Oncorhynchus tshawytscha (Chinook salmon): 112261640
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Entry
112261640 CDS
T05605
Name
(RefSeq) growth/differentiation factor 6-A-like
KO
K20013
growth differentiation factor 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112261640
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112261640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112261640
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Transforming growth factors (RSTK binding)
112261640
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
112261640
NCBI-ProteinID:
XP_024292885
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All DBs
Position
LG11:complement(28164611..28170420)
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AA seq
473 aa
AA seq
DB search
MILTQSKEQGEFPKSSNPSNFLIYSYRPLKMDPIRAAVPLLWLSLCFGNILEAAVLGSLQ
YPSGADDNGLVSHLDERSRREPTAVSRKDPPINDTIVPHEYMVSLYRTLSEIESRGLNSS
APRTARLANTVTSFVDQGKDHSSWGSGQRYLFDLSSLSRTDELVEAELRILRKPPLDLLP
VLTWGRNLYRLLLYTCSSEGNSGRRLLDSRTVDVLDGEPPKWDVFDVWASVKARRRSHRT
AAGNDLLVACFDLLVVSELTKEAANPLTVGLQRQSRQPQERALLVAFSRTRRKENLFKEI
REQIKAVRGDMGFLDPLDLSGDVVGHLSRRRRRRTALTSRSIGGAGGGGGGGVGVGGGGR
SGGGSGRRKTRCSRRQLHVNFKELGWDDWIIAPLDYEAHHCEGVCDFPLRSHLEPTNHAI
IQTLMNSMDPDSSPPSCCVPSKLSPISILYIDSGNNVVYKQYEDMVVESCGCR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgatattaacacaatctaaagagcaaggggagtttccaaagtcatcaaacccgtccaac
tttctcatttacagctatagaccactgaaaatggatcctattagggctgctgttcctttg
ctatggctttccctgtgctttgggaatattctggaggcagcggtacttggatcattgcag
tacccctccggtgcggatgataacgggcttgtatcacatctggatgagcggagtcgcaga
gagccgacagcggtgtccaggaaagaccctccgataaatgatactatcgtcccccatgag
tatatggtatctctatacaggacactatctgagatagagagcagagggcttaacagcagt
gctcctcgcaccgcaagactcgccaacaccgtgaccagtttcgtggatcaaggaaaagat
cactcctcctggggaagtggccagcgctatctcttcgatctctccagtctgtccaggact
gatgagcttgtggaggcagaactgaggatcctgagaaagccaccgctggatctccttcct
gtgctgacatggggcaggaatctttatcgcctcctcctctacacttgttcgtctgagggg
aactctggaagacggctgctggattccaggacagtcgacgttctggatggcgagcctccc
aaatgggatgtatttgatgtgtgggcaagcgtgaaggctcgacgaaggagccacaggaca
gcagcgggcaatgacctccttgtggcctgctttgacctgctggtcgtttcggagttgacc
aaagaggcagccaaccctcttacagtagggctgcaacgccagtctcggcagccccaggag
agggccttgctggtggctttttctcgcacccgcaggaaagaaaacctgttcaaggagatc
agggagcagataaaggcagtgcgaggagacatgggttttctggatcctttggacctctct
ggtgacgtggttggtcacctatccaggcgtcgcagacgccggactgccctgaccagcaga
tctataggtggagctggtgggggaggaggaggaggcgtcggtgttggaggaggaggaagg
agtggtggaggcagcgggcgcaggaagactcgatgcagccgcaggcagctccacgtcaac
ttcaaggagttgggctgggacgactggatcatcgcaccgctggattacgaggcgcaccac
tgtgagggcgtgtgtgactttccgctgcgctcacacctggaaccaacaaatcacgccatc
attcagacacttatgaactctatggaccctgactccagcccgcccagctgctgtgtcccc
tccaaactcagccccatcagcatcctctacattgactctggcaacaatgtggtctacaag
cagtatgaggacatggtggtggagagctgtggctgcaggtag
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