Oncorhynchus tshawytscha (Chinook salmon): 112261556
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Entry
112261556 CDS
T05605
Symbol
cdan1
Name
(RefSeq) codanin-1 isoform X1
KO
K19531
codanin-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112261556 (cdan1)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
112261556 (cdan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
Motif
Other DBs
NCBI-GeneID:
112261556
NCBI-ProteinID:
XP_024292756
LinkDB
All DBs
Position
LG11:18597724..18616975
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AA seq
1418 aa
AA seq
DB search
MLSCFWSAPQGNAVATFARLLPFWSAPNSKQQAECQTAPAQTRMAALLESLLQKEVEAIK
AVEWLKHDGDSDSLAWCKPLKIERQEFVPFLLNFLREQSCSTLTHGPATPAKTPSHPRVS
QPSQQGPGFSSELRGGCRSTGPGTGPRSASRVQLFSSTPSLSPGAEWDTTQPPSGSHCLG
GISALSSPSFSSARSPAPASTSRHTPSERRSTQRASLGDFMPSPPELQHHHSLSLGVQQQ
PRGRRRSAGMGGQGRQGGGRGVFQTEEVGPGRSEGGGRKGRGGGANKMGDPAVSPPMAQM
TTLVQLNLTNLEDFPPMGMSHASPALHTKPSRRINPTPVSAERPHSRPKTCFTSTPFSTR
PSSPPPVPEAVTGAIEGSITGALNVGSPPLSLQEERELLKRVKCKRAEQVGSPLPTSLDP
CTPTKPGLRPVSGSKMTPVTLGSCPDPSKVTLTSELDLLADLYCTCISENLVPNVFLELF
FVLQLLTSRTPAVTEEEDKDLSMGTLDVLERGYLSKVHNCVYFSVRVLENQFELVSHLDK
DTLRLLAENERVTCFSPSLRNRLTLAQDASTAKVSPSVDTFIHSVPFQPATDNRSNFSSD
KAFHTFKKQRDIFYEVLREWEDFHKEPRWEFEAELGNRVRGMVNQLNSTGNHSHFARLFL
KQLVQMCKGPRALGSPGDTPDADLLGMLGADSLGRLKRLEERLIQPQGILGPCPPPAFPG
HQEFFRDFLKTASCCQLNQHLKDSLCQQLLQLDEVSVLAPVVSSTEGEGDMEQQDEKQRF
SSVLLLARLLAKFLGYISFLPYQTSERPSREIQEATANLRSKSMSVLDVCAVLRSCVRRR
RTILTVPWLVEFLSMLDFTGPFLLCYRTVLGLLLSLYRRMVLSREGEVCYLNQLLMVAVL
GWLFQIPVIPEELFFTTDFAVAVELEESQTNVQGLDCLPLVDQQLLYTCCPFLGEFRKLL
AAFVAGSSARGGGLIRKITPTSAELRGTPTTTRSQQKRQVDLEQAFFHNQPPSLRRTVEF
VAERVGSNCVKHMKVTLVCELVRGGERLLREGLISPGANPLILNDSICAQLCDGGQEALE
RATRFCSEKGPEAIRVLLPDETSPAVLTTSENITKRLATEKAYSWLSSNITALVKREWKT
KFDRVMKSLPSPEASGVEGSGLVAGAAAVSQEQSRTPKRDMGKEEAVTSCPPDCPHSAPL
PSDVLVEIKEVLSIAVGPRSEKEALTCLQLNALLGKVGDTLSCKKFSFPMPEQMLIRCTV
LLACKLVSGELPMVSPQEECGRTVSPDPVLLPDSPVQRVGCSIKVLLEQLILLWGRDCCS
SAPLHLLFTEMTLSAVLMASDSQWDNFLFLVRQLVERGILGEEEVVSHWRKLSQLPWPTE
FIEKIQQQSSSTTSLPLPELQNHMDMLQVSPQPVEGAN
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcctgtttctggagcgcgccccagggcaatgcagtagcgacattcgcgcgcctg
ctcccattctggtccgcccccaactccaagcagcaggcagagtgccagacggcgcctgct
cagaccagaatggcggctcttttggaatcgctgctgcagaaggaagtggaagctatcaag
gccgtagaatggttaaaacacgacggggacagtgacagcttggcatggtgtaagccactg
aagatcgaaagacaggagtttgttcctttcctgttgaacttcctgcgagagcagagctgc
tccaccctcacccatggccctgccacacccgccaagacccccagccaccccagggtctcc
cagccctctcagcaggggccaggcttctccagtgagcttagggggggctgcagatctacc
ggacctggaaccggtcctcgtagtgccagccgtgtacagctattctcctccactccctcc
ctgtctcctggggctgagtgggatactacccaacccccatctggctctcactgcctgggt
gggatcagtgccctcagtagtccttccttcagctcagccaggagccctgctccagcctcc
acctccaggcacactccctcagagcgccgctccacccagagagccagtttgggggatttc
atgccgtcacctccagagctccagcaccaccacagtctcagcctgggtgtccagcagcag
ccgcgtggccgcaggaggagtgccgggatgggagggcagggaaggcagggtggggggcgt
ggtgtgttccagactgaggaggtggggccaggaagatctgagggtggtgggaggaaggga
aggggaggaggggctaataaaatgggtgacccagctgtgtcacctccaatggctcagatg
acaacgctggtccagctcaacttaaccaatctggaagacttcccacctatggggatgtcg
catgcatcaccagcactgcatacaaaaccatctcggaggatcaacccaaccccagtcagt
gcagagcggcctcactccagaccgaagacctgtttcacttccacccccttcagcaccagg
ccctccagccctcccccagtcccagaggcagtcactggggccatcgaagggagtatcact
