Oncorhynchus tshawytscha (Chinook salmon): 112261557
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Entry
112261557 CDS
T05605
Name
(RefSeq) synaptosomal-associated protein 23 isoform X1
KO
K08508
synaptosomal-associated protein 23
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112261557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112261557
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112261557
Membrane trafficking [BR:
otw04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-23
112261557
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112261557
Exosomal proteins of other body fluids (saliva and urine)
112261557
Exosomal proteins of colorectal cancer cells
112261557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP-25
DUF5089
V-SNARE_C
COG6_N
Exonuc_VII_L
Sec20
Use1
Motif
Other DBs
NCBI-GeneID:
112261557
NCBI-ProteinID:
XP_024292758
LinkDB
All DBs
Position
LG11:complement(18726731..18747064)
Genome browser
AA seq
244 aa
AA seq
DB search
MEWNGGKMNRPQSVELGVTGGTSNFDSSKMADMSVEEITMRANQVTDESLESTRRMLQMA
EESRQTGVNTIEMLDQQGEQLKRTEEGMDQINQDMRQAEKNLTDLSKCCGLCVCPCDRVT
SIEHDSKYKRTWGMGDGGSAGGGEGVDSSVVSTQPAGIRNGQANQQQSMGGPYVKRITND
AREDEMEENLDQVGSIIGNLKNMAMDMGSEIDKQNKHIDRITDKADMNKARIDEANQRAN
KLIK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaacggtggaaagatgaataggcctcagagtgtagagcttggtgtgacagga
ggaacctccaactttgacagcagcaaaatggcagacatgtcagtggaagagatcaccatg
agggccaaccaagtgaccgatgagtccttggagagcaccaggcggatgctacagatggct
gaggagagcaggcagactggtgtcaataccattgaaatgctggaccaacagggggagcaa
ctgaagcgtacggaggagggtatggaccagatcaaccaggatatgagacaggctgagaag
aacctgactgacctgtccaagtgctgtggcctctgtgtctgcccctgtgacagggtaacg
tccatagagcatgactctaagtacaagcgtacctggggaatgggtgatggtggcagtgca
ggtggaggagagggagtggacagctcggtggtgtccactcaaccagcaggcatccgtaat
ggacaggccaaccagcagcagtccatggggggaccttacgtcaagaggataaccaacgat
gctcgggaggatgagatggaggagaatctggaccaggtgggcagcatcataggcaacctg
aagaacatggccatggacatgggctctgagatagacaagcagaacaaacatatcgaccgc
atcacagataaggcggacatgaacaaagcacgtatcgacgaagccaaccagcgagctaac
aagctcatcaagtag
DBGET
integrated database retrieval system
