Oncorhynchus tshawytscha (Chinook salmon): 112261710
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Entry
112261710 CDS
T05605
Symbol
tdrd9
Name
(RefSeq) ATP-dependent RNA helicase TDRD9
KO
K18408
ATP-dependent RNA helicase TDRD9 [EC:
5.6.2.5
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112261710 (tdrd9)
Enzymes [BR:
otw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
112261710 (tdrd9)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
112261710 (tdrd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Helicase_C
DEAD
HA2_C
nSTAND3
ResIII
AAA_14
AAA_19
AAA_22
NACHT
PhoH
ATPase
HA2_N
T2SSE
FtsK_SpoIIIE
Herpes_ori_bp
AAA_29
AAA_7
AAA_23
Motif
Other DBs
NCBI-GeneID:
112261710
NCBI-ProteinID:
XP_024293051
LinkDB
All DBs
Position
LG11:complement(30645698..30674320)
Genome browser
AA seq
1342 aa
AA seq
DB search
MKKAITAEQITEWFTLGTHFANILITDEVPKEVKLEESSIQSPAKASQQQGSPKRDDSDG
GLRNKTGKPDFLASSPPPPLTTYEYPSLPITKNRQEIISLIENNSVVIIRGATGSGKTTL
LPQFILDYYSEKNAPCNLVVTQPRKIGASSIARWVARERKCTLGSLVGYQVGLEKMVTEH
TRLIYMTTGVLLQKLVGAKSLTEYSHIFIDEVHERTEELDFLLLVVRKLLHSNSRYIKVI
LMSATINCREFAEYFGTPIRSQMNPAYVFEVEGAPYAIKEFYLEDLCSLIPYRVDTRRPD
DPYITVEMYNVAVSLIQSFDELEAKDQSSRTAREGGLSLPDRGSVLVFLPGLGEIHYMQE
ALSKLVRKRLQVYPLHSSVTLEEQNGVFLVPVPGYRKIILSTNIAESSVTVPDVKYVIDF
CLARHMVCDKETHYQSLRLTWASKTNCNQRRGRAGRVSMGYCYRLVTKEFWRNEIPDYVV
PEMVRAPLANIMLKVKLLDMGDPRSLLSTALSPPQLNDIERTILQLKEMGALSVGNDGQG
QKRFDGELTFLGRILAHLPVDLHLGKMIVLGHVFGCLEECLIIAASLSLKSFFAMPSLQQ
LAGYRSKLSFAHGVQSDSIAFVNAFKAWHTSRSKGELRHPKSELEWGKENCIQIKRIREV
AELYEDLKERTSQFNMHVIENPVPMDYASLHKQRFILQVVIAGAYYPNYFSQGEMDEELA
SKDLSGHDPKTTVLVRNLPPYSFLYYKQLQSLFRQCGQVKSIAFDGARGHVEFYRTTARG
SGVLPEVSLALLLAHQRHPLDIFVHPSDEVETFAGSRTICHMRYARVNVDFQNNSVYPVG
LLSSTIDPDKLPSNPIFVVNITDVVEVGHFWGFQADDASMEKQRHLTAEINSHELCPVPV
SLYPNLLCLAPFSEGDEQGLYYRAKILHVCGSSVEVFFLDFGNTSLVSCSCLRKLPADIM
AYPFQAQEFQISGMRPSAQSMILGDQWSSRARNRFITLVNGHPLIVSLFSILHGIMRVEL
LINTDTVTSSVADIMMQEGHAIKAEESFESKQIHDVLVSLYKDLQDGTFTPNATSSSWKT
SKEEEKQLIDSLLQSFAKTSQSSLKSKVRVHGPSSPHKVNFHSFSNVTNYRSVLIEKDSI
NSVALNDSPQDSHQRMLVAGSVSVSATGAQILLKETTLMPHIHGLPALITMLFTPATELR
TNEERTSYTGALCGLGWNVQSQAAALPEHDMELAFDVKFDVEDITEINALRGAINRLVCE
GPNGPLHLGPDRINTLQEDCRERLVSLFTKSPPREDLAPVYHEEPKQWNQVDPSQKMEIV
QKEDGKSKGVLFQLHPVTLLNI
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcaataactgcagaacagataacagaatggtttacattagggacccatttt
gctaacattctaatcacggatgaagttccaaaagaagtaaagttagaggagtcatcaata
cagagccctgcaaaagcttcccaacagcagggcagtccaaagagggatgactcagatgga
ggactgaggaacaagacaggaaagcctgactttttggcgagttcacctccacctccattg
accacttatgagtaccccagcttgcccatcacaaagaatagacaggagatcatctctctg
attgaaaacaactcagtggtgatcatccgtggagccacaggcagtgggaagactaccctg
ctgccccagttcatcctggactactacagcgagaagaatgccccttgtaacctcgtggtc
acccagcctcgcaaaataggcgccagcagcatcgcccgatgggttgccagagagcgcaag
tgcaccctgggtagtctggtgggataccaggtgggcctggagaagatggtcactgaacac
acaagactcatctacatgaccactggggtgctgctgcagaaactggtcggagcaaagagc
ctgactgagtactcccacatcttcatagatgaggtccatgagcggacagaggagctggac
ttccttttattggttgtgaggaagctcctccattccaactctcgttacatcaaggtcatc
ctcatgtcagccaccatcaactgcagggagtttgcggagtactttggcacccccatccgc
agccagatgaacccagcctatgtgtttgaggtggagggggctccctacgccatcaaggag
ttctacctggaggacctctgcagcctgatcccctacagggtggatacccgccgtccagat
gacccttacatcactgtggagatgtacaacgtggctgtcagccttatccagagctttgac
