Oncorhynchus tshawytscha (Chinook salmon): 112261624
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Entry
112261624 CDS
T05605
Symbol
aqr
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112261624 (aqr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112261624 (aqr)
Spliceosome [BR:
otw03041
]
Complex B
Other components
Prp19-related factors
112261624 (aqr)
Complex C
112261624 (aqr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
DEAD
AAA_16
AAA
UvrD_C_2
Parvo_NS1
SLFN-g3_helicase
AAA_22
PhoH
Raptor_N
DnaB_C
RecA_N
nSTAND3
NB-ARC
ATPase
Motif
Other DBs
NCBI-GeneID:
112261624
NCBI-ProteinID:
XP_024292863
UniProt:
A0A8C8G4A1
LinkDB
All DBs
Position
LG11:27289976..27347521
Genome browser
AA seq
1483 aa
AA seq
DB search
MENQTHAKKASAPSVSQINAEYVTQLSNRYWAPHAKNKLPFDPKVLEDVYEREILKSKFA
IRKIMLLEFSQYLENYLWVNYNPEVSSNAYLMSICCIVNEKFRENVPAWEVFKKEPSHFP
YFFKCVMEAVLAGEEAGLTLKEQTVLLVFLDHCFNSLEVDLIREQVQQLISLPMWMCILP
SRLQHELKKVPKLQKFWNLIKKNFDKLEGKASEQAKMERTFLSALIKKFLGVLVSISPAG
PVPMEKVHYCERFIELMIDLEALLPTRRWFNTVLDDSHLVVSCHLSSLMQREKEGHLFCQ
LLDMLKFYTGFEINDQTGNALTEKEMTTLHYDRITSLQRAAFAHFPELQDFALSNVAAVD
TRESLTKQFGHLSSNTLHRVASYLCLLPELAEGQDTTYEKEVLLELLVSRHERRISQIEQ
LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
IRQDVEDVVTRMKPWQSEYGGVVFGGWARMAQTITAFSIVEVAKPNIGENWPARVRADIT
VNLNVRDHIKHEWEGLRKHDVCFLVTVRPNLPYGTRFDRRQPFVEQTGLAYVRGCEVQGM
LDDKGRVIEEGPDPKPKLRGDTRTFRVWLDPNQYQQDMTSSIQNATEDPYESFNIIMRRK
PKENNFKAVLETIRNLMNTECVVPEWLHDIILGYGDPGSAHYSKMPNQISSLDFNDTFLS
IDHLRSCFPGYTVKVTEDNPELQIPPFRIKFPVQNKVDKGKKRKADSEEKKEEEKTLIVE
PHVTPNRGPYPYNQPKRNTIQFTPTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNL
YHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRMGHGEEALETEKDFSRYGRVNY
VLARRLELLREVGRLQESLDVPGDVSYTCETAGHFYLYQVMSRWEEYMSKVRSKQGCPVE
AEAVAAHFPFHKYFSNAPQPVFYGRSYEEDMDIAEGCYRHIKKIFTQLEEFRAFELLRSG
LDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPLLLQN
PEDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTVDLDAQGRAR
ASLCNLYNWRYKQLGNLPHVQLLPQFQAPNPGLTFDFQLINVEDFNGVGESEPNPYFYQN
LGEAEYCVALFMYMRLLGYPADRISILTTYNGQKHLIRDVINQRCAGNPFFGQPNKVTTV
DRFQGQQNDYIILSLVRTRAVGHLRDVRRLVVAMSRSRLGLYIFGRVSLFQNCFELTPAF
NQLTARPMKLHIRPNEYYTQGQPREPRSSQPDQAIKNMPEMANLVYNMYIHMIQSTQQYR
QQQQKLLPPPRQTQAEEDQSEPPVEVENQEETPVEVENKEDTPVEVENQEETPMEQEPSG
EAGTEKTPQETPEKVQEEHPKMPEHPGRDSDSDGEESDEAEAP
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaaacccatgctaagaaagcatctgcgccctctgtgtcccaaatcaacgca
gaatatgtcacacagttgtctaacagatactgggctccccatgccaagaataaactacca
tttgacccaaaggttttggaggatgtctatgagagagagattctcaagtccaagttcgcc
attaggaagatcatgttgttggagttcagtcagtacctggagaactacctgtgggtgaac
tataatcctgaggtctccagtaatgcctacctcatgtccatctgctgcatagtcaatgag
aagttcagagagaacgtccctgcctgggaggtgtttaagaaggagcctagccacttcccg
tacttctttaagtgtgtgatggaggccgtgctggctggagaggaggctggcctgactcta
aaggagcagactgtactgttggtcttccttgaccactgcttcaacagcctggaggtggat
ttgatcagagagcaggtgcagcagctcatctcactgcccatgtggatgtgtatcttgcct
tctagactgcaacacgagctgaagaaagttcccaagctccaaaagttttggaatctgatc
aagaagaattttgacaagctggaaggcaaagcatcagagcaagctaagatggagaggacg
ttcctctctgctctcattaagaagtttcttggtgttctggtgtccatttccccagcaggc
cctgtacccatggagaaggtgcactactgcgagaggttcatcgagctcatgattgacctg
gaggccctgctgcccaccaggcgctggttcaacacggtgctggacgactcccacctggtg
gtgagctgccacctgtccagtctcatgcagagagagaaggagggtcacctcttctgccag
ttactggacatgctgaagttctacacaggctttgagatcaatgaccagacgggcaacgcc
ctgacagagaaggagatgaccacactccactacgacagaatcacttcactgcagagggct
gcatttgcccatttcccagagctgcaggactttgccctgtccaatgtggcagcagtggac
