Oncorhynchus tshawytscha (Chinook salmon): 112261526
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Entry
112261526 CDS
T05605
Symbol
tulp4b
Name
(RefSeq) tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112261526 (tulp4b)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
Tubby family proteins
112261526 (tulp4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_ELP1_1st
WD40_Prp19
SOCS_box
WDR55
Aminotran_1_2
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
112261526
NCBI-ProteinID:
XP_024292697
LinkDB
All DBs
Position
LG11:17225813..17238336
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AA seq
1731 aa
AA seq
DB search
MSRNYEPGHSVGMLATVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCQKRYHEEGWLAT
GNGRGVVGVTFTSSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFV
WIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLES
QITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVGMSWNCPCFLVEDST
ESDTDSDDNPPQVRILKPLLTVSFISGDISLMNNYDDLAPTVIRSGLKDVEVQWCSQGDL
LAAAGMERHGLPGVPSDPIVRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRLFL
ACGTALYVVRVEHRVASLQLLCQQGIASALREERDVGKLNMPSLLCSYVTTAFIPTIKPP
IPDPNNIRDFVSYPTAGNERLHCTMKRAEDNPEAGGPCYTLYLEHLGGLVPILKGRRISK
LRPEFIIIDPKTDSKADEVCVNAMISYMTDSCNCSDSSDIELSDEWVGKKSPKLSRGNGS
PKLSRRNMESRKSPKMSRASQEGPRSPRLPTKKPPIRSPSLTRREMSMDGISEHNYLAQV
TSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISLDFMSLPVFN
PNVFSEDEDDLPVMGPSGVTSDNPSCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNI
QLDVLTNPTATASAAAAAAAASASIAGPDHGQNAVAAQYSGTLGRYSNPGQIQQQHQQMQ
RQHQQMQQQLKLQITLPPPPTGYPTISLQQFQVLQQIPHPSAELGPERGEQGHTQSHTLG
RPSLPRSRPPSFIDVDSLRSRPPSFIEADTSRSRPPSFIDIDTIRTRPPSFIDADTGTLR
SRPPSFLDADSSRSRPPSFIDTDTLRSRPPSFLDAETSLEIQMRKVNPPPPYPGTIVSAA
TATTSTAPQTLITNCDNPNILVTADPCLKKDEFSLHPVGLQYQMGYERITTFDSSGNVEE
VCRPRRRLISNQNTYAVQGMGGSATLKVTSSSDSKKVQLPYSSATLSRLSVPRYSIPSRD
PPPYPDPANQVNINTATLSPPQRMDSSHMIHATLRPDRRDVESRLKVSQMVDASRTLPTK
SKINSAALALSYQQRVPTALYTCTQCSSNSSSTSVSVSGGGSSSSGIAGGTVVRQDFPPG
KGAHHSTIIVHSKSTSSQASQSSYNLLSPVDNSRDRTVYVNSAFTEDETLSQQCRHLTLG
EVSLTLKRPPPYQWDPNTAEEFWIPSEQTILAPPPPPTHKPPPPIIFSNAQHLDMTRLPF
VLSTKPPSSPSTVTFPSGYQISMSPFPPGVGQDGTPLQSMQSHPPPCPPNEVVAPVPQFA
QQDPNLVLPPGYPPSHANLACCPLPPMYPGAASCAGLQLHPVSLHPWNPYSLPMQDLSGS
ATLPSKSHQVLEKPVLSPPPPVAPPPPPLTLPPPPPSELPKSKSPTEELAESASSFQEPS
SLNESPVPDRQGSDMFSKKSRKRLDSRAEAANMTTVSEGKSKKEGRALSDFNSLISSPRL
GGREKKKLKGQREQLNKTKKLNRTSTTSEFQDSSESEPELFISGDELMNQSQSSKKGWKS
KRSLRMASELEEIKCRKANEREDRGLGSQGFIYVMANKQPLWNEATQVYQLDFGGRVTQE
SAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaactatgagcctggtcactcagtagggatgttggctactgtggaacatggt
cccatcctctgcagcgactccaacatcctctgcctctcctggaagggccgggtccccaag
