Oncorhynchus tshawytscha (Chinook salmon): 112261972
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Entry
112261972 CDS
T05605
Name
(RefSeq) beta/gamma crystallin domain-containing protein 1 isoform X1
KO
K25509
beta/gamma crystallin domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112261972
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112261972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crystall
Ricin_B_lectin
RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID:
112261972
NCBI-ProteinID:
XP_024293399
LinkDB
All DBs
Position
LG11:39995703..40030716
Genome browser
AA seq
2509 aa
AA seq
DB search
MISYDMSAFNSLSQNKSRNKSSDRVLNRIGSFFSIKKKKSRSGSLSADSEDGSWLGPGSP
VSPQSPGSPVSPQSPGSPLSPHQPPQEDWQRTPTTTRREGEVVEAGARPVQGNLSELQEE
GSVFSTSSSPGTSSLASLVVVDRGYLLFAGSDSSDRGSVREVQVCRASRAEPEADGEADR
NSWNLTPTNSSSSGADQVPGLSPTEDVVGEASRRLQVHLEQTTVKDREGSGGGSPVVQNT
LRSFELSQSHLKADFTSLVTESKKTSLKTSVGGKGTYLMGVTVGSQSHTPSSSDPQPEGE
EGEDSPAMGKKNRRRALKSTSSSSPETAPPTQTMLHGGEEGTTQDSPVKLHKALWVETHL
GEEEGERKGKRKIVNSHSVLAIPMTVAPVEYPDTAGVLATLTPSAVSAAEASGRKPKPKL
AVSTAPASKESKTTNKAQPEANSPGTDSESSTPLEYQMALSKEEKRRSVKLSRSEKIFPK
KVYVSPEPSFDGDEQTKTELENNDIADLASKIPQKSEVKLSPSPQKVYVDLKEPNNDCII
TAGEITMGTDSDQRHHDPMAVDSSSTSPTPELDEASPTTTMPGRKTQPNTGGSRVRCQGM
TQVTPSKPGDKVGNVASRSKCPPPPVGPKSKAVLGMAKGKGLKDGGKAGISSGAPSQRTP
KDGSEKTKVMSPTLKDQPTAGKTEVTDSPKSKIPKKSQTEAVSKPPLSPGTTSVVDVSVA
VSLPVLGSKPQKTPKPKHLMIKTDKKPITEEVNEVGSGGKPIPGPVTSEEESPTKVPVMS
PVNSDKVNLSNGMEKDPEDNNTDIAKTSEPKDVKKQAPTCPDSTSSSMIPKSRLPKAPDN
SLSLVRKMKDGKLQTIDTGSKTTKTTERASVVNSRPSTPTSPKQQELPSSEEMPPDETMT
TEPEKGSKLPCPLQTNLPQQASNKSTPRDDGDTPTPPSLLPTKPEKPASLGLKKKSNITS
PTMDMTADDSGKASPLSLKSPVKDPSDSVTVASKRAMFRQVTPPKGKPSKPLKKYEQTMN
SETQSKSIHDHVSLVTDNSQIDDQQTTPATHQQLFVNDQTDEPAVTGTKKSLEDRSSSST
PEKKMYKISENGQKKSTSVKTTCITKEQQTKPYPDLSSETESDRNYVEALTSTPLQQMGP
VSPGVVLEKHPTEPSLIVSASSTPTHEEVIYTSTKPELTDHIHTDSENQANQKSDEYNEN
TSPASEKLILSAGEGISNTNQPVEHGLDVAKDSSPKNASTVVERRESQDTATQSPIFGSE
EKSKKLANAQTPDIVPIRNGIVSDISIVSGKETEVQKGGEPLKVSDIITEPAIVLKPIKN
GEVQLNKELPSLTQNLADAHSGPHKENKEDKLGEAATKSTVTKMDAKQESKTITTKDQKE
KVTKQERPSEGATKILDTKQDSKSIRTKAQEKKVLLLKEPPKMTKANPKAELPLQLPTSL
KLPSPPKPLPLKQESPSSWLNVERGSKQEQKRETKRRLDCSTSEDESLAEIDNVDDFIRS
IKELGTPFPLPPKRHHDHAKTSSPPFALPAIKEDRFENPFDADGFQFGLKKRTKDEETPA
MLIKKQAREEKTQPRRANAEDSLLFKALQSPSRARRKPGCQTDGKDGEVNIKVEGKREVE
KKEEQGEETGQLTSRLGRMSLLSNLLSSPRTSRRNKGDPSSSVSNGAPPSPTTQGTVPER
AGWRSMNPGLSMGVVATGESIISPSSPPPLPLFTELKLPDPLEQYLRTDKGSSQSSATQS
TMASPVMGLGHGTGLKGLTLGLHPATNHIPQAPLNCLPAANPKIPEVRGFHKRPGKIVLH
ERAQFEGEAYEVFGDVEDASMMKLSPVISVRVIRGCWLLYEKPRFQGRTIALEEGPMELV
NVWAEEVTPGALDHMGLPVPTSPMVIGSIRLAVRDYSLPRIDLFTEVNGLGRMTSFCDDT
IEICSYGNIQNTGSIKVHSGVWLVYGDPGFGGLLSVLEAGEYPCPEAWAFPQPFIGSLKT
LKMGGIKVEHPNEVKALVYERPCFEGECVEIDDDVYDFREGGEDKEGQVEEVVEEEAEGN
