Oncorhynchus tshawytscha (Chinook salmon): 112261863
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Entry
112261863 CDS
T05605
Name
(RefSeq) syncoilin isoform X1
KO
K10377
syncoilin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112261863
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
112261863
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GFIT
Motif
Pfam:
Filament
Snapin_Pallidin
DUF5713
Motif
Other DBs
NCBI-GeneID:
112261863
NCBI-ProteinID:
XP_024293260
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Position
LG11:complement(35680066..35689229)
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AA seq
414 aa
AA seq
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MFMFRQAAPQKRWSKEETVCLCCYLHFSASLSRIQVMETPMAVEDLQRRREVESRENLHS
GEDSMEEAHSVESSLMAALTHHERSMYGAGFAAQAHITEVVSPMERCVEYTFVQMQGTMD
SVGLLFEECIKKVGHLESQRDELILELLQLEQPMLQATVALRGQLLEARRVLTSVQLEFI
HLQIEVGQVKSKLFVTARDCIQSQLALAARQYEVAQAAITQEELRAHVQNLTEEVAQLQE
AQHNQLNTLKDRARQPSRPRAMSDVTHCRRASLDLQKRLSGSMRNLEGWYEPRLLALLRR
RQAGKETLRRSRDVGRDLKARLGPLKEQTQRLELQRACLEERIALMERERVERVAQYKET
VDSLEETMRKLKLELCIQKKANRQLEELKKGLLSELNYDRGCIEVSETTAERES
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgtttagacaagcagctccacagaaaaggtggtctaaagaggaaactgtttgt
ctgtgttgctatctacacttctctgcatcgttgtctagaatacaggtgatggagacacca
atggctgttgaggatctacagagaaggagggaagttgagtctagagagaacttgcactct
ggagaggactccatggaggaggcacattctgtggagagcagcctaatggcagcactaacc
caccatgagagaagcatgtacggtgccggatttgcggctcaagcacacatcactgaggta
gtaagccccatggagaggtgtgtggaatatacctttgtccagatgcaggggaccatggac
agtgtggggctgctctttgaggagtgcatcaagaaggtgggccatctagaaagtcaaagg
gatgaattgatactggagctgttgcagctagagcagcccatgctgcaagctactgtggcc
ttgaggggacagttgttagaggcacgtagagttctcaccagtgtccaattggagtttatt
catctgcaaatagaggtgggacaagtaaagagtaagctgtttgtcacagccagggactgt
atccagagccagctagcgctggctgcacggcagtatgaggtggcccaggctgcaatcacg
caggaggagctccgggcccacgtccagaatcttacagaggaggtagcccagcttcaggaa
gcccagcacaaccagctgaacaccctaaaggaccgggccagacaaccatcccgtccccgg
gctatgagcgatgtcactcactgccgacgagcatccctggacctgcagaagcgcctcagt
ggcagcatgaggaatctagaaggctggtatgagccacgcctgctagccctcctccggagg
aggcaggctgggaaagagaccctgagaaggagcagggatgtgggccgagaccttaaggcc
agactggggcccctgaaggagcagacccagaggctggagctgcagagagcttgtctagag
gagaggattgctctgatggagagggagagggtggagagagtggcacagtataaggagact
gtggactcgcttgaggagaccatgaggaagctgaagttggagctttgcattcagaaaaag
gcaaacagacaattggaagaattgaagaagggacttttgagtgagctgaactatgacagg
ggctgtattgaagtgagcgaaacaactgctgaaagggagtcctaa
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