Oncorhynchus tshawytscha (Chinook salmon): 112261598
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Entry
112261598 CDS
T05605
Symbol
ttc6
Name
(RefSeq) uncharacterized protein ttc6
KO
K24929
tetratricopeptide repeat protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112261598 (ttc6)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
112261598 (ttc6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_9
TPR_16
TPR_14
TPR_12
TPR_19
TPR_CcmH_CycH
ARM_TT21_N
SHNi-TPR
TPR_10
Motif
Other DBs
NCBI-GeneID:
112261598
NCBI-ProteinID:
XP_024292816
LinkDB
All DBs
Position
LG11:22213502..22242160
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AA seq
1943 aa
AA seq
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MKQLFFNSHTTTSTQDQPPDSLHTLESSGLMEEATEGPCGTSDTPQNRTSQMSAGSVSLL
EFHADLLQSPPASLPQSALLLDIPKTKSEVSRSQGTTCIKGISEGRNSVHLVLSSPGQKP
SQKPAIAQLAGTTKVVSMSMRPQPPSKPRSERPATGTRMFIYKSKKESEQVSEKEAAERR
IRRSNFFSRCLALSSDNTDDSRNSEDSGPEPSHGKAPQKVKKKKRRNQKDRSTHAPRTPT
DDRSSKSQRSSMAPNSIHSVKSTTELLEEAQGIVGAEVAESQEDTDPQQRHPEESVATTM
GLVRGRGRTVDEIIASLQRGDSDMPSASDQMIKELMERVLGDSYNAENEEEKTVESEERE
ENISHVPTEDTPQRSPVPQRMLWVKRDSPTPPRPAESPKVTSGVYKIAHSLSERETDGDD
SMVSALPQKVTYADVMTARGDTIAPSQRPARVSLQNKTIQGLSPLATWAPKAHADGYKTI
HHLCTTPVSQALPLELQLASRVCHTSSQLSAPPQFHQQRAALQHIAAQPDRHRILNEGVP
RVEVTESDGKDCVSHLPSQTSDSLADWQRIAEFYVEKPRMMLHGQATSLCSNELKMFWHP
APPKFSCSPAFVKHKLFPKYQATRNDLSREELYGDLQDLVESACDLTEMEPTTSVENVLS
RKFKSMIDLRVIEQSPQPSIDEEQLKRPFSAPHLNPEPEAFLKVSCDFATVTRELEVVRQ
QLSSTVLAEETHPQVTPTVQQEADHQAPAAGPNTEELTPALSQSQLQYRRDRGRVMMAEP
VRGGSISHSKRKVAKGGKKLCPAKLAYIHEKLQEPPRTLIRSESVCQLLPIKPTTCLTEE
PPLPLPLPRYPSLPLVLDFESFASDQGGIPDVLPPREWVRDIWDAWFDQLFPPLEESSST
SKKESDSSKRAPSSSLQSGALKKPGEKVLMLDEIQPLDWVDLSLTLDQGLTTGDLEGEVA
KLTQAIAQQDRPSAFDLCRRGALQKKLGRLNQALEDLNAAISLEPYLLDAYWHRHSIYLL
RNNQNSALDDLNFIIKHTKKHADAFKSKAEIYRVRGETTLAIINYTQAIKCRPEDDDNYF
KRAEMYEKRNEILLAMEDYAKTFTINPGRTDALLTHGLQYFHSCNWMVALSDFTLLLQRD
PSHAIARTYRGRIYAKVGQYQEAIEDFSLAVHLDPNDWLAFYHRGCLLRKRMPDISLQDL
STSVLINDSQENLRAFLHRGLLYTERRQWQQAVFDFEAVIKLDRSVALAHVNLGLIFMLN
MGQNYEAIRMFSNALRVDPTYIRGYICRAQAYRNVNDLKRALKDLTRATHMKPDAQQLYI
MRGQYLCDMEQFDLATFCIQYAAEMNKALGSSPIQQAAVQSFLGNDAKAIACLEAASNNR
SSSPILILLGKTQMKARKFMEAVESFRKALILLSPNETNLYNVSEAAEVFYLTGLCYMAL
ALLLQAFDAFSNAVKINPDYADAYHQRGLCRMRLQQSKSVQDFNRALFINPNLFQVYLSR
AAFYGAKGRYSKAILNCNEAIKIQPKSVRVYLYRGALKFYLKVYKGAVEDLTMALRIDKT
CSFAHYNRGVCYQQLKEYELALRDYGIVLLLPSKKEIDLKVLINRALLYVELSDHHNALQ
DFKAASLRSPEDATIYHALGVYHHRLGQLQESVEAYSQAMQISPFFLDAYVGRGNACMDY
GHTHATKQAQRDFLSALHFNPLCSNARICLAYNFQVFGFFQRAWNQFTVAAEIDSKCWKA
FEGRAVINLQMGNTYAAFQDINMALKHHPVSDQLLTNRGVINQFMGDKANAMKDYQRAIS
LNPKYALAFFNAANLYFYNRQFEQACEHYSQAFELDPEDESAVLNRAITRALLRKVPEAL
QDFSEALRLNPYSSHVFFNRANLYSSLRQYRNAEKDLSQALLLQPNDALVYKLRADVRGH
LGLTDQAMQDYRTAVELQEALEG
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctgtttttcaactcccacacaaccaccagcacacaggatcaaccaccagac
tctctccacacactggagtcatcaggactgatggaagaggctacagagggaccctgtggc
acatcggacacaccccaaaataggacctcacagatgtctgcagggtcagtcagcctgttg