agcgagaaggacaagccggtgtgccagaagcgctaccatgaggagggctggctggccaca
gggaacgggagaggggtggtgggcgtgacgttcacatccagccactgcaggagagacagg
aacactcctcagagaatcaacttcaacctgcgaggacacaacagtgaggttgtgttggtt
cgttggaatgagccctttcagaagttggccacgtgtgacatggagggaggcatcttcgtc
tggattcagtatgagggacggtggtctgtagagttagtgaatgaccgtggtgcccaggtg
agtgatttcacatggtcccatgatggcactcaggccttgatcgcctacagggatgggttt
gtcttggtggggtcagtcagcggacagagacactggtcctcagagatcaacctggagagc
cagatcacctgtggcatctggacacctgacgaccaacaggtgttgtttggtacagccgac
ggtcaggtgatagtgatggactgtcatggtcgcatgctggcccatgtcctgctacacgag
tcggatggcatcgtcggcatgtcatggaactgcccctgcttcctagtggaggacagcaca
gaaagcgacaccgactctgatgacaacccacctcaagtgcgtatcctgaagccccttctg
acagttagcttcatatcaggagacatcagtttgatgaacaactacgatgacctcgctcct
accgtcatccgctcaggactcaaagatgtggaggtccagtggtgttctcagggggacctc
ctggcggcagctgggatggagagacatgggctccctggagtcccctctgaccctatcgtg
aggaacgccctggtcaaattctacaacgtccaaggagaacatatctacacgttagaaaca
cctgcccagcgccccatcaccactatctgctggggccacagagactctcgtctgttcctg
gcgtgtggcacggcgctgtacgtggtgcgggtggagcaccgggtggccagcctgcagctg
ctgtgccaacagggcatcgccagtgccctacgggaggagagagacgtgggcaaactaaac
atgccctccttactctgttcctatgtcacaaccgccttcatacccaccatcaagcctcct
attcctgatcccaacaacatccgggactttgtcagctaccccacagctggtaacgagagg
ctgcactgcaccatgaagcgagcggaggacaacccagaggcagggggaccctgttacacc
ctctacctggaacacctaggtggtctggtgcccatcctcaaaggcagacgcatcagcaag
ctacggccagagttcatcatcatagaccctaaaacagacagcaaagcagatgaggtgtgt
gtgaacgctatgatctcctacatgactgacagctgtaactgttcggactccagcgacatt
gagttgagtgacgagtgggtcgggaagaagtcccctaaactgtccagaggaaacgggtca
cccaagctttccaggaggaacatggaatctagaaaatctcccaaaatgtcccgggctagt
caagaaggcccacgatcaccccggttaccaacaaagaagccaccaattcgatctcccagt
ttgacgcgtcgagagatgtccatggatggaatctctgagcataattatcttgctcaagtc
acgtccaatatttgggggacaaagttcaaaatcgttggacttgcttctttcctacctgct
aatcttggtgcagttatctataagaccagtttgctgcatctacaaccaaggcagatgaca
atctaccttccggaggtgcggaaaatatcacttgacttcatgagcctgcctgtctttaac
ccaaacgtcttcagtgaggatgaggatgacttgcctgtgatgggaccatctggagtgaca
agtgacaacccttcctgtacggtcaacatccccatcgcacccatccacagccctgcccaa
gccatgtcccccactcagagcattggactggtccagtccctgctggccaatcagaacatc
cagctggatgtcttgaccaatcccacggctacggcttcagctgcagcggccgctgcagca
gcctcggcctctattgcagggcctgatcacggtcagaatgcagtagcagcacagtacagt
gggactctaggaaggtactccaacccaggacagatacaacagcaacaccaacagatgcag
aggcagcaccaacaaatgcagcagcaactgaagctgcagatcaccttgccccctccgcct
actggctatcccaccatctctctgcagcagttccaggtactgcaacagataccccacccc
agtgcagagttgggaccagaaagaggagagcaggggcatactcagagccatactctgggc
aggccaagtctaccgcgatccaggcctccatcattcattgatgtagacagcttacggtcc
agacctccttccttcatcgaagcagatacatcaagatctagaccaccgtcattcatcgac
atagacacaatacggactagacctccttctttcattgatgcagatacaggtacattgcgg
