Oncorhynchus tshawytscha (Chinook salmon): 112261698
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Entry
112261698 CDS
T05605
Symbol
esr2b
Name
(RefSeq) estrogen receptor beta isoform X1
KO
K08551
estrogen receptor beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
112261698 (esr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112261698 (esr2b)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112261698 (esr2b)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
112261698 (esr2b)
Nuclear receptors [BR:
otw03310
]
3. Estrogen like
3A. Estrogen receptor
112261698 (esr2b)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
112261698
NCBI-ProteinID:
XP_024293031
UniProt:
A0A8C8GTN9
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Position
LG11:29740654..29771906
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AA seq
606 aa
AA seq
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MACSPESGTDISSLLQLQDVGSSKVQERGSSPGLLPALYSPPSGMESRTFCIPSPYTDNS
HDYSLSHGPLAFYNPSMLGYSRPPISDSPSLCPPLSPSLFWPNHGHGQQNMPSLTLHCPQ
PLVYSEHNPHTPWVEPKPHGLSPSSPLLHPTKLLGKRLEDGEEVNSSSASCVVVKADMHF
CAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRK
CYEVGMMKCGVRRERCSYRGARHRRVPQGRGPSGGLVGVGTRAQMRLEGGSHPQLEVHHS
SLTPEQLISCIMEAEPPEIYLMEDLKKPFTEASMMMSLTNLADKELVLMISWAKKIPGFV
ELSLTDQVHLLECCWLEVLMLGLMWRSVDHPGKLIFSPDLKLNREEGNCVEGIMEIFDML
LAATSRFRELNLQREEYVCLKAMILLNSNICSTSPERAEDLESRGKLLRLLDSVTDALVW
AISKRGLSFQQQSSRLAHLLMLLSHIRHVSNKGMQHLSSMKKKNVVLLYDLLLEMLDANT
THSSRMSATHDPSNNDPTEPPAAPAPAVDTQLLLTFQNPEESQTLESISTSSQGAGQPRE
GRCVPQ
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcatgttctcctgaaagtgggacagacatttcttccctgctccagctccaggatgtg
ggctccagcaaggtccaagagagggggagctccccgggactcctacctgccctctacagc
cctccgagcggcatggagagccgcacattctgcatcccctctccctacacagacaacagc
catgattacagtctcagccacggacccctagccttctacaacccctctatgcttggctac
agcagaccacctatctccgacagcccttctctatgtccacccctcagtccctctctcttc
tggcccaaccatggccacggccagcaaaacatgccctcgctgaccctgcactgcccccag
cccctggtgtacagtgagcataacccccacaccccctgggtggagcctaaaccccatggc
ctcagtcccagcagccctctcctccaccctaccaagctgctggggaagagactggaggac
ggagaggaagtgaactcctcctcagccagctgtgtggtggtgaaggcagacatgcacttc
tgtgccgtgtgtcatgactacgcttcgggctaccactacggcgtgtggtcttgtgagggc
tgcaaggccttcttcaagaggagcatccaaggccacaatgattacatttgtccagcaact
aaccagtgcactatcgacaagaaccgccgtaaaagctgccaggcctgccgcctacgcaag
tgttatgaagtgggcatgatgaagtgtggtgtgaggcgagagcgctgcagttaccggggg
gcgaggcaccggcgtgtacctcaggggcgggggccgtcaggcgggctggtgggggtaggg
accagggcccagatgcgtctggaggggggctctcacccacagctggaggtgcaccactcg
tccctgaccccagaacagctgatctcctgcatcatggaagcggaaccgccagagatctac
ctgatggaggacctgaagaagcccttcactgaggccagcatgatgatgtcacttaccaac
ctggccgacaaggagttggtcctcatgatcagctgggccaagaagatccctggctttgta
gagctaagtctgacggaccaggtgcacctgttggagtgttgctggctggaggtgctgatg
ctgggtctgatgtggaggtctgtcgaccaccctgggaaactcatattctcaccagaccta
aagctcaacagggaagagggaaactgtgtggagggcattatggagatatttgacatgctg
ctggcagccacctctaggttcagggagctgaaccttcagagggaggagtacgtctgtctg
aaagccatgatcctcctcaactccaacatctgctctacctctccggagagggcagaagat
ctggagagcagggggaagctgctgcgtctgctggactcagtgacggatgccctggtgtgg
gccatctccaaacgaggcctgtcattccagcagcagtcatcccgcctggcccacctcctc
atgctactctcacacattcgccacgtcagtaacaaaggcatgcagcacctctctagcatg
aagaagaagaatgtcgtgctgctctatgacctgctcttggaaatgctggacgccaacaca
acccacagcagccgtatgtccgcaactcatgacccctctaacaatgaccccacagagccc
ccagcagcaccagctcctgctgtagacactcagctcctgctaacattccaaaacccagag
gagagccaaacactcgagagcattagtacatccagccagggtgctggccagccgagagag
gggagatgtgtacctcagtaa
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