gagttccatgcagatctgctacaatcaccacctgcctccttaccacaaagtgctctccta
ctagacatccctaaaacaaagtctgaggtgagcaggagtcaaggaaccacatgtatcaaa
ggaatcagtgaagggagaaattcagttcatttggtcctgtcttctccaggccagaaacct
tcccagaagccggccatagctcagctagcagggactaccaaagtggtgtccatgtccatg
aggccacagcctccctctaagcccaggtcagagaggccagcaacagggaccaggatgttt
atatacaagagcaagaaggagtcagagcaggtgtcggagaaggaagcagcagagaggcgc
atccggagatccaacttcttcagcagatgtctggctctgagctcggacaacaccgatgac
agcaggaacagtgaggactcgggccccgagccatcccacgggaaagccccacagaaggtc
aagaaaaagaaaaggaggaatcagaaagataggtctacgcatgcaccaaggacgcccact
gacgacagaagctcaaagagccagaggagtagcatggcccctaacagtattcacagtgtc
aagtccaccacagagctgctggaggaggcacagggcattgtaggggccgaggttgcagag
agccaggaggacacggacccccagcagagacacccagaggagtcagtggccacgactatg
gggcttgtcagaggcagagggaggacggtggatgagatcattgcctccttacagagagga
gacagtgatatgccatctgcctcggaccagatgatcaaggagctgatggaaagagtgctg
ggggacagctacaatgctgaaaacgaggaagaaaaaacagtggaatcagaggagagagaa
gagaatattagccatgtaccaacagaggatactcctcagaggtccccggttccacagagg
atgttgtgggttaagagggattctcctacccctccaagacctgctgagtcccctaaagtc
acatcaggggtctacaagatcgctcactcactgtctgaacgagagacagacggcgatgac
tctatggtctctgctcttccacagaaggtgacttatgcagatgtaatgacagctcgagga
gataccatagctccttctcagagaccagcgagggtgtctttacaaaacaaaaccattcaa
ggcctctcccctctagcaacatgggcccccaaagcacatgcagatgggtacaagaccatt
caccacctctgtacaaccccagtcagccaggccctgcctctggagctgcagctggcttcc
cgggtctgtcacacctccagccaactcagtgcaccaccacagtttcaccaacagagggca
gcactacaacacatcgctgcccagcctgacagacacaggatattaaatgaaggcgtgccc
cgcgtggaggtgactgagtctgatggaaaggactgtgtgagtcacctgccttcccagact
tcagacagcctggctgactggcagaggatcgctgagttttacgtagagaagcccaggatg
atgcttcatggacaggcgacctctctgtgttccaacgagctgaagatgttctggcaccca
gcgcctcctaagttcagctgctctcctgcattcgtcaaacacaaactctttcccaagtac
caggcaacgcggaacgatctctccagagaggagctctatggtgatctacaggacctggtg
gaatcagcctgtgacctgacagagatggagccaaccacctcagtggaaaatgtgctgtcc
agaaagttcaagtctatgatagacctcagagtaattgagcagtcacctcaaccctccatt
gacgaagaacagttgaagagacccttctctgccccacacctcaaccctgagccagaggcc
ttcctcaaggtatcatgtgactttgccaccgtcaccagagagctggaggtggttcggcag
cagctgtcctccactgtgctggctgaggagacccatccccaggttactcccactgtccag
caggaggccgaccaccaagcccccgcagcaggccccaacacagaggagcttaccccagcc
ctcagccagagtcaactccagtacaggagggaccgaggcagggtgatgatggcggaacct
gtcaggggaggcagcatatcccactcgaagaggaaggtcgccaagggtgggaagaagctg
tgccctgccaagctggcctacatccacgaaaaactgcaggagccaccacgtactctcatc
aggagtgagtctgtgtgccagctactacccatcaaacccaccacgtgccttacagaggag
cctcccctccctctccccttgcctcgctacccgagcctacccctggtgctggactttgag
agctttgcctctgaccagggtggcatccccgacgtgctccctccccgggagtgggtgagg
gatatctgggatgcctggtttgaccagctcttccccccactggaggagagcagcagcacc
tccaagaaagagtcagactcctctaagagggcccccagcagcagcctccagagcggggcc
ctgaagaagcctggggagaaggtcctgatgctggatgagatacagcctctggactgggtg
gacctgtctctgaccctggaccagggactgaccacaggcgacctggagggagaggtggcc
aagctgacccaggctattgcccagcaggacagacccagcgcctttgacctgtgtcgcagg
ggggcgctgcagaagaaactgggccggcttaaccaggctctggaggatctcaatgccgcc
