Oncorhynchus tshawytscha (Chinook salmon): 112261798
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Entry
112261798 CDS
T05605
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112261798
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
112261798
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
FXa_inhibition
EGF
hEGF
EGF_2
EGF_PEAR1L
EGF_DL_JAG
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
112261798
NCBI-ProteinID:
XP_024293178
LinkDB
All DBs
Position
LG11:33260997..33409838
Genome browser
AA seq
2112 aa
AA seq
DB search
MNRLWIAVLVVLTIAVVRMCDCRKDSTGGGQEMWDQLRARARGQGHSAGGANDADPARPS
RESSHRSSHNVSHSGRGAPVSSLYQRDNRHATVIKPVPAPITEASHPADDSTVAQDAARR
AARQLGTHHSSQYRPRIIYRQSNKPSSTHTRRLAGPNVCGGHQCCSGWAVASGTNRCIKP
DCQPPCQNRGSCSRPHTCVCRSGFQGARCEEAAPEQVYIHTGGSLRRIQPGTNPFQREQP
RRKPTERQAVDIPSPETTRQSLQPVTQVRRGPADSSSPQQTGTSRTVKRYPSSTGPITSN
ALPNGNGHGKGNGRNGHRPTTNVHTDRQVNDAVAPAGANLTSNLDRIKIVFTPMVCRRVC
SGGRCYNNCEKGDTTTVYSENQHQSPKTQGFRLFFCQIPCLSGGRCIGRDQCWCPSNSTG
KFCHLPAPPSARPTLSRKDGSLAGLNSSSHSMYTLPLSNQQVSLHPSLVNVHIQHPHEAE
VQIHQVARVKLGQRPPAAEGGHSIQQRSQPGLGNGNGHEHGHSNGNGHGNGHGNGHTLAN
GNGNSNSRPHTRQNGYVGRCFQETVDGQCGKPLPGLTKQDDCCGSVGASWGLNKCTECPT
KPAYAVIANGQVECPKGYKRVNLTHCQDINECLMNGICKNAECLNTRGSYRCTCKPGYML
DPARSHCVSDKAVSDQRGMCYRSASAGTCSLPLTQHITKQICCCSRVGKAWGTAWGTVWG
TACERCPLPDSDHFKEICPAGHGYTYSRSDVQISLRQLEEEELSRTGVSWEAQNPSHPQL
PQQPAQPPQQLPHIQQTPQIPQYPHHPQHPQELPQHSHHPEHPQTPQNPQYPHTVQQPQY
PLHPDPDTQHPAEETHSQPQDVEILNPSPVATDSPLKYSDVVEKVTPGSPVNLGPESEGQ
RTASIIVATQVTDIDKCAITPTICGHGRCVPVQTGYTCYCDPGYKLSALQTNCIDVNECE
EDPCGGKGRCVNTFGSYTCHCYSGYSFGYKVITQNRKFCHDINECDMANKCQDGDCFNTE
GSYSCECKSGYAKSWRGQCEDVDECRDPHSCPSGRCVNAPGSFQCQACGPGFKAARGRCL
DVNECLDQSVCFHGRCVNSEGSYSCNCYQGYQASLDNNSCQDVDECLLPGACLHGRCVNL
DGSHRCSCNPGYQTTPDSRACEDVDECATPNVCPGGICTNTEGSYSCKNCSPGFQRSADG
QRCEDVDECSQADMCLGGVCANTEGSFTCTSCKDGYRVSQDRQRCEDIDECQSGSVCANG
ICLNSEGSYSCITCPSGYSVSLDGEVCEDIDECALPTTCPKGTCTNTEGSFICTTCRPGY
RVTEDGLECEDVDECLVANVCPGQLCRNSPGSFSCRSCGTGFTLSEDGSHCMDINECLSM
GVCPMGVCNNTEGSYSCMTCDLGYTLAPNKLSCEDINECEDSGLCLGGQCTNSPGSYSCS
CPPGLELVDGTSCRGGQWRETDVQREVRVERFQVEWRVGDVNECSKDGVCSHGQCLNTDG
SYLCLCEAGFKYSADTADCEDQNECKEYGSSVCGIWLCENTIGSYRCFMGCQPGLYGQDN
PDCDIDECVNENICGDHGFCENTDGSYRCQCDRGYTNPPGDAGAHGCVDVNECEMSTALC
GEALCENVDGSFLCICPSDNEEFDPITSQCRPQAATDEDAPPHPPKPASPTEEQRKECYY
NLNDANFCDNVLSRNTTKQECCCTVGSGWGDDCEIHPCPVPGREEYNQLCPHGSGLLPQA
