KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112261671
Entry
112261671         CDS       T05605                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112261671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:otw03041]
    112261671
   03400 DNA repair and recombination proteins [BR:otw03400]
    112261671
Spliceosome [BR:otw03041]
 Complex B
  Other components
   Prp19 complex
    112261671
 Complex C
   Prp19-CDC5 complex
    112261671
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    112261671
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4072 Rap1_C
Other DBs
NCBI-GeneID: 112261671
NCBI-ProteinID: XP_024292952
LinkDB
Position
LG11:complement(29035808..29055941)
AA seq 806 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEDTADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGINAQKKRKKKRGVDYNAEIPFEKKPSQGFYDTSMELYEGLEPNFK
RLRQQHLDGELRNEKEEKERKRDRQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEVARQTAEESGITNSASSALLSEYSLTNSAMATGLRTPKTPAA
QDKILQEAQNLMALTNVDTPLKGGLNTPLHQSDFSGVTPQRQAVQTPNTVLTTPFRTPGP
GSEGSMTPQGGLTPKGPGTVTPGVTPGRTPLRDKLNINTEEQLADPAYAKHLQRESREQL
KLGLMSLPVPKNDFEIVLPENAETQLEEMETETGYIEDASEIELRRQAVRDAEREKELKL
RHTAVQRTLPRPSEVNESILRPMGTDPLSELQHAEEMIKKEMITMLHFDCLHHPPANQQR
SKQRGPSSTSNNAEHIAHLDRHPYQPISNEDLAQASEMLSQEMEVVRAGMGHGDLSMEAY
SQVWEECYGQVLYLSAQSRYTRANLASKKDRIDSLEKKLEINRGHMTCEARRAARLERRL
KVLLGGYQSRAVGLLKQHGELWEQVEQAATELHTFTELKKQEDTAIPRRQEALREDVERQ
QEREKELQQRYGDLLLEKDALLSAKF
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgccgcgtataatgatcaaggggggtgtatggcgaaataccgaggatgagatcctgaag
gcagcggtgatgaaatatgggaagaaccagtggtctcgtattgcctccctgctgcaccgc
aagtctgccaagcagtgcaaggcccgctggtatgagtggttggatccaagcattaagaaa
actgagtggtccagagaggaagaggagaaactactccatctggccaagctgatgcccacc
cagtggaggaccattgctcctatcataggacgcaccgctgcccagtgtctggagcactac
gagttcctgctagacaaagcggcccagagggacaatgaggaggatacagctgacgatcca
aggaaactgaaacctggtgagatcgaccccaaccctgaaaccaagcccgctaggcctgac
cctgtggacatggatgaagatgaactggagatgctttctgaggccagagctcgtctggcc
aacactcaggggaagaaagctaagaggaaagccagagagaaacagctggaggaggccaga
cgtctggctgctctacagaagcgcagggagttgcgggccgcaggcatcaatgcccagaag
aagaggaagaagaagagaggagtggactacaatgctgagatcccttttgagaagaagcct
tctcagggtttctatgacaccagcatggagctctatgaaggtctggaaccaaacttcaaa
cgcctgcgacaacaacacctggatggagagctacgcaatgaaaaggaagagaaggagagg
aagagggatagacagaagatcaagaagaagaaggagagtgatcttccatcagccatcctg
cagaccagcggagtagcagagttcaccaagaaacgcagcaaactggtgctgcctgcaccg
cagatctctgatgcggagctggaggaggtggtgaagctgggtcaggccagtgaagtggct
cgtcagaccgcagaggagtctgggatcactaactctgcctcctcagccctcctatcagaa
tacagcctcaccaacagcgctatggcaactgggctacgcacccccaagacccctgctgca
caggacaagatactacaggaggcccagaaccttatggctctgactaacgtagacactcct
ctgaaaggaggtctgaacactcctcttcaccagagtgacttctcaggagtcacaccccaa
agacaggcagtacagacacctaatactgtactgaccacacctttcaggacccccggtccg
gggtcagagggcagtatgaccccccagggaggtttaacccctaaaggacccggtactgtt
acccctggagtaaccccgggacgcacccctctacgagacaaactcaacatcaatactgag
gaacaactagcagatcctgcctacgctaaacatctgcaacgagagtcgagggagcagctg
aagctgggtctgatgtcgctgccagtcccgaagaatgactttgagattgttctaccagaa
aatgcagagactcaactggaggaaatggagacagagaccggatacatagaggatgcctcg
gaaatagagctacgcagacaggctgttcgggacgcagagagggagaaagagctgaagctg
agacacactgctgtacagaggactttacccaggccatcagaggtgaatgagtccatcctg
cgtccaatgggaacagatcctctgtcagagctgcagcatgctgaggagatgatcaagaag
gagatgatcaccatgctgcactttgactgtctacaccacccaccagccaaccaacagcgc
agcaaacaacgagggccttcttccacctccaacaacgcagaacacatcgcccacctggac
agacacccctaccagccaatcagcaatgaggatttggcacaggccagtgagatgctgagc
caggagatggaggtggtgagggcaggtatgggtcacggggacctgtccatggaggcctac
agccaggtgtgggaggagtgttacggccaggtgctgtacctctccgcccagagccgctac
accagggccaacctggcctccaagaaggacagaatagactccctggagaagaaactggag
ataaaccgaggccatatgacatgtgaggcccgtcgtgctgctcgtctggagcgccgtctc
aaggtgttactaggagggtaccagtcccgtgctgtaggcctactgaagcagcatggtgaa
ctgtgggagcaggttgagcaggcagctacagagctccacaccttcactgagctgaagaaa
caagaagacacagctataccccgcagacaagaggctctacgggaggatgtggagagacag
caggagagagagaaggagctgcaacagagatatggagacctgctgctggagaaagacgct
ctgctgtctgccaaattttaa

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