Oncorhynchus tshawytscha (Chinook salmon): 112261715
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Entry
112261715 CDS
T05605
Name
(RefSeq) reticulon-1 isoform X1
KO
K20721
reticulon-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112261715
03036 Chromosome and associated proteins [BR:
otw03036
]
112261715
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112261715
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112261715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
DUF4736
Motif
Other DBs
NCBI-GeneID:
112261715
NCBI-ProteinID:
XP_024293060
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All DBs
Position
LG11:30590614..30645361
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AA seq
726 aa
AA seq
DB search
MSSKPGDELGSEGKWFGDDCERNGIFGSTPPLFDELREDLKSKSREETSDLDEKFHKFED
DAKRPPVAMETASTGDAMSDLFRNPMSDDGELYTSLLSNQSYPSGQDGSYLSDDLKRSSD
HSSQDTFDSYGIFDSPHTKMTTDLVDVMPKSLLGSSELKTEAYNYMDISHGDDVHNLSCP
QPAPLHSLVDTGLSGLDSLGDYMDKSPAGHEEEEEENLGPALDSHSFPYVEEPSEDEELS
DYRSYRNLGTPQTASPVKIILTESHPPAAPKPILPQANVSDNILSLGLQGVPTVTLSEPE
DDSPDSSPNASPTEKESPSQDLFTSVPSSKPTPGSTKASEQDVSSAESGDSEIELVSEEP
PLRSPPSTKSSNNPFEQSPSSKGGFSQAGNPFDNPPSAKGPTSYSILREEREAELDSELF
IESANEESPKREGSGPKQGVNTPSPLILTAASPARSAPELVPAEPVTSSTIKSSNEKSKS
PMKMEEDRPTKPKPPMATVPPEVRSEKPLLDDKHVTEGKGDLATPAAPVFMEGFDKQKTI
DLLYWRNVKQSGAVFGSVLLLLFSLTQFSVVSVGAYLTLAALSASISFRIYKSVLQAVQK
TDEGHPFKSYLEVEISLSQDQIGNYADKALLYANTCMKELRRLFLVQDLIDSLKFAVLMW
LLTYVGALFNGLTLLILAVVSMFSMPIVYEKHQAQIDQYVGLIRTQVNSVVGKIQAKIPG
AKRKEE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgaagcccggtgacgaactaggttcggaagggaaatggtttggggacgattgt
gaaagaaatggcatattcggaagtacacctcctctgtttgatgagctacgtgaagattta
aaatcgaaaagcagggaagagacgagcgacctggatgaaaaattccacaaatttgaggac
gatgcgaaaaggcctcccgttgctatggaaactgcatctacaggtgatgccatgtctgac
cttttcaggaatcccatgagtgatgatggtgaactgtacacctcactcctgtccaatcag
agctacccctcaggccaggatggctcttacctgtctgatgacctgaagcgttcctctgac
cactcctcccaggacaccttcgactcctacggtatctttgattccccccacaccaagatg
accactgacctggttgatgtgatgcccaagtccctgctgggtagctctgagttgaagacg
gaggcctacaactacatggatatcagccatggtgatgacgtccacaacctgagctgtcca
caaccagcacccctgcatagtctggtggacaccgggctgtctggcctggactccctggga
gactacatggataagagccctgcaggacacgaggaggaagaggaggagaacctgggaccg
gcgctggactcccactccttcccttacgttgaggagccttctgaggatgaggagctgtct
gactaccgctcctaccgcaacctgggcacccctcagaccgctagccctgtgaagatcatc
ctgaccgagtcccatccacccgctgcccccaaacccatcctcccacaggcaaacgtgtct
gacaacatccttagcctgggcttgcagggcgtccccacggttacgctctctgagccagag
gacgacagccctgactcatcccccaatgcatccccaacagaaaaagaatccccttcccaa
gacctgttcacgtctgtccccagcagcaagccgaccccgggatccaccaaggccagtgag
caggacgtcagcagtgcagagtctggggactctgagatagagctggtctctgaggagccc
cccctgcggagcccccccagcaccaagtccagtaacaacccttttgagcagtctcccagc
agcaagggaggtttcagccaggctggcaaccccttcgacaacccccccagtgccaaggga
cccacatcctacagcatcctgagggaggagagggaggctgagctggacagtgagctcttc
attgagtctgccaatgaggagagccccaagagagaggggtccggccccaaacagggggtc
aacaccccttcacctctgatcctcaccgccgcgtcccccgcccgctctgccccagaactg
gtcccagcagagcctgtgacgagctccaccattaaatcatccaatgaaaagagcaagagc
cccatgaagatggaggaggatcgcccaactaagcccaagccccccatggccaccgtgccc
ccggaggtgaggtccgaaaagcccctcctggacgacaagcacgtcactgaggggaaagga
gaccttgctacacctgctgcgcctgtctttatggagggctttgacaaacagaaaaccatt
gacctgctctactggaggaacgtgaagcagtctggagctgtgtttggcagcgtgctcctg
ctgctcttctctctgacccagttcagtgtggtcagtgtgggagcctacttaaccctggcc
gccctctctgccagcatcagcttcaggatctacaagtctgtgcttcaggctgtgcagaag
acggatgaaggacacccattcaaatcctatctggaagtggagatctccctgtcccaggat
cagattggtaattatgctgacaaggcgttgctctacgccaacacctgtatgaaggagctc
cgtaggcttttcctggtccaggacctcatcgactcactgaagtttgctgtgctgatgtgg
ctgctgacctatgtgggcgctctcttcaatggcctgactctgcttattctagccgtggtg
tccatgtttagcatgcccattgtctatgagaaacaccaggcacagattgaccaatatgtt
ggactaatacggacccaagtgaactccgtagtggggaagatccaggcgaagatccccggg
gccaagcgaaaggaagagtag
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