Oncorhynchus tshawytscha (Chinook salmon): 112261665
Help
Entry
112261665 CDS
T05605
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112261665
Membrane trafficking [BR:
otw04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112261665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
LRR_5
ig
Ig_2
LRR_9
V-set
LRRNT
LRRCT
Big_6
Ig_C17orf99
Big_2
LRR_6
Motif
Other DBs
NCBI-GeneID:
112261665
NCBI-ProteinID:
XP_024292931
LinkDB
All DBs
Position
LG11:28813043..28846129
Genome browser
AA seq
611 aa
AA seq
DB search
MRRSALYHCYPLLGGAVLLLLVSCVLGCPARCDCSAQTKSVSCHRKRLPTIPEGIPIETR
LLDLSKNKLRSITPDNFSSFLQLEDLDLSDNLIGVVEPGSFKFQLSLRSLNFHSNLLQLV
PAGVLSGLANLTSLDLSHNRLVVLLDHGFQDLRKLMSLEVGDNELVFISQRAFTGLLGLQ
SLTLERCNLTVVPTDALGHLHSLVELRLRHLGIGALKPYSFKRLPHLRHLEIDYWPWLEV
FPALSLHGLNLTTLTVTNTNLSSFPGPALRNLPYLTHLNLSFCRIQHIQQGVLDKLPRLQ
ELHLRGAQLAYIEPLAFLALPNLRMLDVSHNQLDSVEQAVFASPDSLQTLLMGGNPLVCD
CRLLWLLSGRKPPLLQLPDPQPECSAPERIRGKPLRDLKEPLVSRYVTCTKPRIGPNTTQ
LLLTEEGQPVWLNCIADGAPRPSMAWVTPHRRYVTAKSTGRVTVHTNGTLEIKAAELHDN
GVYLCVASNAAGNASMSASLAVKSLGISDRSLYTNKSGLLADSNGTWANGTLLYNMTNPI
DLKTIIISTAMGCLSFLGVVIFCFLLLFAWSRGKGRHKSNFDIEYVPRKSNGTAAEANET
SGPRRVNMKMI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgctctgccctgtaccactgctaccctcttctgggcggggctgtactgctcttg
ctggttagctgcgtcctgggttgccccgctcgctgcgactgctccgcccagaccaagtca
gtcagctgccaccgcaaaagactgcctaccatccccgagggcatccccattgagactcgg
cttctggatctgagcaagaacaaactgcggagcattacaccggacaacttctcctccttt
ctacagctcgaggatctagacctcagcgataacctgataggcgtggtcgaaccgggctcc
ttcaaatttcagctttccctgcgctcgctgaacttccacagcaacctcctccagctggtc
cccgccggtgtgctctctggcctggccaatctcaccagtctggacctcagccacaaccgg
ttggtggtgctgctggaccatggcttccaggaccttcggaagctgatgtctctggaggtg
ggtgacaatgagctggtgttcatctcccagagggcctttactggcctgctgggcctacag
agcctcaccctggagcgctgcaacctgactgttgtgcccactgatgccctggggcaccta
cacagcctggtggaactccgcctgcgccacctgggcattggtgccctgaagccctactcc
ttcaaaagacttccccaccttcgccacctggagattgactactggccctggctggaagtc
tttcccgctctgtcgctacacggtctcaacctcaccacactcaccgtcaccaacactaac
ctgtcctcttttcccggccctgctctacgcaacctgccctacctcacgcacctaaactta
tccttctgccgcatccagcacatccagcaaggggtgctagacaagcttccgcgactgcag
gagttgcacctgcgaggggctcagctggcttacattgaacccctggccttcctggcacta
ccaaacctgcgcatgttggatgtgtcgcacaaccagctggactctgtggagcaagctgtg
tttgcgtcccctgacagcctgcagacgctgcttatgggggggaaccctctggtgtgcgac
tgccggctcctatggctgctgagtggccggaagccacccttgctgcagctccctgacccc
cagcccgagtgcagtgcccctgagcgcatccgtgggaaacccttgcgggacctcaaggag
ccgctggtgtcacggtatgtgacctgcaccaagccacggatcgggcccaacaccacccag
ctgctgctgacagaagaggggcagcctgtctggctcaactgcatagcagacggagctcca
cggccatccatggcctgggtgacgccacacagacgctatgtcacagccaaaagcaccggg
agggtgacagtccataccaacggcaccctggagattaaggctgcggagctgcacgacaat
ggtgtgtacctgtgtgtggccagtaatgcggcgggcaatgccagcatgtcagcctcgctg
gctgtgaagagcctgggcatcagcgatagatcgctctacaccaacaagagcggactcttg
gcggactccaacgggacctgggccaacggcaccctcctgtacaatatgacaaaccccata
gacctgaagaccatcatcatctccacagccatgggctgcctgtctttcctgggcgtggtc
atcttctgtttcctcctcctgtttgcctggagtcgtgggaagggaaggcacaagagcaac
ttcgacattgagtacgttccccgcaaatcgaatgggacagcagcagaggcaaatgaaaca
agcgggcccagacgagtcaacatgaaaatgatttaa
DBGET
integrated database retrieval system