VSSHSLEQQSFKDVDECKMFGPDICKNGRCSNIFSSYSCFCRTGFYYDNIRLECLDYDEC
LTEKACVCGVCVNTPGSFNCFCSPSLVLDTTCRHCISVNTTEEIDEPDEDIHLDICWRDM
IELYVCIQPLIGWRTTYTECCCLYGVAWSEQCAFCPSRDSDDYALLCNLPRRRGSDSLRE
RPGNEYGPGVEGPEGPYVPPYWDNYEGVPISGPGGTYYNPEDTQGNTNDYGSRVRDREPS
LRVPIHRPREFQPHPVDSNNDHYDGFEGLRAEECGILNGCENGRCVRVREGYTCDCFDGY
ELDLTKMACIDINECEDISDKVALCKNGACTNTEGSYKCTCLPGFQASAKPHECIPEVPL
SGLRESGWKLRV
NT seq
6339 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggttgtggattgcagttttagtggttttaaccattgcagttgtacgaatgtgt
gactgtcggaaggactcaacaggtggtggacaggagatgtgggatcagctccgggcgcga
gctagggggcaaggtcactccgcagggggagcgaacgacgctgaccccgccagaccatcc
agagaaagctcgcacaggtcctctcacaatgtatcgcactccggtcgcggggctcctgtg
agctcattatatcaacgagataacaggcacgcgacggtaattaaaccagttccagctccc
attacagaagcttcccacccggcggacgattccaccgttgcacaagatgctgcgcgtaga
gccgcaagacagctcggcacccaccactcatcacagtacagaccccgaataatttacaga
cagagcaacaaacccagctccacgcacaccagacgccttgcaggacctaatgtatgtgga
ggtcaccagtgctgctctggatgggctgtggcttctgggaccaaccgctgtataaagccc
gactgccagcccccctgccaaaaccgtggctcctgcagcaggccccacacctgtgtgtgc
cgctctgggttccagggggcccgctgcgaggaggctgccccagagcaggtgtacatccac
accggagggtccctgaggcgcatccagccaggcaccaaccccttccagagggagcagccc
aggaggaaacccacggagaggcaggccgtagacatccccagccctgagaccaccagacag
tctctccagcctgtgacccaggtgaggcgaggaccagccgactcttcgtctccccagcag
actgggacgtctcgcacagtcaaacgatacccatcatccactggccccatcacctccaac
gccctgcccaatggcaacggacatgggaaggggaatggtcgtaacggccacagacccacc
accaatgtccacaccgacagacaagtcaacgatgcagtggcgccagcaggggccaacctt
acctccaacctggaccgcatcaaaatcgtcttcacccccatggtgtgtcggagggtgtgc
agtggcggccgctgctacaacaactgtgagaagggtgacaccaccaccgtctacagtgag
aaccagcaccagtcacccaagacccagggcttcagactcttcttctgtcagatcccctgt
ctgagtggtgggcgctgcattggcagggaccagtgctggtgcccatcaaactcgacaggg
aagttctgccacctcccggcccccccttctgccagaccaaccctcagccggaaggacggc
agcctggccggacttaactcctcatcccactccatgtacaccctgccgctgtccaatcaa
caagtctctctacatccatccctggtgaatgtccacatccagcacccccatgaggctgag
gtccagatccaccaggtagcccgggtcaagcttggccagagaccccccgcagccgagggg
ggtcactctatacagcagcgctcccaacctggccttggcaacggcaatgggcatgagcat
gggcactccaatggaaacggacatgggaatggccacggaaacggacacaccttagccaac
gggaacggcaacagcaactccagaccccacactcggcagaacggatatgtgggaaggtgc
ttccaagagaccgttgatggacagtgtgggaagcctcttcctggcctgaccaaacaggat
gactgctgtggaagtgtgggagcctcatggggcctgaacaagtgcacagagtgtccaacc
aaaccagcgtatgcagtgattgcgaacggccaagtggaatgccccaagggttacaagagg