tctagacccccgtcgttcctcgatgcagactcctcccgatccagacctccttcattcata
gacacagacacactacgttctagacctccttccttcctcgatgcagagacttcccttgag
atccagatgaggaaggtgaaccctccaccaccctacccaggaaccatagtgtctgcagcc
accgccacaacctccaccgctcctcagaccctcatcaccaactgtgacaaccccaacata
ctggtcacagcagacccgtgtctgaagaaagacgagttctcacttcacccagttggtctc
cagtaccagatgggatacgagaggatcacaacctttgacagcagtgggaatgtagaggag
gtgtgtcgccctcgcagaagactcataagcaaccagaacacctacgctgttcaaggcatg
ggaggttcggccacacttaaagtcacctcatcgtctgacagtaagaaagtccagcttcct
tacagctcagcgactctaagccgcctctctgtgccacgatactccatacccagcagagac
ccgcccccctacccagatccagccaatcaggttaacattaacacggcgacactttctcct
ccccaacgcatggacagtagtcacatgattcacgccaccttgcgacctgaccggcgagac
gtggaatctcgcctgaaggtgtcccagatggttgacgcttcaaggactctaccaaccaag
tctaagatcaacagtgcggccctagcactctcttaccagcagagggtgcccacggctctg
tatacctgcactcagtgcagcagcaacagcagcagcaccagtgtcagtgttagtggtggt
ggtagtagcagcagtggcatcgcaggaggcactgtagtgcgacaggatttcccaccagga
aaaggtgctcatcacagcaccatcattgttcattccaaaagcacttcgtctcaagcttct
cagtcatcttacaatctgctgagtcctgttgataacagcagggataggactgtgtatgtg
aactctgcctttaccgaagacgagacattaagtcagcaatgtcgtcacttgactcttggg
gaagttagtttgacactgaaacgtcctccaccataccagtgggatccaaacactgcagag
gagttctggataccctcagaacagactatcttagctcctcctccaccaccaacacacaaa
ccaccacccccgatcatcttcagcaatgctcagcatctggacatgacacggctgcctttt
gtactctcaacaaaacctcccagcagcccaagtactgttactttcccatcaggttaccag
atctccatgtcacctttccctccaggggttggtcaggatggaaccccactccagtccatg
cagagccatccaccaccctgccctcccaacgaagtagttgctccagtcccccagtttgcc
cagcaggaccccaacctggtcttgccacctggataccctcccagccatgccaacctagct
tgctgccctctgcccccgatgtacccaggggccgcctcctgtgctgggcttcagctgcac
cctgttagcctgcacccctggaacccatatagcctacccatgcaggacctgtcaggctct
gccaccctccccagcaagtctcatcaggtgttagaaaagccagtcctctccccacctcct
cctgttgctccccccccaccacctcttacacttcctcctcctccaccaagcgagctgccg
aaatccaaaagccctacagaggagctggcggaatctgccagtagcttccaggagccgtct
tctctaaacgaaagccccgttccagaccgacaggggtccgacatgttcagcaagaaaagt
cgtaaacgtctagacagccgagccgaggcggcaaacatgaccaccgtctcagagggcaaa
tccaaaaaggaagggcgcgccctctccgacttcaactccctcatctccagccccaggctt
ggcggcagggagaagaagaaactcaaaggccagagggagcagctgaacaaaaccaagaag
ctcaacaggaccagtaccaccagcgagttccaggacagttcggagagcgagcccgagctc
ttcatcagcggagatgaactgatgaaccagagccagagctccaagaagggttggaagagt
aagagaagcctgaggatggccagtgaactggaggagattaagtgcaggaaggccaatgag
agagaggaccgtgggctgggcagccagggattcatctatgtcatggccaataagcagcca
ctctggaatgaggccacacaggtctaccagttggacttcggaggacgagtcactcaggag
tctgctaagaactttcagatcgagctggatgggagacaggtgatgcagtttggcagaatc
gatgggaacgcatatatcctggatttccagtatcctttctcagcagtgcaggcctttgct
gttgccttagccaatgttactcaaaggctgaagtaa
DBGET
integrated database retrieval system