gagctagaggccaaagatcagagcagtaggactgcgagggagggaggcctgtctctgcca
gaccggggcagtgtgctggtgttcctccctggtctgggtgagatccactacatgcaggag
gctttgtccaagctggtgcgcaagagactgcaggtgtacccactccactcctctgtcact
ctggaggagcagaatggggtgtttctggtgcctgtcccaggatacaggaagatcatcctc
tccaccaacattgcagagagctctgttacggtcccagatgtcaaatatgtgattgatttc
tgtctggcacgacacatggtctgtgacaaagagacccattaccagtccctccgcctcacc
tgggcctccaagaccaattgcaaccagcgtagaggcagggctgggcgagtgtctatgggc
tactgttaccggctggtgaccaaggagttctggaggaatgagatcccagactatgtggtt
cctgagatggtgcgtgcccccctggctaacatcatgctgaaggtgaagcttctggacatg
ggggacccccgctccctcctctccactgctctctcacccccccaactcaatgacattgag
aggaccatactccagctcaaagagatgggtgcactgtctgtggggaacgatggtcaaggc
cagaagcgttttgatggagagctgacgtttctgggtcggatcctggctcacctgcctgtg
gacttgcaccttgggaagatgatcgtgctcggccacgtctttggctgtctggaggagtgc
ctcatcatagccgcctctctgtctctgaagagcttctttgccatgccctccctgcagcag
ctggcagggtacaggagcaagctgtcgttcgcacacggtgtgcagagtgattcgattgct
tttgtcaacgcattcaaggcttggcacacgtccagaagcaaaggagagttgaggcatcca
aagtccgagctggagtggggcaaggagaactgcatccagatcaagaggatcagagaggtg
gccgagctctatgaggacctgaaggagagaacatctcagttcaacatgcacgtgattgag
aacccagtgccaatggactacgccagccttcacaagcagaggttcatcctgcaggtggtt
atcgctggtgcctactaccctaactacttctctcaaggggaaatggatgaagagctggcc
tccaaagacctgtcaggccatgatcccaaaacaacagtgctggtgaggaacctgccccca
tacagttttctgtactacaagcaactgcagtccctgttccgccagtgtggccaggtcaag
tccatagccttcgacggagccagagggcatgtagagttctaccggacgactgctcgaggg
tcgggggtgctccctgaggtgtcactggccctcctcttggcccaccagaggcatcctctg
gacatttttgtgcatcccagtgacgaggtggagacttttgcggggagcaggaccatctgc
cacatgagatacgctcgtgtgaatgtggacttccagaacaactcggtctacccagtgggg
ttgctgagcagcaccatcgacccagacaagctgccctctaaccccatcttcgtggtcaac
atcacagacgtggtggaggtgggccacttctggggcttccaggcggatgatgccagcatg
gagaagcagcgccatctgacagcggagattaattctcatgagctgtgtccagttcctgtc
tccctctacccaaacctgctgtgcctggcacctttctctgagggcgacgagcagggcctc
tactaccgtgccaagatcctacatgtctgcggcagctctgtggaggttttctttctggac
tttggaaacaccagtctggtgtcgtgtagctgcctgaggaagctacctgctgatatcatg
gcctacccattccaggcccaggagttccagatctctgggatgcgtccatcggcccagtcc
atgatcctgggggaccagtggagcagccgtgcccgcaaccgctttatcacgttggtgaat
ggccacccactcatagtctccctgttctccatcctgcacggcatcatgcgtgtggagctg
ctcatcaacactgacacggtcacctccagcgtggctgacatcatgatgcaggagggacac
gccatcaaggccgaggagagctttgagtcaaagcagatccacgacgtgctggtgtctctg
tacaaagacctgcaggacggcaccttcactcccaacgctaccagcagctcctggaagact
agcaaggaggaagagaagcagctaattgacagcctgctccagtcctttgccaagaccagc
cagtcctctctgaagagcaaggttcgtgtgcatggcccatccagtcctcataaagtcaac
ttccacagctttagcaacgtcaccaactacaggtcggtgctcatagagaaggacagcatc
aactccgttgcgttgaatgacagtcctcaggacagccatcagcggatgctggtggctggc
tccgtgtctgtcagtgcgacaggcgcacagattctactgaaggagaccacactgatgcct
cacatccacggcctgcctgcactcatcaccatgctcttcacccctgccacagagctacgc
accaacgaggagaggaccagctacactggtgccctctgtggtctggggtggaacgtccag
tctcaggcagctgccctgcctgaacatgacatggagctcgcctttgatgtcaaattcgat
gtagaggacatcactgagatcaatgcgttgcgtggtgccattaaccgtctggtgtgtgag
gggcccaatggtcctctgcacctggggcctgacaggatcaacaccctgcaggaggactgc
cgcgaacgactcgtcagtctgtttacaaagtcaccccctcgagaagaccttgctcctgtg
taccatgaggaaccaaagcaatggaaccaggtggatcccagtcagaagatggagattgtc
caaaaggaagatggaaagagcaaaggggtcctgttccagctacaccctgtcacactgctc
aacatatga
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integrated database retrieval system