gtgaacctgactcattgtcaagacatcaacgagtgtctgatgaacgggatctgtaagaac
gctgagtgtctgaataccagaggaagctacagatgcacctgtaaaccaggctacatgctg
gaccctgccaggagccactgtgtctcggacaaggctgtgtcggaccagagggggatgtgt
taccgctcagcatcagcagggacctgctctctgcctctcacccagcacatcaccaaacag
atctgctgctgcagccgtgtgggcaaggcctggggcacggcctggggcacggtctggggc
acggcctgcgagaggtgccctctgccagactcagaccatttcaaggagatctgtcccgct
ggccacggctacacatactcgcgctccgatgtgcagatctccctgagacagctggaggaa
gaggagctgagtaggacaggtgtttcctgggaggcccagaaccctagccacccccaactg
ccccagcagccagctcagcccccgcagcagctgccccacatccaacagaccccacagatc
ccacaatacccccaccatccacagcacccccaagagctcccacagcactcccaccatcca
gagcacccccagacacctcagaaccctcagtaccctcacactgtacaacaaccccagtac
cctctccatccagacccagacacacagcatcctgctgaggagacccacagccagccacaa
gatgtggaaatattgaacccgtctcctgttgcaacagactcaccattgaagtactcagat
gtggtagagaaagtcactcctggctctcccgtcaacctggggcctgagtctgagggccag
cgtacagcctccatcatcgtggccactcaggtcacagatattgacaagtgcgccatcact
ccaaccatatgtggccatgggcggtgcgtgccagtgcagacaggctacacctgctactgt
gaccccggctacaagctgagcgcgctccagaccaactgcatcgatgtgaatgagtgtgag
gaagacccttgtggagggaagggccgttgtgtgaacacctttggctcctacacttgccac
tgctacagcggctacagctttggctacaaggtcatcacccagaacaggaagttctgccat
gatataaatgagtgtgacatggccaacaagtgccaggatggggactgtttcaacacagag
ggatcttactcctgtgaatgcaagagtggctacgccaagtcctggaggggacagtgtgaa
gatgtggatgagtgccgggacccccactcatgccccagtggaaggtgtgtcaatgcccca
ggctccttccagtgccaggcttgtggccccgggttcaaggctgccagagggagatgtctg
gacgtaaacgagtgtttggaccaatcggtgtgcttccatggtaggtgtgtcaactccgag
ggctcttacagctgtaactgttaccaaggataccaggcctctttggacaacaacagttgt
caagatgtggatgagtgtctgctccctggtgcctgcctccatggcaggtgtgtcaatctg
gatggctcccacaggtgcagctgtaaccctggttaccaaaccactcctgacagcagggcc
tgtgaagatgtcgatgagtgtgctactcctaatgtgtgccccgggggaatttgcactaat
accgaaggttcctactcatgcaagaactgcagcccgggattccagcgatcagctgatgga
cagagatgtgaagatgtggatgagtgctcccaagcagacatgtgtctaggaggggtatgt
gccaacacagagggctccttcacctgcaccagctgtaaggacggataccgggtttcccag
gacaggcagaggtgtgaggatattgatgagtgccagtctgggtctgtgtgtgctaacgga
atctgtctgaactctgagggctcctactcctgcatcacctgtccctcaggctacagcgtc
tcccttgatggagaggtttgtgaagatattgatgagtgtgcgctgcccactacgtgcccc
aagggaacatgcaccaacacagagggttctttcatctgcaccacctgcaggccaggctac
agagtgactgaggatgggctggagtgtgaagatgtggatgagtgcttggtggctaacgtg
tgcccaggccagctgtgtaggaatagtcccggatccttctcctgcaggagctgtgggact
ggctttaccctgtctgaggacggctcccactgcatggacataaatgagtgcctgtccatg