PVRRKTLCSVGSIKIIRGLWVGYDEPEFEGHQYLLEEGEYPDWREWGGYGDQLLSLRPVR
TDVLSPHVKLFSERDFGERGVSMDLLGPVINMEDTGFGSKTQSINVQGGVWVAFENPGFS
GELYILEKGLYGSPEDWGGPNLKISSLQPVFHDNLGGSSKFRLQLFSKPGFQGRVVVLED
SVVALEEDFFPGSCRVLAGSWVAYEGSQFTEHMYVLEEGDYPNTKSMGCLGPDSTIRSIQ
TISHEFSLPSITLFSKVGCRGRRVVLTEGVVNLQLAGVDGRIRSLVIDGGMWVLYEGCHH
RGRQILLPPSKLGDWCKFSSWPRIGSLRPLLQKQVYFRLRSRETGYVMSLSGPLDDIKLL
RVQALEETGGVDQVWLFHDGVLRCKLVEDCCLQITGSVVMAGSRLSVSPPEPGKDNQLWN
ITPDGLVRCHLKPDLVLEVKGGQSYDKTQVILNTFDERKHNQRWSLEIL
NT seq
7530 nt
NT seq
+upstream
nt +downstream
nt
atgatcagctatgacatgtcagccttcaacagcctcagtcagaacaagtccagaaataag
agctcagacagagtgttgaaccgcatcggcagttttttttccataaagaagaagaagagc
cggagcggttcactctcagcagactcagaggatggatcctggcttggtcctggctctccc
gtctccccccagtcccctggttctcctgtctccccccagtcccctggttctcctctctcc
ccccaccaacctccacaggaagactggcaaaggacccccaccaccacccggagagagggg
gaggtagtggaagccggagctaggccagtgcagggaaatttgtcagagctccaggaggag
ggatcggtgttcagtaccagctccagccctggtacctccagcctagcctctctggtggtg
gtggacagagggtaccttttgtttgcaggcagcgacagcagcgatcgtggcagcgtgagg
gaggtgcaggtgtgcagggcgagccgggccgagccagaggcagacggagaggcagacagg
aattcttggaatctgactcccacgaactcgtcctcgtccggagcagaccaagtcccaggg
ctcagccccacggaggacgtagtgggagaggcgagcaggaggctgcaggtacatctggaa
caaaccactgtgaaagacagagaggggtctggagggggcagcccagttgtccaaaacacc
ctcaggtcgtttgagctctcacaatctcaccttaaggctgacttcacctctctggtcaca
gagtctaaaaagacctccctgaaaacatctgttggagggaaggggacttacctgatggga
gtgactgtaggctctcagtcacacaccccgtcctcctcagatccccagccagagggggag
gagggggaggacagcccagccatggggaagaaaaacaggaggagggctctgaaatccacc
agcagcagctcgcctgaaacagctcccccaacacagaccatgttacatgggggagaggag
gggacgacgcaggactcaccagtgaagctacacaaagccttgtgggtggaaacacacctg
ggagaagaggagggggagaggaaggggaagaggaagattgtaaattcgcattcagtcctg
gccatacctatgactgtggcccctgtggagtaccctgatactgcaggtgtcctggccact
ttaactccttcagcagtatcagcagcagaggccagtggcagaaagccaaagccaaagctg
gctgtatctacagcgccagcctccaaggagtccaaaacaacaaacaaagcccagccagag
gcgaacagtccaggcacagactcagagagcagcacccctctagagtaccagatggccctg
agcaaagaggaaaagcgcaggagtgtgaaactgtcccgcagtgagaagattttcccaaag
aaggtgtatgtgagccctgagcccagttttgacggggacgagcagacaaaaacagagcta
gaaaataatgacatcgcagacttggcttcaaagattcctcagaagtcagaggtgaaactc
tcgccaagcccccaaaaagtttatgtagacctcaaggaaccaaacaatgactgtatcatc
actgctggggagataaccatgggtacagactctgatcaaagacaccatgaccccatggct
gtagacagttcctcaacgtccccaaccccagagctggatgaggcctctccaaccacaact
atgccaggacgtaaaacacagcccaacacaggaggttcaagggttagatgtcaggggatg
acccaggtcaccccgtctaaaccaggtgacaaagtaggcaatgtagccagtcggtcaaag
tgcccccctcctccggttggacccaagtccaaagctgtcctgggcatggctaagggaaag
ggtctgaaagatggtggaaaggcagggatttctagtggggctccatcacaaaggacacct
aaagatggcagtgagaaaacaaaggttatgtcacctacgttaaaggatcaacccaccgca
ggaaaaacagaggtcaccgacagccccaagtcgaaaattcccaaaaagtcacagacagaa
gctgtatcaaaacctccactgtcaccaggcacaacctcagtggttgatgtttcagtggct
gtgtctctacctgtgcttggttccaaaccccagaagacccctaaacctaaacatttaatg
