Oncorhynchus tshawytscha (Chinook salmon): 112261477
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Entry
112261477 CDS
T05605
Symbol
nrxn3a
Name
(RefSeq) neurexin 3a isoform X1
KO
K07377
neurexin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112261477 (nrxn3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112261477 (nrxn3a)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112261477 (nrxn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Protocadherin
Motif
Other DBs
NCBI-GeneID:
112261477
NCBI-ProteinID:
XP_024292595
LinkDB
All DBs
Position
LG11:15050862..15493815
Genome browser
AA seq
1701 aa
AA seq
DB search
MDVLGLSARLQLLLSAFLGVCLSLEFTGAPGQWARYLRWDASTRSDLSFQFKTDVSTALL
LYFDDSGYCDFLQLMVVEGKLQLRFSIDCAETAVVSDKRVNDSSWHFATLSRYGLRTVLG
LDGQVKADEVRPTGGSRQHMKIVSDLFLGGVPLDIRTSALTLPTARDAPPFRGTISDLKY
GNTEPVLLSSLRVRLESEGRCTENPCENSGSCTVVDGEPMCDCSKTEYKGRFCNEEVNNN
IPGFSHMMMAEQAKSKAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLI
LHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNTWHDVKVTRNLRQVTI
SVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIR
LELSRLARIIDPKMKIQGDVVFKCENVATLDPISFETPEAYISLPKWNTKRMGSISFDFR
TSEPNGLILFTHGKPQERKEAQRSQKNTKVDFFAVELLDGSLYLLLDMGSGTIKVKATQN
KVNDGAWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPSDRANLILP
TELWTAMLNYGYVGCVRDLFIDGRSKDIRQIAEAQNGAGIKPSCNKVVGKQCESYPCKNR
GVCKEGWNRFICDCTGTGYWSRTCEREASILSYDGSMYMKVVMPQVMHTEAEDVSLRFMS
QRAYGLLMATTSRDSADTLRLELDGGRVKLTVNLDCIRINCTSSKGPETLYAGQKLNDNE
WHTVRVVRRGKTYKLTVDDDVAEGQMAGDHTRLEFHNIETGIMTERRFVSAIPSSFIGHL
QSLRFNGMLYIDLCKNGDIDFCELNARFGMRSIIADPVTFKSKSSYLSLATLQAYTSMHL
FFQFKTTSPDGFIMFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRALHDNQWH
NVVITRDNSNIHTLKVDAKATSQVVNGAKNLDLKGDLFIAGLGPGMYGSLPKLVASRDGF
QGCLASVDLNGRLPDLLQDALFRSGQIERGCEVGFTKADLQGPSTTCQEDSCANMGVCIQ
QWENYTCDCSMTSYTGTQCNDPGMTYIFGKGGGLITFNWPANERPSTRTDRLTIGFSTSL
KDGILVRIDSAPGLGDYLMLHIEQGKIGVTFNIGTMDISVRESSTPVNDGKYHVVRFTRN
GGNATLQVDNWSINEHFPGATTDNERLEIATKKFPLKYARPVVDWLQEKGRQLTIFNTQA
TVTIGGSDRSRPFQGQLSGLYYNGLKVLNMAAESNPNIKINGSVRLVGDVPSVAGSARTT
AQPPEMSTTFIETTTTMSTTTTRKHRSSPTIQQTTDDIVSSAECSSDDEDLEECDSGHAG
GLGGELVIPVLLEEPLVLPPVATRAPSIPLPPTLRPPLTIIETTKESLSTATEAGVPCLS
DRGSDDCDDDDDDGLVISGYGSGEAFNSNLPPTDDEDFYTTFSLVTDKTLSTSAFEGGYK
VHAPKWETKDFSSNKPSSERGRTTTTAALPLAPDQSRYTSTATLHHTPPAKLPAGKMNNR
ELKPQPDVVLLPLPTLPYEVDSTKQRAPVITSPMFRNVPTALPTQPGVNRVPGPPEVSRQ
SSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDESRNYITNSATQSNGAVMKD
KQQSAKGSKVKQKNKDKEYYV
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgctgggcttgtctgcgaggctgcagctgctgctctcggccttcctgggtgtg
tgtctgagcctggagttcacaggggcccccggccagtgggcccgctacctccgctgggac
