacacagcagccacagacaagca
caggaggaagtggtggatgaagagcagggtcaggaagaacatatggatgaaggggatgta
gcagagagcaaaagacaaggtctaaatcctttcgctaaagggactgctgcatcacctgag
aaaccttctcccaaacctgtaagcaaagaaggacgtgtgaaccctttcaaggtgagcagc
gggttagggaggtctggttcggcggggggtcagaacagggtgacaaacgtcctggacagc
atgatgttgtccagcaagaagcccactgctctgctgagcagctccggctccacggggaaa
ctgaacaaaacacctttccttaagcctctggctcccagacccaagaccaagacccagtct
acactgctgcacatgaacactcccaaagcagccaataagaaagcagtggaggagccggca
gtgtgtaggctgaaacagaccgaggcaccgcctccagcctcaccagcagaaaatgttgag
aataagaagcacaagtcgggcttccagctgtggctggaggataataggaggatcatcctg
gctgacaaccccgatctggaggagacggatgtcatcaaggaggccattggccgcttcagg
accctgtctgcagacgatcggctgacctggacagagcgggcaaaaggacagtctggagac
gtggcggatatgaaaaaacgaaagcgaggagaagaagagaacaggggagacaagaacgga
cagagtgaggcagacgagactagacagagtgaggcagacgagaccagtgccaaaaagaaa
aagccctttgacacctcagccaagctctcagcatttgccttcaacaaaaattaa

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