atttccctagagccctacctgctggatgcttactggcacaggcacagcatttatctgctc
agaaacaaccagaatagtgctttggatgacctgaactttatcatcaagcacaccaagaaa
catgcagatgccttcaagtccaaagcagaaatctacagagtgagaggagagaccaccctg
gctattataaactacactcaggccatcaaatgcagacctgaagacgatgacaactatttc
aagagggcggagatgtacgagaagaggaatgagattctactggccatggaggactatgcc
aaaacgttcaccatcaacccagggagaacggatgctctgttgacccacggcctgcagtac
ttccacagctgtaactggatggtggctctgtctgactttactctgctgctccagcgtgat
cccagccatgccatcgccaggacgtacaggggcaggatctatgctaaggtgggtcagtac
caggaagccatcgaggacttctccctagcagttcacctggaccccaatgactggctggcc
ttctaccaccggggctgtctgctcaggaagaggatgcctgatatttccctccaagacctc
agcacctcagtactcattaatgatagccaagagaacctgagggccttcctgcacaggggc
ctgctctatacggagcgacggcagtggcaacaagccgtgttcgactttgaagctgtgatc
aaacttgacaggtctgtagcgctggcccatgtgaacctgggcttgatcttcatgttgaat
atgggccagaactatgaagccatccgaatgttcagcaacgctttgagggtggaccccacc
tacatcagaggatacatctgccgtgcccaagcctatcgcaatgtcaatgatctgaagaga
gcgctgaaagatctgacacgagccacgcatatgaaaccagacgctcaacaattgtatatc
atgaggggccagtatttgtgtgacatggaacagtttgacctggccacgttctgtatccag
tatgctgcagagatgaacaaagcactagggtcatctcccatccagcaggctgctgtccag
tctttcctggggaatgatgccaaagccattgcctgtctggaggcagcctccaacaaccga
tcttcatctcctatcctcattctcctgggcaagacacagatgaaggcacgcaagttcatg
gaggcagtagagagcttcaggaaagccctgattctgctgagccccaacgaaaccaacctg
tacaacgtctctgaagctgcagaggtcttctatctgactggactctgctacatggcactg
gctctcctgttgcaggcttttgatgcgttcagcaacgcagtgaagattaaccctgactat
gcagatgcgtaccaccagcgtgggctctgtcgtatgcgcctgcagcagtccaagagtgtt
caggacttcaacagagccctcttcatcaaccccaacctgttccaggtgtatctgagccgt
gcagccttctatggcgctaaagggcgctattcaaaggccatcctgaactgcaacgaagcc
attaagatccagcccaagagtgtcagagtctacctgtatagaggagcactcaaattctac
ctgaaggtgtacaaaggggccgtggaggacctgaccatggccctgaggatagacaaaacc
tgctcatttgcacactacaaccgtggagtgtgttatcagcaactcaaggaatatgaattg
gctcttagagactatgggattgtcctcctccttcccagcaagaaggagattgacctgaag
gtcttgatcaatcgtgcccttctctacgtggagctgagtgaccatcacaatgccttacag
gatttcaaagctgcctccttgagaagtccagaggacgccaccatctaccatgccctagga
gtctaccatcacaggctgggtcagctccaggagtcagtagaagcctacagccaggccatg
cagatcagcccgttcttcctagatgcctacgtggggcggggcaacgcctgcatggactac
ggccacacccatgctaccaaacaggctcagagggacttcctttccgccctgcacttcaac
cccctctgctccaacgcacgcatctgcctggcctacaacttccaggttttcggtttcttc
caaagagcctggaaccagttcacagtggcagcagagattgactccaaatgctggaaggca
tttgaggggagagctgtcatcaacctgcagatgggaaacacctatgctgctttccaagac
attaacatggctctgaagcaccatcctgtgtcagatcagctgctgactaaccgaggggtg
atcaaccagttcatgggggacaaagccaatgccatgaaagactaccagagagccatctca
ctcaaccccaagtacgcccttgccttcttcaatgctgctaacctctacttctacaacagg
cagtttgaacaggcctgtgagcactacagccaagcatttgagctggacccagaggatgag
tctgcggtgctgaaccgggccatcaccagggctctgctgaggaaggttccagaggccctc
caggacttctctgaggccctgagactcaacccttattcctcacacgtgttcttcaaccga
gccaatctctacagctccctgcgccagtacaggaatgcagagaaggacctcagtcaagct
cttctcctccagcccaacgatgccctggtctacaagctccgtgctgatgtcagaggccac
ctgggcttgactgaccaagcgatgcaggactatagaacagcagtggaactccaagaggca
ctggagggctga
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