Oncorhynchus tshawytscha (Chinook salmon): 112261472
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Entry
112261472 CDS
T05605
Name
(RefSeq) EMILIN-1
KO
K24246
emilin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112261472
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
112261472
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
Collagen
DUF1690
ATG17_like
Baculo_PEP_C
DUF4407
Apolipoprotein
OmpH
CENP-Q
AAA_13
DUF948
AATF-Che1
Tektin
Syntaxin
CC_CEP63-bind_CEP152
Motif
Other DBs
NCBI-GeneID:
112261472
NCBI-ProteinID:
XP_024292589
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All DBs
Position
LG11:complement(14231620..14305985)
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AA seq
1106 aa
AA seq
DB search
MAGPVLFLVLWVFTWSWEVRCASYPQRYNLYSGQTQAQPQNGARAASRHRNWCAYVVTKT
VTCVVEDGVETYVKPDYHPCSWGTQCSRMVTYRTYMKPRYKVAYKMVTDMEWKCCHGYTG
DECSEGPSGGSGTQIATARPRPKPSRPGQTGTGTGHGGQNGGDGRGDGDKMQQLEDKIQS
LTKDLHDLQSTLRGMNERFQEEMHKPGFTGGGTKTPADSAQPEMKETIHSIQTKLDQLDN
RTQAHDKTLVSINNHLVNGNAGSGNDLGGGTGGSSGGTGGFSGGTLSTLKEEILRELERR
MSLSCSSCQSGDEDLRMQQQEIRERIQVMEKQLNAVDGHYRQSLDGLRQEVTRSQGCCNT
VTDLKNRVTDAERKISSVSENYNVIQNRLDKELGSGGSHGGGGFGGGGFGPGGGFGPNAG
SGLPKVIEDRLDSRLNDLERRLNSTVQYTEESCTLIENDLKDYFHRELGDLRTMFLDRFD
AQGYRIEDIELDVGTLKDRVSDHDKKLTRLENSTALLDKSLTDCGCGGLGGGAGGVVEDS
VKSITWRVVANEDEIRRFDTRIKDLSVSGDSLMDKVVDLSHDIRKIKALTGDNGEHFNRI
VTEIETLGRCVDDCDICGRVEDELKKLKNNTQHTLSRWEKDVNAIRTRVDSDQSSCSQVC
STLQEEVGKLQEEVDKCSGQCKIRLVTPTTGGGTGGGLDDPQKPLDGHSVIGGTSNNGHL
KSLQGELSEVILTFSSINDTLRGLEHTVQKHGSIITDLGNTKNKIISELDKIQQDVTEHI
EESRNHLDGVDRDVRRFENTLVVEMGDCKRSGDGLEKRLSKMEGVCGRLDGISDSLQKIK
EGLNKHVSGLWNCVNGLNATVISHGGVIKNIQTTQLDGIHGKIKNLNSSISNILKEFQNL
SEQDLTGLPGPPGPSGERGFPGFPGPKGSQGRDGPVGRQGENGPRGPPGLKGEQGMPGAD
ANMPKLSFSAALTYPVLNAGTIVFDKIFVNEGEFYDPRTGIFTAPIDGRYFFSAILTGHK
NEKIEAVLSKSNYGMARVDSGGYQPEGLENKPVAEAKINPGSLAVFNIILPLQVGDTVCI
DLVMGKLAHSVEPLTIFNGMLLYEQM
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaccagttctgtttcttgtgctgtgggtcttcacatggtcctgggaggttcgg
tgtgcttcatacccgcagcggtataatctctattcgggacagacccaggcgcagccacag
aacggcgcacgggcagcgagcagacacagaaactggtgtgcatatgtggtgacaaagaca
gtgacctgtgtggtggaggatggagtggagacctacgttaagcctgactaccacccctgc
tcctggggcacacagtgctctcgcatggtgacgtatcgaacatatatgaagccgcggtac
aaggtggcctacaagatggtgacggacatggagtggaagtgttgccatggttacactggg
gacgaatgtagcgaggggccgagcggaggttctgggacccagattgctacagccagaccc
cggccgaaaccctcccgacctggacagactggaaccggcacaggtcacgggggacagaat
gggggagacgggcgaggagacggcgacaagatgcagcagctggaggacaagatccagagc
ctgaccaaggacctccatgacctgcagtccactctgaggggcatgaatgaacgcttccag
gaggagatgcacaaaccgggtttcaccggtggcggcaccaagacccctgcggactcagcc
cagcccgagatgaaagagaccatccacagcatccagaccaaactggaccagctggacaac