ggggccctgaacgtgggcagcccccctctcagtctgcaggaggagagagaactgctaaag
agagtgaagtgtaaacgagccgagcaggtgggctcccctctacccacctctttggacccc
tgtacccctaccaaaccagggctccggccagtatcgggctccaaaatgacccctgtcacc
ctggggtcgtgtcctgacccctctaaagtcaccttgacctctgaactggaccttctggct
gacctctactgtacctgcatctctgagaacctagttcccaacgtgttcctggagctgttc
tttgtgctgcagcttctgacatctagaacaccagccgtcacagaggaagaggacaaggat
ctaagtatggggacgttagatgtcctggaaagaggctacctcagcaaggtgcacaactgt
gtctacttctctgtcagggtgctggagaatcagtttgagttggtgtctcacctggacaaa
gacaccctgcgtctcttggctgagaacgagagggtgacctgcttctctccgtccctgagg
aacagactgactctggcccaggacgccagcacagccaaggtctcgccctctgtggacacc
ttcatccactctgtcccgttccagcctgccactgacaaccgctccaacttcagcagtgac
aaggccttccacaccttcaagaagcagagggatattttctacgaggtgctgcgagagtgg
gaagacttccacaaggaacctagatgggagtttgaagctgaactaggcaatagggtcaga
ggaatggtgaatcaactgaactccactggaaaccactcccatttcgccagactcttcctc
aagcagttggtgcagatgtgcaaaggtccccgtgctctgggctccccgggcgacaccccc
gacgcggacctgctaggcatgctgggagcagacagcctggggcgtctaaagcgtctggag
gagcgtctgatccagccccaaggcattctgggaccctgtcctccacccgccttcccggga
caccaggagttcttcagggacttcttaaagaccgcaagctgctgccagctgaaccagcac
ctgaaggacagtctgtgtcagcagctcctccagcttgacgaggtgtcggtcctggctccc
gtggtctccagtaccgagggagagggagacatggaacaacaagatgagaagcagcgtttc
tcctctgtcctgctgttggctcgtctcctagctaagttcctgggttatatctccttcctg
ccataccagacctctgagaggccctccagggagatacaggaggctactgccaacctccgc
agcaagagtatgtctgtgctggatgtgtgtgcggtcctgcgtagctgtgttcgtaggaga
cggaccatcttgactgtgccctggctggtggagttcctctccatgctggacttcaccggt
cccttcctcctctgctacaggaccgttctgggactgctgctcagcctatacaggcggatg
gtgctgtccagagaaggagaggtgtgttacctgaatcagcttctcatggtggctgttcta
ggctggctgttccagatcccagtgatcccggaggagcttttcttcacgactgatttcgct
gtagctgtcgagctagaggagagccagaccaacgtccagggacttgactgtctccccctg
gtggaccaacagctcctctacacctgctgtcctttcctcggtgagttccgtaagctcctc
gctgcctttgtggccggtagctctgccaggggtggaggcctcatccgtaagatcacccct
acctctgctgagctgagaggtacccccaccaccaccaggtcacagcaaaaacgacaggtg
gatttggagcaagccttcttccataaccagcctccatctctcagacgaacggtggagttt
gtagctgagagggttggatccaactgtgtcaaacatatgaaggtcacgctggtgtgtgag
ctggtccgtggtggagagaggttgctgagggaggggctgatctcaccaggggccaaccct
ctgatactcaacgactccatctgtgctcagctctgtgacgggggccaggaggctctggag
agagctaccaggttttgcagtgagaagggtccagaagccatccgggttcttcttcctgac
gagacgtctcccgctgttctcactacgtctgagaacatcaccaagcgcctggccactgag
aaggcctatagctggctctcctccaacatcacagccctggtcaagcgagagtggaaaaca
aagtttgaccgtgtgatgaagtctcttcccagcccagaggctagtggtgtggaaggttct
ggtcttgtggctggagctgcagcagtctcccaggagcagtcacgtaccccaaaacgggac
atgggcaaggaggaggctgtgacgtcctgccctccagactgcccccacagtgcaccacta
ccatctgatgtcctggtagagattaaggaggtgttgagtattgctgtaggcccgaggtct
gaaaaggaggcgttaacttgtctacagctgaacgctctactgggaaaagtaggagacaca
ctgagctgcaaaaagttctcattcccaatgcctgaacagatgctgatacgttgcaccgtc
ctactagcctgtaaactagtttcaggggagctgcccatggtgtccccacaggaggaatgt
ggtaggacagtgtctcctgatccagtactactaccagactcaccagtccaaagggtaggc
tgttcaatcaaagtcctgctggagcagttgatcctcctgtgggggagagactgttgttca
tcagcccccctccacctgctcttcacagaaatgacactcagtgctgtcctcatggccagc
gactcacagtgggacaacttcctgttcctggtcagacagctggtagagcgggggattctg
ggagaggaagaagtggtctctcattggaggaagctgtcacagttaccctggccaacggaa
ttcatagagaagatccagcagcagtcctcttccaccacatcccttcctctgcctgagctt
cagaaccacatggacatgttgcaggtctcaccacaacctgtagagggagccaactaa
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