attaaaacagacaaaaagcctatcaccgaggaggtgaatgaagtgggttcaggggggaaa
ccaattccagggcctgttacgtcagaagaggaatcacctactaaagtaccagtcatgtca
cctgtgaactcagataaggtaaacctatccaatgggatggaaaaagaccctgaggacaac
aacactgacatagccaaaacaagtgaacccaaagatgtcaaaaagcaggctcccacatgc
ccagacagcaccagcagcagcatgataccaaagagccggttacccaaagcccctgacaac
tctttgtctctggtcagaaagatgaaagacggcaaactccaaaccatcgacacagggagt
aaaactaccaagaccactgagagagcatcagttgtcaatagtaggccttccacaccaacc
agcccaaagcagcaggagcttcccagctcagaggaaatgcccccagatgagacaatgacc
actgaacctgagaagggaagcaagctgccctgccctttgcaaacaaacctgccccaacag
gcctccaataagagcaccccccgtgatgacggggacacacccacccctccctcactgtta
ccaaccaagccagagaaacccgcctcccttggacttaagaagaagagtaacatcacatct
cccaccatggacatgactgctgatgattctgggaaggcttcaccactgagtttgaaaagt
ccagtgaaagatccaagtgattctgtgactgtggctagcaagcgtgcaatgttccgtcag
gtaactccccctaaaggcaagcccagcaagcccctcaagaaatatgagcaaactatgaac
tctgaaacacaatctaaatctatacacgatcatgtgtcactggtcacagataactctcaa
atagatgatcaacaaaccacaccagcaacacaccagcaactgtttgtaaatgatcaaaca
gatgaaccagcagtcactggaacaaagaaatcactagaggacaggagcagtagtagtaca
cctgaaaaaaaaatgtataaaatatctgaaaatggacaaaaaaaatctacatcagtcaaa
actacctgtattacaaaggaacaacaaaccaaaccatacccagatctctcatccgagaca
gagagtgaccgcaactatgtggaagccttaaccagtacaccactgcagcagatgggtcct
gtaagcccaggtgtagtcctggagaaacacccaactgaaccaagcctcattgtgtctgcc
tcaagcacacctacccatgaggaagtaatatatacatcaaccaagcctgaattgactgac
cacattcatactgactctgagaaccaagctaatcagaaaagtgatgagtacaatgaaaat
acttctccagcttcagagaagctcatacttagtgctggggaagggatatccaatacgaat
cagcctgtggaacatggcctggatgtagcaaaggatagctcacccaaaaacgcctccact
gtggttgaaagaagagagagtcaagatacagcaacacagtcacccatctttggatcagag
gaaaaatctaagaaactagctaatgctcaaacccccgatatagtacctattcgtaatggc
atagtttctgatatatccatagtgtctgggaaagagactgaagtacagaaggggggagag
ccattgaaggtctccgacatcataacagagcctgcgattgttctgaaaccaattaaaaat
ggtgaggtccaactgaacaaagagcttccttcactgacacagaatttggcagatgcacat
agcgggccacacaaagaaaacaaagaggacaaactgggtgaggcggcaactaagagcaca
gttactaagatggatgcaaaacaggaatcaaagaccataactacaaaagatcagaaggag
aaagtgacaaaacaagaaagacccagcgaaggagcgactaagatattagacacaaaacag
gactcaaaatccataagaacaaaagctcaggagaagaaggtcttgctcctcaaagaaccc
cctaaaatgacaaaagcaaaccccaaggctgagctgcctcttcagctgccaacttctctg
aagctcccctctccccctaaacctctccctctgaaacaggaatctccgtccagctggctg
aacgtggagcgcggctcaaaacaggagcagaagagggagaccaagagaaggctggactgt
tcaaccagcgaggatgagagtctggctgagattgacaacgtggatgacttcatcaggagc
attaaggaactgggcaccccctttcccctgccccccaagaggcaccacgaccatgccaag
acctcctcgcccccctttgccctgcccgccatcaaggaggaccgcttcgagaaccctttt
gacgctgatggcttccagtttggcctgaaaaagaggaccaaggatgaagaaaccccggcc
atgttgataaagaaacaggccagggaggagaagacacagccaagaagggctaatgcagag
gacagccttctcttcaaggccctccagtctccatctagagcccggagaaaaccagggtgt
caaacagatgggaaagatggagaggtgaacattaaagtagaggggaagagggaagtagag