ggggtctgtcccatgggcgtttgcaacaacacagagggctcttactcctgtatgacctgt
gaccttggctacacgctggcgcccaataagctctcctgtgaagacatcaatgagtgtgag
gacagcggtctgtgtctgggaggacagtgcaccaacagccccggctcctacagctgctcc
tgtcccccgggtctggagctggtggatgggacgtcctgtagaggcggtcagtggagagag
acagatgtgcagcgagaagtcagagtggagaggttccaagttgaatggcgcgttggagat
gttaatgagtgcagtaaggacggcgtgtgctcccatggccagtgtctcaacacagatggc
tcctacctctgcctgtgtgaggctggcttcaagtactctgcagacacagctgactgtgag
gatcagaacgagtgtaaggagtatggtagctcggtgtgtggcatctggctctgtgagaac
accattggctcgtatcgctgcttcatgggctgccagcctggcctgtatggacaggacaac
ccagactgtgatatcgatgagtgtgtgaatgagaacatctgtggggaccatggcttctgt
gagaacacagacggctcctaccgttgtcagtgtgaccggggttacaccaacccccctggt
gatgccggggcccatggctgtgtagacgtgaacgagtgtgagatgagcacagcgctgtgt
ggagaggccctgtgtgagaacgtggacggcagcttcctgtgcatctgccccagcgacaat
gaggaatttgatcccatcaccagccagtgccgcccgcaggcagctacagatgaagatgct
cctcctcatcctcctaagccagcctcacccacggaggagcagaggaaggagtgttactac
aacctgaacgatgctaacttctgtgacaacgtgctgtctcgcaacaccaccaagcaggag
tgctgctgcacggtggggtccggttggggggacgactgtgagatccacccctgccctgtc
ccagggagagaggagtataaccagttgtgtccacatggtagtggtcttctgccccaagct
gtttcctcccacagcctggaacagcagagtttcaaagatgtggatgagtgtaagatgttt
gggccagatatctgtaagaatggccgttgttctaacatcttctcctcgtactcctgcttc
tgccgtacaggcttctactacgacaacatccggctggagtgtttggattatgacgagtgc
ctgacagagaaggcgtgtgtctgtggggtgtgtgtgaatacccctggctctttcaactgc
ttctgcagtccttctctggtcctggacaccacctgccgccactgcatcagcgtcaacacc
accgaggagattgatgagcctgatgaggacatccatctggacatctgctggcgggacatg
atagaattgtatgtgtgtatccagcctctcatcggatggaggaccacctacacagagtgc
tgctgtctctatggagtggcctggagtgaacaatgtgccttctgccccagtagggactct
gatgactacgcattactttgtaacctgcctaggagaaggggctctgacagtctgcgagag
cggccaggcaatgagtacggccctggtgtcgagggtcctgaagggccctatgtccccccc
tactgggacaactatgaaggagtgcccatctctgggcctgggggtacctactacaaccca
gaggacacccaggggaataccaacgactatggctcacgagtgagagacagagaaccgtca
ctacgcgtccccatccaccggccaagagagttccagcctcaccctgtagactctaacaat
gaccactatgatggctttgaaggcctgcgagcagaagagtgtggtatcctgaacggctgt
gagaatggccggtgtgtgcgcgtgagggaaggttacacctgtgactgctttgatggatac
gagcttgacctcaccaaaatggcctgcatcgacataaacgagtgtgaggacatcagtgat
aaagtggcgctgtgtaagaacggggcctgtaccaacactgaggggtcgtacaagtgcacc
tgcctgcccggcttccaggcctccgccaagccccatgaatgtatcccagaggtcccattg
tctggcctcagagagagtggctggaaactgagagtgtag
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