cggacccaggcccatgacaagaccctggtcagcatcaataaccacctggtcaatgggaat
gctggcagtgggaatgatctcgggggtggcactggcggctcctctggaggcaccggtggg
tttagtggcgggacgctcagcacgctgaaagaggagatcctgagagagctggagaggagg
atgtctttgtcctgctcatcctgccagtctggtgatgaggacctgcgaatgcagcagcag
gagatcagggagaggatccaggtaatggaaaagcagctgaacgcagtggacggacactac
cgccagagcctggacggcctacgccaggaggtcacacgctcccagggctgctgcaacact
gtcaccgacctcaagaacagggtcacagatgcagagagaaagatcagctctgtgtcggag
aactacaatgtcatccagaaccgcctggataaggagttgggaagtggtggtagtcatggc
ggtggaggtttcggaggaggtggctttggacccggtggtggctttggacccaatgctggc
agcggcttacccaaggttatagaggacaggctggatagccgtctgaacgacctggaaagg
cggttgaacagcacagtgcagtacacagaagagagctgcaccttgatagagaacgacttg
aaggactacttccaccgtgagctcggtgacctccggaccatgttcctggaccgattcgat
gcccagggctaccgcatcgaagacatagagctggacgtgggcaccttaaaggacagagtg
tcggaccacgacaagaagctgacccgcctggagaactctacggcactcctagacaagagt
ctgactgactgtggctgtggaggattaggaggaggagctggaggagtggtagaagactct
gtgaagtctatcacgtggagggtggtggctaatgaggatgagatccgccgcttcgacaca
cgtatcaaggacctgtccgtctcaggcgactcgctaatggacaaggtggtggacctcagc
cacgacatccgtaaaatcaaagccctgaccggagacaatggcgaacacttcaaccgcatt
gtcacagagatcgagacactgggtcgttgcgtggacgactgcgacatctgcggaagagtg
gaagacgagttgaagaagctgaagaacaacacgcagcacactctgagccgctgggagaag
gacgtcaacgccatccggacacgggtggactcagaccagagctcctgttcgcaggtgtgc
tccaccctgcaggaggaggtgggaaaactccaggaggaggtggacaagtgtagtggccag
tgtaagatccgtcttgtgaccccaacaacaggtggcggcactggaggaggcctggatgac
ccccagaagcctctggatggccacagtgtgattggaggaacatctaacaacggccacctc
aagtccctgcagggtgagctgtccgaggtcatcctgaccttcagctccattaatgacaca
ctgaggggcctggagcacacagtgcagaaacacggaagcatcatcaccgacctgggcaac
acaaagaacaagatcatctcggagctggacaagatccagcaggacgtgaccgagcacatt
gaggagagtcgcaaccacctcgacggggtggatcgtgatgtgcgccgtttcgagaacacc
ctggtggtggagatgggtgactgcaagcgctctggtgatggcctggagaagaggctgtcc
aagatggagggtgtgtgtggacggctggacggcatctcggactcgctccagaagatcaag
gaggggctgaacaagcatgtgtcgggcctgtggaactgtgtgaacggcctgaacgccacg
gtcatctcccacggaggggtcatcaagaacatccagaccactcagctggacgggatccac
gggaaaatcaagaacctcaattcgtccatcagcaatatcctcaaggagttccagaacctc
tcggaacaggacctgactggcctgcctggtcctccaggtccctctggggaaagagggttc
ccaggctttcccggccccaaggggtctcaaggtagggacggacctgtgggcaggcaggga
gagaacgggcccagaggaccaccaggtctcaaaggtgaacaaggtatgccaggtgctgat
gccaacatgcccaagctctccttctctgcagctctcacctaccccgtgcttaacgctggc
accatcgtcttcgacaagatctttgtcaacgagggagagttctatgacccgcggacaggc
atcttcacagcgcccattgatggacgctacttcttcagcgccatcctgacgggccacaag
aacgagaagatcgaggcggtgctgtccaagtccaactacggaatggcccgggtagactcc
gggggataccagccagagggcctggagaacaagccagtggctgaggccaagatcaacccc
ggctccctggccgtgttcaacatcatccttcccctccaggttggagacacggtctgcatt
gacctcgtcatgggcaagctggcccactccgtagagcctctcaccattttcaatggaatg
ctgctgtacgaacagatgtga
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