aagaaagaggagcaaggggaagaaaccggtcagctcacgtcacggctaggaaggatgtcc
ctactctccaacctattgagctcccccaggacttccagaaggaacaaaggggatccttcc
tcctcagtctctaatggtgctcctccctctcctaccacccagggcacagtgccagaaagg
gcgggttggagaagtatgaatccgggcctgagtatgggtgtggttgcaactggtgagtca
ataatcagtccttcctcacctcctcctctccccttgttcactgagctaaagctgccagat
cccctggagcagtatctcaggacagacaaaggatcctcacagagtagtgctacacagagt
acaatggctagccctgtaatgggcttaggtcacggtactggactaaagggacttacctta
ggacttcatccagccaccaaccacatcccacaggcccctctgaattgtcttcctgcagcc
aaccccaagattccagaagtgcgagggttccacaaacggcctgggaagatagtgctccat
gagcgggctcagtttgaaggagaggcctacgaggtgtttggggacgtagaagatgcctcc
atgatgaagctgtctcctgtcatctcagtcagggtcatcaggggatgctggctgctgtat
gagaagccaaggttccaggggcggaccatcgccctggaggaggggcccatggagctggtc
aacgtgtgggcagaggaggtgacaccaggggcactggatcacatgggtctgcctgtgcca
acctcacccatggtcatcggatctatccgcctggcagtgagggactacagtctacctcgg
attgacctgttcactgaagtgaatggtctggggagaatgacatccttctgcgacgacact
attgagatctgctcttatgggaacatacagaacaccggctccatcaaggtccactctgga
gtctggctggtgtatggtgacccagggtttgggggtctcttatcggtgttggaggcgggc
gagtacccctgtccagaggcctgggcattccctcagcccttcatcggatcgctgaaaaca
ctcaaaatgggtgggataaaggtggagcatcctaatgaagtaaaggctctggtgtacgag
aggccgtgcttcgagggcgagtgtgtggagattgacgatgatgtgtacgacttcagagag
ggaggagaggacaaagaggggcaggtggaggaggtggtggaggaggaggcagaaggtaat
ccagtcagaaggaagactttgtgttctgtgggatccatcaagatcattcgtggactctgg
gttggctatgatgaaccagagtttgaaggtcaccagtatctcctggaggagggggagtat
cctgactggagggagtggggaggctacggagaccagctcctgtcacttcgccctgtacgc
actgatgtcctgtctccccatgtgaagttgttcagtgagagggactttggggagagaggg
gtcagcatggacctgctagggcctgtcattaacatggaggacacaggcttcggctcgaag
acacagtccatcaatgtccagggtggagtgtgggttgcctttgagaaccctgggttctcc
ggagaactttacattctagagaaaggcctctacggaagcccagaggactggggaggaccg
aacctcaagatatcctcactgcagccagtcttccacgataacctgggtggatcaagcaag
ttcaggctccagctgttctcaaagcctgggttccagggcagagtggtggtactggaggac
agtgtggtagccctggaggaagacttcttccctggctcctgtagagtactggctgggagc
tgggtggcgtatgaaggatcccagttcacagagcacatgtatgtcctggaggagggagac
taccccaataccaagtccatgggctgtctgggtcctgactctaccatccgctccatacag
accatcagccatgagttctccctcccatccataacgttgttcagtaaggttggctgtaga
ggccgtagggtggtgctgacggaaggggtggtgaacctgcaactggctggggtggacgga
cgcatacgctccctggttatcgacggaggaatgtgggtgctgtatgaggggtgtcatcac
cgcggccgtcagatcctgctaccgcccagcaaactgggtgattggtgcaagttcagcagc
tggccgcgaatcggatccctgcgaccactattgcagaagcaggtgtacttccgtctgcga
agcagggagacgggctacgtgatgtccctgtcagggcctctggatgacatcaagctgttg
cgggtccaggccctggaggagactgggggagtggaccaggtctggctcttccatgacgga
gtcctacgctgcaagctggtggaggactgttgcctgcagatcacggggagcgttgtcatg
gcgggcagcaggctgagtgtgtctcctccggagccagggaaagacaaccagctgtggaac
attaccccagacggcctggtccgatgccacctcaaacctgatctggtgcttgaggttaaa
ggtggacaaagttatgacaaaactcaagtgattctcaacacatttgatgagagaaaacac
aaccaaagatggtctttggagatcctgtaa
DBGET
integrated database retrieval system
