Oncorhynchus tshawytscha (Chinook salmon): 112261656
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Entry
112261656 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112261656
04082 Neuroactive ligand signaling
112261656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112261656
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112261656
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
112261656
NCBI-ProteinID:
XP_024292917
UniProt:
A0A8C8F5L0
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Position
LG11:28587621..28627839
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AA seq
456 aa
AA seq
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MSKRLDLSHYLAVFFSMMVLWQSRSRVESSAYASEAFKNNITLFTRILDSLLDGYDNRLR
PGLGDRVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQSWIDERLKFNGPMNILRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRIMEDGTLLYTMRLTVQAECPMHLEDFPMDSH
SCPLKFGSYAYTMAEVTYIWTRNASASVEVAGDGSRLNQYHLQGQTVGTETIKSSTGEYT
VMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNVKKKEAS
VTKKNNAYAVAVANYAPNIIKDQGGMPTISKSATSDPNKAKPEVKPEQNKKTFNSVSKID
RMSRIMFPVLFSGFNLVYWATYLNREPVIKDMVPSK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcggttggatttatcacattatctagcggtgttcttctcgatgatggtactg
tggcagtcaagatcaagagtggaatcatcggcatatgcttcagaagccttcaaaaacaac
atcactctgttcacccggatcttggacagccttctggatggctatgacaaccgattacga
cctggacttggcgatcgggtgacagaggtgaagactgatatttatgtcacaagttttggt
ccagtgtcagacacagacatggaatacactgtggacgtgttcttccgtcagagctggatt
gacgagcgactgaagttcaatgggccgatgaatatcctgcggctgaacaacctgatggcc
agtaagatctggacgccagataccttcttccacaatgggaagaaatctgtcgctcacaac
atgaccatgcccaacaaactgctccggatcatggaggatggaacactgttgtacactatg
aggttaacggtccaggcggaatgtcccatgcacctcgaagacttccctatggattcccac
tcctgtccactgaagtttggcagctatgcttacacaatggctgaagtgacgtacatttgg
actcgaaatgcatcagcgtcagtggaggtagcaggagatggatccagactgaaccagtat
caccttcagggccaaactgtcgggacagagaccattaaatcaagcacaggtgagtacacc
gtcatgacagcccacttccacctgaagaggaagattggctactttgtgatccagacttac
ctgccctgcatcatgaccgtcatcctctcccaggtctccttctggctcaaccgagagtct
gtacccgccagaactgtctttggtgtgaccactgtgctcactatgacgactctcagtatc
agtgcccgtaactctctgccgaaggtggcctacgccacggccatggattggttcatcgca
gtatgctacgcctttgtgttctctgccctcatcgagtttgctacagtcaactacttcact
aaaagaggctgggcctgggacggcaaaagtgtggtcaacgtcaagaagaaggaggcatcc
gtcacgaagaagaacaatgcctacgctgttgccgtggcaaactacgctccaaacatcatc
aaggaccaaggtggtatgcccaccatctccaagagtgccacctctgaccccaacaaggcc
aagccagaggtcaagcccgagcagaacaagaagaccttcaacagcgtcagcaaaatcgac
cgtatgtcccggatcatgttccctgtgctcttcagtggttttaacctggtctactgggcc
acctacctgaacagagaaccagtcataaaggacatggtcccgtccaaatga
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