acacgggaatcccttacaaaacagtttggtcatctcagttccaacactctccacagggtg
gcctcgtatctatgcctcttaccagagctggcagagggacaggacaccacctatgagaag
gaggtcctcctggagctgctggtgtctcgtcatgagaggagaatctcccagattgagcaa
cttaatcaaatgcctctttatccaacggagaagattatctgggatgagaacatcgtcccc
actgagtactattctggcgaaggttgtctggctctgccgaagctgaatctgcagttcctg
accctccatgactacctgctgagaaacttcaacttgttccgtctggagtccacctacgag
atcagacaggatgtggaggacgtggtgactcgcatgaaaccatggcagtcagagtatggt
ggtgtggtgtttgggggctgggccagaatggctcagaccatcacagccttctccattgtg
gaggtggccaagcccaacatcggcgagaactggcctgcccgcgtccgagcggacatcact
gtcaatctcaacgtacgagaccacatcaaacacgagtgggaagggctgcgtaagcacgac
gtttgctttctggtcacggtgcggcccaacctgccctacggcacgcgctttgaccgccgc
cagccctttgtggagcagacaggcctggcttacgtgaggggctgcgaggtgcagggcatg
ctggacgacaaaggccgtgtcatcgaggaaggccctgaccccaagcccaaactgagagga
gacaccaggacattcagagtgtggctggaccctaaccagtaccagcaggatatgaccagc
agtattcagaacgccactgaggacccctacgagtccttcaacatcatcatgagacgcaag
cccaaagagaacaacttcaaggctgtactggagacgatcaggaacctgatgaacactgag
tgtgtggtcccagaatggctccatgacatcatcctgggctacggtgacccaggctccgcc
cactactccaagatgcccaatcagatctcctccctggacttcaatgacaccttcctgtcg
atcgaccacctgaggtcctgtttccctggttacactgtcaaggtcaccgaggacaaccct
gagctgcagataccccctttcagaatcaagttccctgtgcaaaacaaggtagacaaaggc
aagaagaggaaggcagactctgaggagaaaaaggaggaagaaaaaacgcttatagtggag
cctcacgtcacgcccaaccggggaccctacccctacaaccagcccaaacgaaataccatc
cagtttacaccaactcagattgaggccatccgcgctgggatgcagcctggactgaccatg
gtggtgggtcctccaggtacaggaaagaccgacgtggccgtccagatcatctccaacctc
taccacaacttccctgagcagagaaccctcatagtcacacactccaaccaggctctgaac
cagctgtttgagaagatcatggctctggacatagacgagcgtcacctcctgcgtatgggc
cacggagaggaggcactggaaaccgagaaggacttcagcaggtatgggcgtgtgaactac
gtgctggccaggaggctggagctgctccgagaggtgggtcgtctgcaggagagtctggat
gtccctggagacgtgtcctacacctgtgagaccgccggacacttctacctctaccaggtg
atgtctcgctgggaagagtacatgagcaaggtccggtctaagcagggctgtccggtggag
gccgaggccgtggcagcacacttccccttccataagtacttctccaacgccccccagcct
gtgttctacggtcgctcctacgaagaagacatggacattgcagagggctgctaccgacac
atcaagaagatctttacccagctggaggagttccgggcctttgagctgctgaggagtgga
ctggaccgttccaagtacctgctggtgaaggaggctaagatcatcgctatgacctgcacc
cacgctgccctcaaacgccatgacctggtagagctgggcttcaagtatgacaacatcctg
atggaggaagcagctcagatcctggagatcgagaccttcatccctctcctgctgcagaac
ccagaagatggttacagcaggctgaagcgttggatcatgataggagaccaccaccagctg
ccccctgtcattaagaacatggccttccagaagtactccaacatggagcagtccctgttc
acccgcttcgtacgtctaggggtgcccaccgtcgatctggacgctcagggacgtgcccgc
gccagtctgtgtaacctgtataactggcgctataagcagctggggaacctgccccacgta
cagctcttgccccagttccaggcccccaaccctggcctgaccttcgacttccagctaatc
aacgtggaggacttcaacggagtgggagagtccgagcccaacccttacttctaccagaat
ctcggtgaggcagagtactgtgtggctctgttcatgtacatgcgtctgttgggttaccct
gccgacaggatcagcatcctcaccacctacaatggacagaaacacctcatcagagacgtc
atcaaccagcgctgtgctgggaaccccttctttggacagcccaacaaggtgacgactgtg
gacaggtttcagggtcagcagaatgactacatcatcctgtcactggtccgcaccagagct
gtgggacatctgagggatgtgagacggttggtagtagccatgtccaggtccagacttggc
ctctacatctttggacgggtcagtctgttccagaactgctttgaactgactcctgccttc
aaccagctcactgccagacccatgaagctccacatcagacccaatgaatattacacccag
ggacagcctagagagcctcgttcgtctcagcccgaccaggcgatcaagaacatgccggag
atggccaacctggtgtacaacatgtacatacacatgatccagagcacccagcagtacaga
cagcaacagcagaagctcctgcctccccctcggcagacacaggcagaggaggaccaatcc
gagcccccagttgaagtggagaaccaggaagagaccccagttgaagtggagaacaaggaa
gatacgccagttgaagtggagaaccaggaagagacaccgatggagcaggagccctccggg
gaggccggcacagagaagaccccacaggagacaccagagaaggtgcaagaggagcacccc
aaaatgccagagcaccctggccgagatagcgacagtgatggagaggagagtgacgaagcg
gaagcaccttaa
DBGET
integrated database retrieval system
