Oncorhynchus tshawytscha (Chinook salmon): 112261644
Help
Entry
112261644 CDS
T05605
Name
(RefSeq) all trans-polyprenyl-diphosphate synthase PDSS2 isoform X1
KO
K12505
decaprenyl-diphosphate synthase subunit 2 [EC:
2.5.1.91
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00900
Terpenoid backbone biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112261644
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
otw01006
]
112261644
Enzymes [BR:
otw01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.91 all-trans-decaprenyl-diphosphate synthase
112261644
Prenyltransferases [BR:
otw01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112261644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
112261644
NCBI-ProteinID:
XP_024292895
LinkDB
All DBs
Position
LG11:complement(28194791..28246723)
Genome browser
AA seq
383 aa
AA seq
DB search
MTVIWSRLSCIVLLNRGQRNISLFSNTTPSNWNKVVSDAEKIVGYPTSFMSLRCLLSDEL
SNVAMHVRKLVGTKHPLLNTARGFVYDSRNNLQMRGLVVLLMSKAAGPSQHTASDLLPQD
MVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKEWTNSDGPLKDMQFGNKMAVLSGDFLL
ANACTGLAQLNNTKVVELISSAIGDLVQGIYHEMPNSLEDKSLTDDINMVTWEEQRFLSH
GALLAKSCQAAMELAKHDKDAQGLAYKYGKHLSLGHKLNSDLQPFVKNSSAGPVTFSLNS
APVVFHRQIVGQERWRYQLQQAKTIGTVDYTKLRSMIKLEEGVTSTMDLCRYHGNKALES
IQCFPSSEARSALENIASTVTKF
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaatttggtctcggctctcatgcattgttttgctaaaccgtggacagaggaac
ataagtcttttctccaacacaacgccttctaattggaataaagtggtctcggatgcagag
aaaatcgtgggttatccgacttcttttatgagcctacgctgcttgctgagtgatgaactc
agtaatgtagcaatgcacgtgaggaaactggttggaacaaaacacccgttactcaacact
gcaaggggcttcgtctatgacagtagaaacaaccttcagatgaggggtctggtcgtccta
ctgatgtccaaggcagccggtcccagccagcacacagcctcagacctcctcccccaggac
atggtcagtggcatctaccccagccagcggaacctggctgaaatcacagagctcatccac
acggctttcctggtgcaccgtgggattgtcaacctcaaggagtggaccaactcagacgga
cccctgaaggacatgcagtttggaaacaagatggccgttctcagtggggacttcttgctc
gctaacgcctgcaccggactggcccagctaaataatactaaggttgtggagttgatctca
agtgccattggtgacttggtgcagggaatctaccatgagatgcccaacagtttggaggac
aagtccctgactgatgacatcaacatggttacgtgggaggagcagaggttcttgtcccat
ggtgccttgctggcgaaaagctgtcaggcagcgatggagctcgccaaacatgacaaagat
gcccaaggactggcctacaaatacggcaagcatctatcactgggccacaagttgaactct
gacctgcagccatttgtgaagaacagttcagcaggcccagtaacattcagtttgaactct
gctcctgtggttttccaccggcagattgtggggcaggagagatggcgttatcagctgcaa
caggcaaaaactattggaactgttgactatacaaagctgcggtccatgatcaagttggag
gaaggtgtcacctcaacaatggacctgtgtcgttaccacggcaacaaagctctggagtcc
atccagtgttttccttcctctgaggcacgctcagctttggagaacatcgctagcactgtc
acaaagttctga
DBGET
integrated database retrieval system