gccagcacacgtagcgacctcagcttccagttcaagacagacgtgtccacggcactgctg
ctctacttcgacgacagtggctactgtgacttcctgcagctgatggtcgtggagggcaag
ttgcagctgcgcttcagcattgactgcgccgagaccgccgtggtgtccgacaagcgggtc
aacgacagcagctggcactttgccacactgagccgctacggcctgcggacggtgctgggg
ctggacggccaggtcaaggcggacgaggtgcggcccaccggaggtagccgccagcacatg
aaaattgttagcgatctgttcctgggtggcgtgccgctggacatccgtacgtcagcgctc
acgctgcccacggcacgtgatgccccacccttcagaggaacaatctcagatctgaagtac
gggaacacagaaccggttctcctcagcagcttgagggtgcgtctggagtcggaggggcgc
tgtaccgagaacccgtgcgagaacagtgggagctgcaccgtggtggatggggaacccatg
tgcgactgctccaaaacagaatacaagggccgcttctgcaatgaagaggtcaacaataat
attccgggattttcacatatgatgatggcggagcaagctaaaagcaaagcacgggaggag
aacgtggccacgttccgcggctccgagtacttctgctacgacctgtcccagaaccccatc
cagagcagcagcgacgagatcacgctctccttcaagacgtggcagcgcaacggcctgatc
ctccacacggggaagtcggccgactacgtcaacctggccctgaaggacggggcggtgagc
ctggtcatcaacctggggtcaggggccttcgaggccatcgtggagcccgtcaacgggaag
ttcaacgacaacacctggcacgacgtcaaggtcacgcgcaacctgagacaggtgacgata
tcagttgacggtatcctgacgaccacggggtatacccaggaggactacaccatgctggga
tccgatgacttcttctacgtgggtggaagccccagcaccgccgacctgcctgggtctcct
gtcagcaacaacttcatgggctgcctcaaagaggtggtctacaagaacaacgatatccgt
ctggagctctcccgtctggcccgcatcatagacccgaagatgaagatccagggggacgtg
gtcttcaagtgtgagaacgtggccaccctggaccctatctccttcgagacccccgaggcc
tacatcagcctgcccaagtggaacaccaagagaatgggctccatctcctttgacttcagg
acctcggaacccaacggactcatcctgttcacccacggcaagccccaggaacgcaaggag
gcccaacgcagccagaagaacaccaaggtcgacttctttgcggtggagctcctggatggc
agtctatacctactgttagacatgggctctgggaccatcaaggtcaaagccacccagaac
aaggtcaacgacggggcctggtaccacgtggacatacagagggatgggcgttcaggcacc
atctcagtcaacagccggcgcaccccgttcacagcaagcggtgagagtgagatccttgac
ctggaaggagacatgtacctggggggtctaccctcggaccgtgccaacctcattctgccc
accgagctgtggaccgccatgctcaactatggctacgtgggctgcgtgcgcgacctcttc
atcgacgggcgcagtaaggacatccgacagatcgctgaggctcagaacggggcaggcatc
aagccgtcgtgcaacaaggtggtggggaaacagtgcgagagctacccgtgtaagaacaga
ggcgtctgtaaggagggatggaaccggtttatatgtgattgtaccggcacggggtactgg
tcacgcacctgcgagagagaggcatccatcttgagttatgacggcagtatgtacatgaag
gtggtgatgccccaggtgatgcacacagaggctgaggacgtgtctctacgtttcatgtcc
cagcgggcctacggcctgctcatggccaccacctcacgggactcggccgacacgctgcgt
ctagagctggacgggggccgggtcaagctcacggtcaacctagactgtatcaggataaac
tgtacttccagcaagggacccgagaccctgtatgctgggcaaaaactcaatgataatgag
tggcatacggtgcgcgtggtccgccggggaaaaacctacaagctcacggtggacgatgac
gtagcagaaggccagatggcgggtgaccacacccgtcttgagttccacaacatcgagacg
ggcatcatgacggagagacgcttcgtctcggccatcccctctagcttcatcggacacctg
cagagcctcaggttcaacgggatgctgtacattgatctctgtaagaacggagacatcgac
ttctgcgagctaaacgcccggtttggcatgcgctccatcatcgctgaccctgtgaccttc
aagtccaagagcagctacctgagcctggccaccctgcaggcctacacctctatgcacctg
ttcttccagttcaaaaccacctccccggacggcttcataatgttcaacagtggagacgga
aacgacttcatcgctgtggagctagtcaaagggtacatccactacgtgtttgaccttggc
aatgggcctaacgtcatcaagggtaacagcgaccgggctctccatgacaaccagtggcac
aacgtggtcatcacccgtgacaacagcaacatccacacgctgaaggtggacgccaaggca
accagccaggtggtcaatggagccaaaaacctcgacctgaaaggtgacctgtttattgct
ggactgggccctggtatgtacggtagcctgcccaagctggtggcgtcccgggatggcttc
caaggctgcctggcctctgtggacctcaacggccgcctccctgacctcctccaggacgcg
ctgttccgcagcgggcagatcgagcgaggatgcgaagttggtttcaccaaagctgaccta
caaggtcctagcaccacctgccaagaggactcatgtgccaacatgggcgtctgtatccag
cagtgggagaactacacctgcgactgctccatgacctcctacacaggcactcagtgcaat
gatcctgggatgacttatatctttgggaaaggaggaggcctcattacgttcaactggcca
gccaacgagaggccaagcacgcgcacagacagactgaccatagggttcagtacttcccta
aaggatggcatcttggtccggatagacagtgctccgggtctgggagactatctcatgctc
cacatcgaacaagggaagatcggtgtgacgtttaacatcggcacaatggacatcagtgtg
agagagagcagcacccctgtgaatgacgggaagtaccatgtggtgcggttcaccaggaat
gggggcaacgccaccctccaggtggacaactggtccatcaacgaacactttccaggagcg
acaaccgataatgaacgccttgaaattgccactaagaaattcccattgaaatacgcccgg
ccagtagtggactggctacaagagaaaggtcggcagctaacaatattcaacacccaggcc
acagtcaccatcggtggcagcgaccgcagtcggcccttccagggtcagctgtccggcctc
tactacaacggcctcaaggtcctcaacatggctgccgagagcaaccccaacatcaagatc
aacggcagtgtccgattggtaggcgacgtgccctctgtggccgggtcggctcgcaccacc
gcccagccccccgagatgtccaccacctttattgagaccaccaccaccatgtccaccacc
accacccgcaagcaccgctcctctcccaccatacagcagacaacggatgacatcgtgtcg
tcggcagagtgttcgagtgatgacgaggacctggaggagtgcgactctggccatgcaggt
gggctaggaggtgaattagtgatcccagtactcttagaggaaccgttagtgctgccccct
gtagctactcgtgcaccctccatcccccttcccccaaccctccgcccacccctcaccatt
attgagaccaccaaagagtccctgtccacggccactgaggcgggggtaccttgcttgtcg
gatcgaggcagcgatgattgtgatgatgatgatgatgatggcttggtgatatcggggtat
ggctcaggggaagcgttcaactctaacctgccccctactgatgatgaagatttttacacc
accttctccttggtaacagataagaccttgtccacgtcggcctttgaaggtggctacaaa
gttcatgcgcccaagtgggaaaccaaggactttagctctaacaaaccgtcctcagaacgc
ggtaggactaccactaccgctgcgctgccgctagcccccgaccagagccgctacacctcc
accgcaaccctgcaccacacgccacccgccaagctgcctgccggcaaaatgaataaccgc
gagctaaaaccccagcctgacgtagtgttgctcccgttgcccacactaccctatgaggta
gacagcaccaagcagagggctcctgtaataacctcccccatgttccgtaatgtacccaca
gccctgcccacccagcccggcgtcaaccgagtcccgggacccccggaagtgtcccgccag
tctagcagcaccaccgggatggtcgtcgggatagtggcggccgccgccctgtgcatcctc
atcctcctgtacgccatgtataagtacaggaacagggacgagggctcctaccaggtggat
gagagcaggaattacatcaccaactcggccacgcagagcaatggagccgtcatgaaggac
aaacagcagagcgcaaaaggcagcaaagtaaaacagaaaaacaaggacaaggagtattac
gtgtga
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integrated database retrieval system
